Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09811
- Subject:
- NM_001135036.1
- Aligned Length:
- 860
- Identities:
- 552
- Gaps:
- 283
Alignment
Query 1 ATGTTGCAGCAGGATAGTAATGATGACACTGAAGATGTTTCACTGTTTGATGCGGAAGAGGAGACGACTAATAG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTGCAGCAGGATAGTAATGATGACACTGAAGATGTTTCACTGTTTGATGCGGAAGAGGAGACGACTAATAG 74
Query 75 ACCAAGAAAAGCCAAAATCAGACATCCAGTAGCATCGTTTTTCCACTTATTCTTTCGAGTCAGTGCAATCATCG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ACCAAGAAAAGCCAAAATCAGACATCCAGTAGCATCGTTTTTCCACTTATTCTTTCGAGTCAGTGCAATCATCG 148
Query 149 TCTGTCTTCTCTGTGAGTTGCTCAGCAGCAGCTTTATTACCTGTATGGTTACAATTATCTTGTTGTTGTCGTGT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCTGTCTTCTCTGTGAGTTGCTCAGCAGCAGCTTTATTACCTGTATGGTTACAATTATCTTGTTGTTGTCGTGT 222
Query 223 GACTTTTGGGCAGTGAAGAATGTCACAGGTAGACTAATGGTTGGCCTACGTTGGTGGAATCACATTGATGAAGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GACTTTTGGGCAGTGAAGAATGTCACAGGTAGACTAATGGTTGGCCTACGTTGGTGGAATCACATTGATGAAGA 296
Query 297 TGGAAAGAGCCATTGGGTGTTTGAATCTAGAAAGGAGTCCTCTCAAGAGAATAAAACTGTGTCAGAGGCTGAAT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGGAAAGAGCCATTGGGTGTTTGAATCTAGAAAGGAGTCCTCTCAAGAGAATAAAACTGTGTCAGAGGCTGAAT 370
Query 371 CAAGAATCTTTTGGTTGGGACTTATTGCCTGTTCAGTACTGTGGGTGATATTTGCCTTTAGTGCACTCTTCTCC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAAGAATCTTTTGGTTGGGACTTATTGCCTGTTCAGTACTGTGGGTGATATTTGCCTTTAGTGCACTCTTCTCC 444
Query 445 TTCACAGTAAAGTGGCTGAGACGGT--CTCGCCACATTGCCCAGACTGGTCTGAAAGTCTTGGGCT-CAAGAGA 515
||||||||||||||||| |.|||| .| ||| .||| ||.|.|.||| ||||
Sbjct 445 TTCACAGTAAAGTGGCT--GGCGGTGGTT------ATT-------ATGG-------GTGTGGTGCTACAAG--- 493
Query 516 TCCTCCCGCTTCCGCCTTCCAAAGCGCTG---GG--ATAACAGGCGTGAG--CCGCTGCCCGGGCCATCCCTCG 582
.|.|||| .||| || |.|.||||.||.|| .|||.||
Sbjct 494 ---------------GTGCCAA---CCTGTATGGTTACATCAGGTGTAAGGTGCGCAGC--------------- 534
Query 583 AGTAAG--TTTCATCAGGTAGACAT---TAATTC-----------------TTTCACGAGGATCACGGATCGAG 634
||.||| |||.|.||| ||| ||.||| |||.|.|| ||.|.| ||
Sbjct 535 AGAAAGCATTTAACCAG-----CATGGCTACTTCATATTTTGGAAAGCAGTTTTTAAGA----CAAGTA---AG 596
Query 635 CTCTTTACTGGAAACCTGCGCCCCGCCTTAGTTCTCCACCTCTTCGTGCGGCTCCAGGCAACTGCCAACAGATG 708
|.|||.||||| ||
Sbjct 597 -TGTTTTCTGGA----TG-------------------------------------------------------- 609
Query 709 GCGCCCGCCCGCCTATTTCTCTCCTTGCGGCTTTGGGCCTGGAGGGGAGGTGGGGAGAGTCCCAATAGCAGAGG 782
Sbjct 610 -------------------------------------------------------------------------- 609
Query 783 AACTGGTGAGCCCGGGCCAAAATTTCATCTGGCATCCGGAATGCAT 828
Sbjct 610 ---------------------------------------------- 609