Construct: ORF ccsbBroadEn_09677

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014549.1_s300c1, BRDN0000389123
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF385B (151126)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 151126 ZNF385B zinc finger protein 385B NM_001113398.3 99.8% 99.4% 9G>T;430C>A
2 human 151126 ZNF385B zinc finger protein 385B NM_001282725.2 99.8% 99.4% 9G>T;430C>A
3 human 151126 ZNF385B zinc finger protein 385B NM_001352813.1 99.8% 99.4% 9G>T;430C>A
4 human 151126 ZNF385B zinc finger protein 385B NM_001352814.2 99.8% 99.4% 9G>T;430C>A
5 human 151126 ZNF385B zinc finger protein 385B NM_001352815.1 99.8% 99.4% 9G>T;430C>A
6 human 151126 ZNF385B zinc finger protein 385B NM_001352816.2 93.6% 91.9% (many diffs)
7 human 151126 ZNF385B zinc finger protein 385B NM_001113397.2 93.2% 92.9% 1_78del;87G>T;508C>A
8 human 151126 ZNF385B zinc finger protein 385B XM_011510721.3 93% 92.6% 9G>T;363_443del;511C>A
9 human 151126 ZNF385B zinc finger protein 385B NM_001352817.1 91.7% 91.5% 0_1ins90;340C>A
10 human 151126 ZNF385B zinc finger protein 385B NM_001352812.2 91.3% 91% (many diffs)
11 human 151126 ZNF385B zinc finger protein 385B XM_011510719.2 90% 89.7% (many diffs)
12 human 151126 ZNF385B zinc finger protein 385B XM_011510720.2 90% 89.7% (many diffs)
13 human 151126 ZNF385B zinc finger protein 385B XM_011510716.2 85.8% 85.5% (many diffs)
14 human 151126 ZNF385B zinc finger protein 385B XM_011510717.2 85.8% 85.5% (many diffs)
15 human 151126 ZNF385B zinc finger protein 385B NM_001352808.2 75.7% 75.5% 1_351del;360G>T;781C>A
16 human 151126 ZNF385B zinc finger protein 385B NM_152520.6 75.7% 75.5% 1_351del;360G>T;781C>A
17 human 151126 ZNF385B zinc finger protein 385B NM_001352811.2 73.8% 73.5% (many diffs)
18 human 151126 ZNF385B zinc finger protein 385B NM_001352810.2 71.7% 71.5% (many diffs)
19 human 151126 ZNF385B zinc finger protein 385B XM_011510713.3 70% 69.7% (many diffs)
20 human 151126 ZNF385B zinc finger protein 385B NM_001352809.2 69.2% 68.9% 1_489del;498G>T;919C>A
21 human 151126 ZNF385B zinc finger protein 385B NR_104234.1 56.8% (many diffs)
22 human 151126 ZNF385B zinc finger protein 385B NR_148055.2 35.9% (many diffs)
23 human 151126 ZNF385B zinc finger protein 385B XM_017003441.2 33% 25.1% (many diffs)
24 human 151126 ZNF385B zinc finger protein 385B XM_011510723.2 32.2% 24.5% (many diffs)
25 human 151126 ZNF385B zinc finger protein 385B NR_148056.2 32.2% (many diffs)
26 human 151126 ZNF385B zinc finger protein 385B NR_148058.2 31.8% (many diffs)
27 human 151126 ZNF385B zinc finger protein 385B NR_148059.1 29.3% (many diffs)
28 human 151126 ZNF385B zinc finger protein 385B NR_148057.2 28.4% (many diffs)
29 human 151126 ZNF385B zinc finger protein 385B NR_148054.2 27.7% (many diffs)
30 mouse 241494 Zfp385b zinc finger protein 385B NM_001113400.1 89.3% 94% (many diffs)
31 mouse 241494 Zfp385b zinc finger protein 385B XM_017318085.1 84.5% 88.9% (many diffs)
32 mouse 241494 Zfp385b zinc finger protein 385B NM_001113399.1 83.4% 87.8% (many diffs)
33 mouse 241494 Zfp385b zinc finger protein 385B XM_006499461.3 80.2% 84.4% (many diffs)
34 mouse 241494 Zfp385b zinc finger protein 385B XM_006499462.3 80.2% 84.4% (many diffs)
35 mouse 241494 Zfp385b zinc finger protein 385B XM_006499463.3 80.2% 84.4% (many diffs)
36 mouse 241494 Zfp385b zinc finger protein 385B XM_006499460.3 76.3% 80.3% (many diffs)
37 mouse 241494 Zfp385b zinc finger protein 385B XM_006499458.3 75.4% 79.4% (many diffs)
38 mouse 241494 Zfp385b zinc finger protein 385B XM_006499457.3 74.9% 78.8% (many diffs)
39 mouse 241494 Zfp385b zinc finger protein 385B NM_178723.6 68.2% 71.8% (many diffs)
40 mouse 241494 Zfp385b zinc finger protein 385B XM_006499456.3 66.4% 69.9% (many diffs)
41 mouse 241494 Zfp385b zinc finger protein 385B XM_006499455.3 62.7% 66% (many diffs)
42 mouse 241494 Zfp385b zinc finger protein 385B XM_006499464.2 21.6% 22.2% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1173
ORF length:
1107
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAT GCATCCTTCA CTGGATATCA AACCATTTAT GTCTTTTCCA GTGGACAGTA
121GTTCTGCTGT TGGGCTCTTT CCAAATTTTA ACACAATGGA TCCTGTGCAA AAAGCGGTTA
181TTAACCATAC ATTTGGAGTA TCCATTCCCC CAAAGAAGAA ACAAGTTATT TCTTGTAATG
241TCTGTCAGCT TCGCTTTAAC TCAGATAGCC AGGCCGAGGC CCACTACAAA GGAAGTAAAC
301ATGCCAAGAA GGTCAAAGCA CTAGACGCAA CGAAAAATAA ACCCAAAATG GTTCCTTCCA
361AGGACAGCGC AAAGGCTAAT CCCAGCTGCT CCATCACTCC AATCACAGGC AACAACTCTG
421ACAAATCAGA AGATAAAGGG AAGTTAAAAG CCAGCAGTTC CAGTCAGCCA TCAAGCTCTG
481AAAGTGGCTC ATTTATCCTC AAATCTGGCA CAACACCCCT GCCACCTGGA GCAGCCACTT
541CTCCCTCCAA GAGCACAAAT GGAGCTCCCG GTACTGTTGT TGAATCAGAA GAAGAAAAAG
601CCAAAAAATT ACTTTATTGT TCACTATGCA AAGTGGCTGT GAACTCCCTG TCACAGCTAG
661AGGCACACAA CACAGGATCT AAACACAAGA CCATGGTTGA AGCTCGTAAT GGGGCTGGTC
721CAATTAAATC CTATCCTAGA CCTGGATCAA GATTAAAGAT GCAGAATGGC AGTAAGGGGT
781CAGGACTACA GAACAAGACA TTTCATTGTG AAATCTGTGA TGTTCATGTT AATTCAGAAA
841TTCAACTCAA ACAGCACATT TCTAGCCGAA GGCATAAAGA TCGAGTTGCA GGGAAACCAC
901TGAAGCCAAA ATACAGCCCT TACAACAAAC TCCAGCGGAG CCCGAGTATT CTAGCAGCAA
961AACTTGCATT CCAGAAAGAT ATGATGAAGC CTTTGGCCCC AGCCTTCCTG TCCTCACCTC
1021TCGCAGCGGC GGCAGCCGTG TCCTCAGCGC TGTCACTCCC ACCCCGGCCC TCTGCCTCGC
1081TCTTCCAGGC TCCAGCCATT CCTCCAGCTC TTCTGAGGCC TGGGCATGGG CCCATCCGCG
1141CCACTCCTGC CTCCATCCTC TTTGCTCCGT ACTACCCAAC TTTCTTGTAC AAAGTtggca
1201ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)