Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09677
- Subject:
- XM_011510713.3
- Aligned Length:
- 1578
- Identities:
- 1105
- Gaps:
- 471
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGTACTCCTTAAGCCCTGACAACCATCTTGAAGATGGAATCATGAATATGGCAAATTTTCTACGGGGCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAAGAAAAGGGGATAAAGAACGACAGGCCTGAGGACCAGTTGAGCAAAGAGAAAAAGAAAATTCTTTTCTCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTGTGAGGTGTGCAACATCCAGCTGAACTCTGCAGCCCAGGCTCAGGTGCATTCCAACGGCAAATCCCACCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACGAGTGAAGCAGCTGAGTGATGGGCAGCCCCCACCACCCGCCCAGGCCAGCCCCAGCAGCAACAGCAGCAC 296
Query 1 -------------------------------------------------------ATGATGCATCCTTCACTGG 19
||||||||.||||||||||
Sbjct 297 AGGCAGTACATGCCACACTACTACCCTTCCTGCTCTTGTGCGCACACCTACCCTGATGATGCAGCCTTCACTGG 370
Query 20 ATATCAAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACA--- 90
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATATCAAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACAAAA 444
Query 91 ------------------------------------ATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATT 128
||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGAAGAGGCTTATTTGAGACCAATAAATTTTGCCAGATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATT 518
Query 129 TGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATA 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATA 592
Query 203 GCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCACTAGACGCAACGAAAAATAAA 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCACTAGACGCAACGAAAAATAAA 666
Query 277 CCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCACTCCAATCACAGGCAACAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCACTCCAATCACAGGCAACAA 740
Query 351 CTCTGACAAATC-------------------------------------------------------------- 362
||||||||||||
Sbjct 741 CTCTGACAAATCAGAGAGCACTGCCTTGAATTGGACATTCCTTATTTCAGCAAACGTATTGCTCACCTATGGCT 814
Query 363 -------------------AGAAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAA 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTCTGTACATTGGGCATAAAGAAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAA 888
Query 418 AGTGGCTCATTTATCCTCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCAC 491
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGTGGCTCATTTCTCCTCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCAC 962
Query 492 AAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCCAAAAAATTACTTTATTGTTCACTATGCA 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCCAAAAAATTACTTTATTGTTCACTATGCA 1036
Query 566 AAGTGGCTGTGAACTCCCTGTCACAGCTAGAGGCACACAACACAGGATCTAAACACAAGACCATGGTTGAAGCT 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AAGTGGCTGTGAACTCCCTGTCACAGCTAGAGGCACACAACACAGGATCTAAACACAAGACCATGGTTGAAGCT 1110
Query 640 CGTAATGGGGCTGGTCCAATTAAATCCTATCCTAGACCTGGATCAAGATTAAAGATGCAGAATGGCAGTAAGGG 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CGTAATGGGGCTGGTCCAATTAAATCCTATCCTAGACCTGGATCAAGATTAAAGATGCAGAATGGCAGTAAGGG 1184
Query 714 GTCAGGACTACAGAACAAGACATTTCATTGTGAAATCTGTGATGTTCATGTTAATTCAGAAATTCAACTCAAAC 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GTCAGGACTACAGAACAAGACATTTCATTGTGAAATCTGTGATGTTCATGTTAATTCAGAAATTCAACTCAAAC 1258
Query 788 AGCACATTTCTAGCCGAAGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAGCCAAAATACAGCCCTTACAAC 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGCACATTTCTAGCCGAAGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAGCCAAAATACAGCCCTTACAAC 1332
Query 862 AAACTCCAGCGGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTCCAGAAAGATATGATGAAGCCTTTGGCCCC 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AAACTCCAGCGGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTCCAGAAAGATATGATGAAGCCTTTGGCCCC 1406
Query 936 AGCCTTCCTGTCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCTCAGCGCTGTCACTCCCACCCCGGCCCTCTG 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AGCCTTCCTGTCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCTCAGCGCTGTCACTCCCACCCCGGCCCTCTG 1480
Query 1010 CCTCGCTCTTCCAGGCTCCAGCCATTCCTCCAGCTCTTCTGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCT 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCTCGCTCTTCCAGGCTCCAGCCATTCCTCCAGCTCTTCTGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCT 1554
Query 1084 GCCTCCATCCTCTTTGCTCCGTAC 1107
||||||||||||||||||||||||
Sbjct 1555 GCCTCCATCCTCTTTGCTCCGTAC 1578