Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09491
- Subject:
- XM_011525804.2
- Aligned Length:
- 4980
- Identities:
- 1535
- Gaps:
- 3444
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCGGAATGTGAGGCGGGTGAGGATCAGACACGATGGCAAAGGCTCCGGCAGCGGCTGGTACCTGGACAGAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTGGTGAGAGAGGAGGGGCAGCCTGAGAGCGACAACGTGGAGTTCCCATGTCTCAGGTGGTTGGACAAGGATA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGATGATGGGCAGCTGGTCCGAGAGTTGCTACCCAGTGACAGCAGCGCGACACTGAAGAACTTTCGCTATCAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATCAGCTTGAAGACTGGGGATGTCTCTGGGGCCAGCACGGATTCTAGAGTCTACATCAAGCTCTATGGGGATAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATCTGACACCATCAAGCAAGTTCTTCTTGTCTCTGACAACAACCTCAAAGACTACTTTGAACGTGGCCGGGTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAGTTCACCCTCGAGACCCTGAACATTGGAAATATCAACCGGCTGGTGATTGGGCATGACAGCACTGGCATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATGCCAGCTGGTTCCTGGGCAGCGTTCAGATCCGTGTGCCCCGTCAAGGCAAGCAGTACACCTTTCCCGCCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCGCTGGCTGGACAAGAACCAGGCTGACGGGCGCCTGGAGGTGGAGCTGTATCCCAGCGAGGTGGTGGAGATCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAAATTGGTCCACTATGAGGTTGAGATTTGGACAGGAGATGTGGGTGGCGCAGGCACCAGTGCCCGAGTCTAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATGCAGATCTATGGAGAGAAAGGCAAGACAGAAGTGCTCTTCCTCTCCAGCCGCTCAAAAGTTTTTGAACGGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTCCAAGGACACATTCCAGCTTGAGGCGGCCGACGTGGGCGAGGTCTATAAGCTCCGGCTCGGGCACACGGGCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGGCTTTGGGCCCAGCTGGTTCGTGGACACCGTGTGGCTGCGGCACCTGGTGGTGCGGGAGGTGGACCTCACG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCGGAGGAGGAGGCCCGGAAGAAGAAGGAGAAGGACAAGCTGCGGCAGCTGCTCAAGAAGGAGCGGCTGAAGGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAAGCTGCAGAGGAAGAAGAAGAAGAGGAAGGGCAGCGACGAAGAGGACGAGGGGGAGGAAGAGGAGTCGTCCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATCAGAGGAGTCCTCGTCAGAGGAGGAGGAGATGGAAGAAGAGGAGGAAGAGGAGGAGTTTGGGCCGGGGATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGGAGGTGATTGAGCAGCACAAGTTCGAAGCCCACCGCTGGCTGGCCCGGGGCAAGGAGGACAACGAACTTGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CGTGGAGTTGGTGCCAGCTGGCAAGCCGGGTCCTGAGCGAAACACCTATGAGGTTCAGGTGGTCACGGGGAATG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGCCCAAGGCCGGCACTGATGCTAACGTCTACCTAACCATCTACGGCGAGGAGTATGGAGACACGGGCGAACGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCCCTGAAGAAGTCAGACAAGTCCAACAAATTTGAGCAGGGGCAGACAGACACCTTCACCATCTATGCCATTGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCTGGGGGCCCTGACCAAGATTCGGATTCGCCACGACAACACAGGCAACAGAGCAGGCTGGTTCCTGGACAGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TAGACATTACTGACATGAACAACGAGATCACGTACTACTTTCCATGCCAACGTTGGCTGGCAGTGGAGGAAGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GATGGCCAGCTGTCCAGGGAGCTGTTGCCAGTGGATGAGTCCTATGTGCTGCCACAGAGCGAGGAGGGTAGGGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGGCGGTGACAACAACCCCCTCGACAACCTGGCCCTGGAGCAGAAAGATAAATCTACCACATTCTCAGTGACCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TAAAGACTGGGGTTAAGAAGAATGCGGGCACAGATGCTAATGTCTTCATCACACTCTTTGGCACACAGGATGAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACTGGAATGACCCTCCTGAAGTCCTCCAAGACAAACAGCGATAAGTTTGAGAGGGACAGCATTGAAATCTTCAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGTGGAGACGCTGGATCTGGGAGACCTGTGGAAAGTCCGGCTTGGCCATGACAACACAGGCAAGGCCCCAGGCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGTTTGTAGACTGGGTAGAGGTGGATGCCCCATCTCTTGGGAAGTGCATGACGTTTCCCTGTGGCCGCTGGCTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCCAAAAACGAAGACGACGGGTCCATCATCAGAGACCTCTTCCATGCAGAGCTTCAGACGAGGCTGTACACACC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATTTGTTCCTTACGAGATCACCCTCTACACCAGTGATGTCTTTGCTGCTGGGACAGATGCCAACATCTTCATCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCATCTATGGCTGCGATGCCGTGTGCACCCAGCAGAAGTATCTGTGTACCAACAAGAGGGAACAGAAGCAGTTC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTTGAGAGGAAGTCTGCCTCCCGCTTCATCGTAGAGTTAGAAGATGTGGGAGAAATCATTGAAAAAATTCGGAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGGCCATAATAACACGGGCATGAATCCTGGGTGGCACTGCTCTCACGTGGACATCCGCAGGCTCCTCCCGGATA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAGACGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAAAAGACCATT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CGAGAACTGGTTCCATATGACATCTTCACTGAGAAATACATGAAAGATGGGTCCTTACGGCAAGTCTACAAGGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AGTAGAAGAGCCTCTGGACATTGTGCTGTACTCGGTGCAGATCTTCACAGGGAACATTCCTGGGGCAGGGACGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATGCCAAGGTGTACATCACCATCTATGGAGACCTCGGGGACACTGGGGAGCGATACCTTGGCAAGTCAGAGAAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CGGACCAACAAGTTCGAGAGAGGAACGGCTGACACCTTCATCATCGAGGCCGCTGACCTAGGCGTCATCTACAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GATCAAGCTCCGCCATGACAACTCCAAGTGGTGCGCAGACTGGTACGTGGAGAAGGTGGAGATCTGGAATGACA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CCAACGAGGACGAGTTCCTGTTCCTATGCGGGCGCTGGCTCTCCCTGAAGAAGGAGGATGGGCGACTCGAGAGG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTCTTTTACGAGAAGGAGTACACTGGGGACCGCAGCAGCAACTGCAGCAGCCCTGCTGACTTCTGGGAGATCGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCTGAGCTCCAAGATGGCCGATGTCGACATCAGCACAGTGACCGGGCCCATGGCTGACTACGTTCAAGAGGGCC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CAATTATTCCCTACTATGTGTCAGTCACCACTGGGAAGCACAAGGACGCGGCCACTGACAGCCGAGCCTTCATC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTTCTCATCGGGGAGGATGATGAACGTAGTAAGCGCATCTGGTTGGACTACCCCCGAGGGAAGAGGGGCTTCAG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CCGTGGCTCTGTGGAGGAGTTCTACGTCGCAGGCTTGGATGTGGGCATCATCAAGAAAATAGAGCTGGGCCATG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ACGGGGCCTCCCCTGAGAGCTGCTGGCTGGTGGAAGAGTTGTGTTTGGCAGTGCCCACCCAGGGCACCAAGTAC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 ATGTTGAACTGTAACTGCTGGCTGGCCAAGGACAGAGGCGACGGCATCACCTCCCGTGTCTTCGACCTCTTGGA 3404
Query 1 ----------------------------------------ATGACGGTGTGGACAGGGGATGTGGTTGGCGGGG 34
||||||||||||||||||||||||||||||||||
Sbjct 3405 TGCCATGGTGGTGAACATTGGGGTGAAGGTTCTCTATGAAATGACGGTGTGGACAGGGGATGTGGTTGGCGGGG 3478
Query 35 GCACTGACTCCAACATCTTCATGACCCTCTACGGCATCAACGGGAGCACAGAGGAGATGCAGCTGGACAAAAAG 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 GCACTGACTCCAACATCTTCATGACCCTCTACGGCATCAACGGGAGCACAGAGGAGATGCAGCTGGACAAAAAG 3552
Query 109 AAAGCCAGGTTTGAGCGGGAGCAGAACGACACCTTCATCATGGAGATCCTAGACATTGCTCCATTCACCAAGAT 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 AAAGCCAGGTTTGAGCGGGAGCAGAACGACACCTTCATCATGGAGATCCTAGACATTGCTCCATTCACCAAGAT 3626
Query 183 GCGGATCCGGATTGATGGCCTGGGCAGTCGGCCGGAGTGGTTCCTGGAGAGGATCCTACTGAAGAACATGAACA 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 GCGGATCCGGATTGATGGCCTGGGCAGTCGGCCGGAGTGGTTCCTGGAGAGGATCCTACTGAAGAACATGAACA 3700
Query 257 CTGGAGACCTGACCATGTTCTACTATGGAGACTGGCTGTCCCAGCGGAAGGGCAAGAAGACCCTGGTGTGTGAA 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 CTGGAGACCTGACCATGTTCTACTATGGAGACTGGCTGTCCCAGCGGAAGGGCAAGAAGACCCTGGTGTGTGAA 3774
Query 331 ATGTGTGCCGTTATCGATGAGGAAGAAATGATGGAGTGGACCTCCTACACCGTCGCAGTTAAGACCAGCGACAT 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 ATGTGTGCCGTTATCGATGAGGAAGAAATGATGGAGTGGACCTCCTACACCGTCGCAGTTAAGACCAGCGACAT 3848
Query 405 CCTGGGAGCAGGCACTGATGCCAACGTGTTCATCATCATCTTCGGGGAGAACGGGGATAGTGGGACACTGGCCC 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 CCTGGGAGCAGGCACTGATGCCAACGTGTTCATCATCATCTTCGGGGAGAACGGGGATAGTGGGACACTGGCCC 3922
Query 479 TGAAGCAGTCGGCAAACTGGAACAAGTTTGAGCGGAACAACACGGACACATTCAACTTCCCTGACATGCTGAGC 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923 TGAAGCAGTCGGCAAACTGGAACAAGTTTGAGCGGAACAACACGGACACATTCAACTTCCCTGACATGCTGAGC 3996
Query 553 TTGGGCCACCTCTGCAAGCTGAGGGTCTGGCACGACAACAAAGGGATATTTCCTGGCTGGCATCTGAGCTATGT 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 TTGGGCCACCTCTGCAAGCTGAGGGTCTGGCACGACAACAAAGGGATATTTCCTGGCTGGCATCTGAGCTATGT 4070
Query 627 CGATGTGAAGGACAACTCCCGCGACGAGACCTTCCACTTCCAGTGTGACTGCTGGCTCTCCAAGAGTGAGGGTG 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071 CGATGTGAAGGACAACTCCCGCGACGAGACCTTCCACTTCCAGTGTGACTGCTGGCTCTCCAAGAGTGAGGGTG 4144
Query 701 ACGGGCAGACGGTCCGCGACTTTGCCTGTGCCAACAACAAGATCTGTGATGAGCTGGAAGAGACCACCTACGAG 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145 ACGGGCAGACGGTCCGCGACTTTGCCTGTGCCAACAACAAGATCTGTGATGAGCTGGAAGAGACCACCTACGAG 4218
Query 775 ATCGTCATAGAAACGGGCAACGGAGGCGAAACCAGGGAGAACGTCTGGCTCATCCTGGAGGGCAGGAAGAACCG 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4219 ATCGTCATAGAAACGGGCAACGGAGGCGAAACCAGGGAGAACGTCTGGCTCATCCTGGAGGGCAGGAAGAACCG 4292
Query 849 ATCCAAAGAGTTTCTCATGGAAAATTCTTCTAGGCAGCGGGCCTTTAGGAAGGGGACCACAGACACGTTTGAGT 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4293 ATCCAAAGAGTTTCTCATGGAAAATTCTTCTAGGCAGCGGGCCTTTAGGAAGGGGACCACAGACACGTTTGAGT 4366
Query 923 TTGACAGCATCTACTTGGGGGACATTGCCTCCCTCTGTGTGGGCCACCTTGCCAGGGAAGACCGGTTTATCCCC 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4367 TTGACAGCATCTACTTGGGGGACATTGCCTCCCTCTGTGTGGGCCACCTTGCCAGGGAAGACCGGTTTATCCCC 4440
Query 997 AAGAGAGAACTTGTCTGGCATGTCAAGACCATCACCATCACCGAGATGGAGTACGGCAATGTGTACTTCTTTAA 1070
|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441 AAGAGAGAACTTGCCTGGCATGTCAAGACCATCACCATCACCGAGATGGAGTACGGCAATGTGTACTTCTTTAA 4514
Query 1071 CTGTGACTGCCTCATCCCCCTCAAGAGGAAGAGGAAGTACTTCAAGGTATTCGAGGTTACCAAGACGACAGAGA 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4515 CTGTGACTGCCTCATCCCCCTCAAGAGGAAGAGGAAGTACTTCAAGGTATTCGAGGTTACCAAGACGACAGAGA 4588
Query 1145 GCTTTGCCAGCAAGGTCCAGAGCCTGGTGCCCGTCAAGTACGAAGTCATCGTGACAACAGGCTATGAGCCAGGG 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589 GCTTTGCCAGCAAGGTCCAGAGCCTGGTGCCCGTCAAGTACGAAGTCATCGTGACAACAGGCTATGAGCCAGGG 4662
Query 1219 GCAGGCACTGATGCCAACGTCTTCGTGACCATCTTTGGGGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGCA 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4663 GCAGGCACTGATGCCAACGTCTTCGTGACCATCTTTGGGGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGCA 4736
Query 1293 GAAAATGCGCAACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCCTGGAGACGCTGGAGCTGGGTGAGCTGC 1366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4737 GAAAATGCGCAACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCCTGGAGACGCTGGAGCTGGGTGAGCTGC 4810
Query 1367 GCAAGGTGCGCCTGGAGCACGACAGCAGTGGCTACTGCTCAGGCTGGCTGGTGGAGAAGGTGGAGGTCACCAAC 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4811 GCAAGGTGCGCCTGGAGCACGACAGCAGTGGCTACTGCTCAGGCTGGCTGGTGGAGAAGGTGGAGGTCACCAAC 4884
Query 1441 ACCAGCACCGGCGTGGCCACCATCTTCAACTGTGGCAGGTGGCTGGACAAGAAGCGGGGGGATGGACTCACCTG 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4885 ACCAGCACCGGCGTGGCCACCATCTTCAACTGTGGCAGGTGGCTGGACAAGAAGCGGGGGGATGGACTCACCTG 4958
Query 1515 GAGAGACCTCTTCCCTTCTGTC 1536
||||||||||||||||||||||
Sbjct 4959 GAGAGACCTCTTCCCTTCTGTC 4980
