Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09677
- Subject:
- NR_148057.2
- Aligned Length:
- 3257
- Identities:
- 925
- Gaps:
- 2318
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGTGTCAACGAGCCCCCGAACGGTTCCGCCTCATTCCCTCTCTGTGTGCCTCGCAAGTCTCTGCTTAGTAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGTCACAGCTTCGGCGCGCGAGAGTGGCGTTGGCACGTCCAAACCCCGGGGTCCTCGGCCAGGCCAGGGGGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGCGTGCGGCGGGGCCGGGCCGGGCCGGGCGCGCCCAGCGGGCTCCGGGCACACGCCCCTCACCTGGGCGAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCGGTGCGCAGGCGCTCAGCGCGGGGGCAGCGGCCGGGCGCTTAAGCCCGGCGCGGGCAAGAGTTGGACAGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGGGGCCGCGCCGGGCCGAGCTGTCGCCCGCGCCACCTCCACCGCCGCCGCTGCTACCGCCACCGCCACCGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGGCTGCAGCAGATCGCGGGAGAACGTCTGCGCGAAGCCCCGGTGCAGCCCTGGCGGGACCGCAGCAACCACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGAGCGTGAGCAACAGCTTCCCGGCTGGAGGAGCCACTGCCCCACGCGCCCGCGGCCCGCGCGCCGAGATGTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TACATTTCAACTCCATCAAATATTAAATTGATGTTTATGGGCTAACCTGGAAACCGAAAAACAGTTTGTTTCAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TACAAGAATAAGAAAATATGTCCAAATTCCTGTCAGCTGACTTATAAAGGGACTTTTAGAACACAACCCAATGC 666
Query 1 ATGATGCA-TCCTT---CACTG--------------GAT---ATCA--AACCATTTATGTC---TTTTC----- 43
||||.|.| ||||| |.||| ||| |||| || ||||.| |||||
Sbjct 667 ATGAGGTACTCCTTAAGCCCTGACAACCATCTTGAAGATGGAATCATGAA-----TATGGCAAATTTTCTACGG 735
Query 44 ------------CAGTGGA-----------------------CAGTAG------------------------TT 58
.||.||| ||||.| ||
Sbjct 736 GGCTTTGAAGAAAAGGGGATAAAGAACGACAGGCCTGAGGACCAGTTGAGCAAAGAGAAAAAGAAAATTCTTTT 809
Query 59 CTGCTGTTG------------------------------------GGCT------CTTTC------CAAAT--- 81
||.||..|| |||| |.||| |||||
Sbjct 810 CTCCTTCTGTGAGGTGTGCAACATCCAGCTGAACTCTGCAGCCCAGGCTCAGGTGCATTCCAACGGCAAATCCC 883
Query 82 -----------TTTAA---------------------------------------------------------- 86
.|.||
Sbjct 884 ACCGCAAACGAGTGAAGCAGCTGAGTGATGGGCAGCCCCCACCACCCGCCCAGGCCAGCCCCAGCAGCAACAGC 957
Query 87 --CACA-ATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCATTCCCCCAAAGAAGAAAC 157
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 AGCACAGATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCATTCCCCCAAAGAAGAAAC 1031
Query 158 AAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATAGCCAGGCCGAGGCCCACTACAAAGGAAGT 231
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032 AAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGAT------------------------------ 1075
Query 232 AAACATGCCAAGAAGGTCAAAGCACTAGACGCAACGAAAAATAAACCCAAAATGGTTCCTTCCAAGGACAGCGC 305
Sbjct 1076 -------------------------------------------------------------------------- 1075
Query 306 AAAGGCTAATCCCAGCTGCTCCATCACTCCAATCACAGGCAACAACTCTGACAAATCAGAAGATAAAGGGAAGT 379
|||||||||||||||
Sbjct 1076 -----------------------------------------------------------AAGATAAAGGGAAGT 1090
Query 380 TAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCTCATTTATCCTCAAATCTGGCACAACACCC 453
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1091 TAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCTCATTTCTCCTCAAATCTGGCACAACACCC 1164
Query 454 CTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGA 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1165 CTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGA 1238
Query 528 AGAAAAAGCCAAAAAATTACTTTATTGTTCACTATGCAAAGTGGCTGTGAACTCCCTGTCACAGCTAGAGGCAC 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1239 AGAAAAAGCCAAAAAATTACTTTATTGTTCACTATGCAAAGTGGCTGTGAACTCCCTGTCACAGCTAGAGGCAC 1312
Query 602 ACAACACAGGATCTAAACACAAGACCATGGTTGAAGCTCGTAATGGGGCTGGTCCAATTAAATCCTATCCTAGA 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1313 ACAACACAGGATCTAAACACAAGACCATGGTTGAAGCTCGTAATGGGGCTGGTCCAATTAAATCCTATCCTAGA 1386
Query 676 CCTGGATCAAGATTAAAGATGCAGAATGGCAGTAAGGGGTCAGGACTACAGAACAAGACATTTCATTGTGAAAT 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1387 CCTGGATCAAGATTAAAGATGCAGAATGGCAGTAAGGGGTCAGGACTACAGAACAAGACATTTCATTGTGAAAT 1460
Query 750 CTGTGATGTTCATGTTAATTCAGAAATTCAACTCAAACAGCACATTTCTAGCCGAAGGCATAAAGATCGAGTTG 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1461 CTGTGATGTTCATGTTAATTCAGAAATTCAACTCAAACAGCACATTTCTAGCCGAAGGCATAAAGATCGAGTTG 1534
Query 824 CAGGGAAACCACTGAAGCCAAAATACAGCCCTTACAACAAACTCCAGCGGAGCCCGAGTATTCTAGCAGCAAAA 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1535 CAGGGAAACCACTGAAGCCAAAATACAGCCCTTACAACAAACTCCAGCGGAGCCCGAGTATTCTAGCAGCAAAA 1608
Query 898 CTTGCATTCCAGAAAGATATGATGAAGCCTTTGGCCCCAGCCTTCCTGTCCTCACCTCTCGCAGCGGCGGCAGC 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1609 CTTGCATTCCAGAAAGATATGATGAAGCCTTTGGCCCCAGCCTTCCTGTCCTCACCTCTCGCAGCGGCGGCAGC 1682
Query 972 CGTGTCCTCAGCGCTGTCACTCCCACCCCGGCCCTCTGCCTCGCTCTTCCAGGCTCCAGCCATTCCTCCAGCTC 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1683 CGTGTCCTCAGCGCTGTCACTCCCACCCCGGCCCTCTGCCTCGCTCTTCCAGGCTCCAGCCATTCCTCCAGCTC 1756
Query 1046 TTCTGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGTAC------------ 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1757 TTCTGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGTACTAACGTCTGCAA 1830
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 1831 ACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCACAAGGATTCAGCAATTTAAGCAGTTTGTG 1904
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 1905 TTGCAGTACCCCCCATTCACCCACAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCAC 1978
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 1979 TAGATTGACGAGGGCTTTTAGAGACTGCTCCTATAATTGAGGAATCAGCAGCATAGGCTTTATCTCCCTACTTC 2052
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2053 CTCCCCCACCCTACCGCGTTCAATTTGTGTATCTCAGATATTTGATTTCTTGAGCATGTATTGGTCAGAAAGAA 2126
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2127 AAAGAAAGAAAACCATTCTCTATTTTTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACA 2200
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2201 GACTTGAAAACTAGGATCTTCCTCAGATGTCTGTAAATAACTCTGGTATCCAACTGGGTGTATTCTAGTGTGGA 2274
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2275 ACAAAAAACAGTGAACACAAGTGCTTACTTGTGGATACTATCTTACCAACGGATCACAAAGTTCTCTTTTTGGT 2348
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2349 GTACTGTTGTTGACAGGGATTGTGTACTGTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTA 2422
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2423 TCTCTTGTCTGAATTAAACATTTTTAGTTGCTGTGTAAATGTTAGGAAGCAAAGTAGCTTTGAATTTTCTCTGT 2496
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2497 AAGAGAATAAAAGATAAAATAATGTATTTTCTTTATTTCACATTTTATTTGGAGATATTTAAATGAAATAGAAA 2570
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2571 GCCATATAACATAGCTATAATTACTACCTGTTTGCTATTTTTGTTTAACTTATTTTGTAGCTTCCTCACTGGTT 2644
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2645 TGTGTTGCTAAGCAAACGTATACAAACAGAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATT 2718
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2719 CTGCAAGAAGACAATGAATCCATGTATTTCTATATAAGTATCTTCTTCATTTTTAACCTGTTTTCATTTGTAAT 2792
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2793 GATGCTACATAATTTTGTGGCTCCCTAATGCAATAATGTACAGAAGATAAAAAAATTTATAATTGAACAATTTG 2866
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2867 TCTTTCTGTTCGCTGAATATATTGCAGGTCATGCTCCCATGCCCCCCTTTCTAAGCCGATATCAACAAGACTGG 2940
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2941 AATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATAT 3014
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 3015 CTGCAACCTGTAAATGGTAAAATGTCTGTGTATTTTTTTAAATGTACCTTTTCAATAAAAGTACAAAAAATAAA 3088
Query 1108 - 1107
Sbjct 3089 A 3089
