Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09811
- Subject:
- NM_001316919.1
- Aligned Length:
- 847
- Identities:
- 370
- Gaps:
- 443
Alignment
Query 1 ATGTTGCAGCAGGATAGTAATGATGACACTGAAGATGTTTCACTGTTTGATGCGGAAGAGGAGACGACTAATAG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 ACCAAGAAAAGCCAAAATCAGACATCCAGTAGCATCGTTTTTCCACTTATTCTTTCGAGTCAGTGCAATCATCG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCTGTCTTCTCTGTGAGTTGCTCAGCAGCAGCTTTATTACCTGTATGGTTACAATTATCTTGTTGTTGTCGTGT 222
|||||.||||||||||||||||||||||||
Sbjct 1 --------------------------------------------ATGGTGACAATTATCTTGTTGTTGTCGTGT 30
Query 223 GACTTTTGGGCAGTGAAGAATGTCACAGGTAGACTAATGGTTGGCCTACGTTGGTGGAATCACATTGATGAAGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 31 GACTTTTGGGCAGTGAAGAATGTCACAGGTAGACTAATGGTTGGCCTACGTTGGTGGAATCACATTGATGAAGA 104
Query 297 TGGAAAGAGCCATTGGGTGTTTGAATCTAGAAAGGAGTCCTCTCAAGAGAATAAAACTGTGTCAGAGGCTGAAT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 105 TGGAAAGAGCCATTGGGTGTTTGAATCTAGAAAGGAGTCCTCTCAAGAGAATAAAACTGTGTCAGAGGCTGAAT 178
Query 371 CAAGAATCTTTTGGTTGGGACTTATTGCCTGTTCAGTACTGTGGGTGATATTTGCCTTTAGTGCACTCTTCTCC 444
||||||||||||||||||||||||||||||||.||||||||||||||||||||||.||||||||||||||||||
Sbjct 179 CAAGAATCTTTTGGTTGGGACTTATTGCCTGTCCAGTACTGTGGGTGATATTTGCTTTTAGTGCACTCTTCTCC 252
Query 445 TTCACAGTAAAGTGGCTGAGACGGTCTCGCCACATTGCCCAGACTGGTCTGAAAGTCTTGGGCTCAAGAGATCC 518
||||.||||||||||.| |.||||
Sbjct 253 TTCAGAGTAAAGTGGTT--GGCGGT------------------------------------------------- 275
Query 519 TCCCGCTTCCGCCTTCCAAAGCGCTGGGATAACAGGCGTGAGCCGCTGCCCGG-GCCATCCCTCGAGTA-AGTT 590
||.||.||.|.|||.|..|||.|..|| ||||.|| .||| .|||
Sbjct 276 --------------------------GGTTATCATGGGTGTGGTGCTACAAGGTGCCAACC----TGTATGGTT 319
Query 591 TCATCAGGTAGACATTAATTCTTTCACGAGGATCACGGATCGAGCTCTTTACTGGAAACCTGCGCCCCGCCTTA 664
.|||||||| |.||..||||| |
Sbjct 320 ACATCAGGT---------------------------------------------GTAAGGTGCGC--------A 340
Query 665 GTTCTCCACCTCTTCGTGCGGCTCCAG---GCAACTGCCAA-CAG-ATGGCGCCCGCCCGCCTATTTC-TCTCC 732
| ||| |||..| || ||| |||| |||.||| |.|
Sbjct 341 G-----------------------CAGAAAGCATTT---AACCAGCATGG-----------CTACTTCATAT-- 375
Query 733 TTGCGGCTTTGGGCCTGGAGGGGAGGTGGGGAGAGTCCCAATAGCAG-----AGGA------ACTGGTGAGCCC 795
||||| |.||||| |.|| |||||.||
Sbjct 376 -------TTTGG----------------------------AAAGCAGTTTTTAAGACAAAACACTGGAGA---- 410
Query 796 GGGCCAAAATTTCATCTGGCATCCGGAATGCAT 828
|.|||.|.|.|||
Sbjct 411 -----------TGATCAGACTTCC--------- 423