Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09518
Subject:
XR_001755161.1
Aligned Length:
2263
Identities:
802
Gaps:
1448

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCCACCCAAGCTGCTGTGTGCAGGAAGGTGTGTGGGCCAGGACGGGGCTGCACAGGCCTGGCACTGCCCTCCAG  74

Query    1  ---------------------ATGTGCATCATCTTCTTTAAGTTTGATCCTCGC------------CCTG----  37
                                 |||           ||.|.||..||  ||||.|            ||.|    
Sbjct   75  GACAGGGTCACTCAGTGTGGGATG-----------CTGTCAGAATG--CCTCTCGGGGCGGGGACTCCAGTCAA  135

Query   38  TTTCCAAAAACGCG-----------------------TACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCT  88
            |.|.||||.|||.|                       .||||||||||||||||||||||||||||||||||||
Sbjct  136  TGTACAAAGACGTGAAGACTCAGCCACAGAAGGCAGCCACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCT  209

Query   89  ACAGCCGACCCTCCAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAA  162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  210  ACAGCCGACCCTCCAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAA  283

Query  163  GGCAAGGAAGGAGGCACATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCC  236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  284  GGCAAGGAAGGAGGCACATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCC  357

Query  237  GCAGCTGGACTGGCAGGCCCGAGGGCGAGGTGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGT  310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  358  GCAGCTGGACTGGCAGGCCCGAGGGCGAGGTGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGT  431

Query  311  CCTACCTGAAGAAGGTCTCTATGGAGGGCCATCTGTACAATGGCTTCAACCTCATAGCAGCCAACCTGAGCACA  384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  432  CCTACCTGAAGAAGGTCTCTATGGAGGGCCATCTGTACAATGGCTTCAACCTCATAGCAGCCGACCTGAGCACA  505

Query  385  GCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTATCGTTTTGACGC----------  448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct  506  GCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGGCCTCT  579

Query  449  ------------------------CAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAG  498
                                    ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  580  GCATGGCCCGCTGATTGCTCCTCACAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAG  653

Query  499  CTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGC  572
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  654  CTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGC  727

Query  573  CAGCCTCCTGGATGTGCTCAACAATAAAGAGGCGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGT  646
            |||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  728  CAGCCTCCTGGATGTGCTCAACAATGAAGAGGCGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGT  801

Query  647  ACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACT  720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  802  ACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACT  875

Query  721  ATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTG  794
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  876  ATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTG  949

Query  795  GGAGACCAGAACCTATGAGTTCACACTGCAGAGC----------------------------------------  828
            ||||||||||||||||||||||||||||||||||                                        
Sbjct  950  GGAGACCAGAACCTATGAGTTCACACTGCAGAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGG  1023

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1024  CCCTGCCTTGAGGGGCACTGTGGACAGGAAACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGGCCA  1097

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1098  GCATCCCCCGGATCAGGGCCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCT  1171

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1172  TTATGCCAGTGAGGAGCAGCAGAGTCTGATACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGGATA  1245

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1246  CACCTGAGCCCACTCTTGCACATGTACACAGGCACTCACATGGCACACACATACACTCCTGCGTGTGCACAAGC  1319

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1320  ACACACATGCAAGCCATATACATGGACACCGACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTGCAC  1393

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1394  ACATGCACAGTTGCACAGACACACACACACAGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACTCTC  1467

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1468  ACCTCTCATGTGCTTCTGGCCAGTAGGTCTTTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAGCGG  1541

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1542  CCCCTCCTCTCCTGTGGCCACAGAACACAGGCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAGGAG  1615

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1616  ACAGCCACATTTGGAATTGGGCACCGAGAAGACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAGACG  1689

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1690  GAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAAGTT  1763

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1764  CAAGCAATTCTCCTGCCCCAGCCTCCTGATTAGCTGGGATTACAGGCGTGTGCCACCATGCCCAGCTAATTTTT  1837

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1838  GTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACGTGGTGATCCACCTG  1911

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1912  CCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCATAACAG  1985

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1986  AAGTGCAGACTCATTGCTAGATTCAGTGCCCTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCCTGTGT  2059

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2060  GTGCCAGGAGGCTCCGTGTGCACCAGGGGCTCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCTGGCAG  2133

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2134  CCCCATCTCAGCCAGCCCTGCTCTCTCCCTCTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTACCTGAA  2207

Query  829  -------------------------------------------  828
                                                       
Sbjct 2208  TGTGAGCTCCTGATAATAAAACTCTGAGGCTTTGGTGAGCGCA  2250

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