Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_09814
• Subject: XM_011524495.3
• Aligned Length: 1060
• Identities: 762
• Gaps: 272

Alignment

Query    1  ATGCTCCAAGGCCACAGCTCTGTGTTCCAGGCCTTGCTGGGGACCTTCTTCACCTGGGGGATGACAGCAGCTGG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTCCAAGGCCACAGCTCTGTGTTCCAGGCCTTGCTGGGGACCTTCTTCACCTGGGGGATGACAGCAGCTGG  74

Query   75  GGCAGCTCTCGTGTTCGTATTCTCTAGTGGACAGAGGCGGATCTTAGATGGAAGTCTTGGCTTTGCTGCAGGGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGCAGCTCTCGTGTTCGTATTCTCTAGTGGACAGAGGCGGATCTTAGATGGAAGTCTTGGCTTTGCTGCAGGGG  148

Query  149  TCATGTTGGCAGCTTCCTATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCTTCGGT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCATGTTGGCAGCTTCCTATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCTTCGGT  222

Query  223  GCCTTTGCCTTCTTCCCTGTGGCTGTTGGCTTCACCCTTGGAGCGGCTTTTGTCTACTTGGCTGACCTCCTGAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCCTTTGCCTTCTTCCCTGTGGCTGTTGGCTTCACCCTTGGAGCGGCTTTTGTCTACTTGGCTGACCTCCTGAT  296

Query  297  GCCTCACTTGGGTGCAGCAGAAGACCCCCAGACGGCCCTGGCACTGAACTTCGGCTCTACGTTGATGAAGAAGA  370
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCTCACTTGGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGCTCTACGTTGATGAAGAAGA  370

Query  371  AGTCTGATCCTGAGGGTCCCGCGCTGCTCTTCCCTGAGAGTGAACTTTCCATCCGGAT----------------  428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
Sbjct  371  AGTCTGATCCTGAGGGTCCCGCGCTGCTCTTCCCTGAGAGTGAACTTTCCATCCGGATAGGTAGAGCTGGGCTT  444

Query  429  -----AGACAAGAGTGAGAATGGTGAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCC  497
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTTTCAGACAAGAGTGAGAATGGTGAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCC  518

Query  498  TGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCGCACTGCTCA  571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCGCACTGCTCA  592

Query  572  TCTTGGCCATCACTATACACAACGTTCCAGAGGGTCTCGCTGTTGGAGTTGGATTTGGGGCTATAGAAAAGACG  645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCTTGGCCATCACTATACACAACGTTCCAGAGGGTCTCGCTGTTGGAGTTGGATTTGGGGCTATAGAAAAGACG  666

Query  646  GCATCTGCTACCTTTGAGAGTGCCAGGAATTTGGCCATTGGAATCGGGATCCAGAATTTCCCCGAGGGCCTGGC  719
            ||||||||||||||||||||||||||                          ||||     ||.|||..|||..
Sbjct  667  GCATCTGCTACCTTTGAGAGTGCCAG--------------------------AGAA-----CCAAGGAACTGCA  709

Query  720  TGTCAGCCTTCCCTTGCG------AGGGGCAG--GCTTCTCCACCTGGAGAGCTTTCTGGTATGGGCAGCTGAG  785
            |..||||         .|      ||||||||  ||||||                    ||..||.||..||.
Sbjct  710  TACCAGC---------AGAAAGAAAGGGGCAGCTGCTTCT--------------------TAAAGGGAGGAGAT  754

Query  786  C-----GGCATGGTGGAGCCCCTGGCCGG--GGTCTTTGGT------------GCCTTTGCCGTGGTGCTGGCT  840
            |     .|.|.|||..||         ||  |||||.||.|            |||.|                
Sbjct  755  CACAAAAGAAGGGTCAAG---------GGAAGGTCTATGCTCAACTAAGGGCAGCCAT----------------  803

Query  841  GAGCCCA----TCCTGCCCTACGCTCTGGCCTTTGCTGCCGGTGCC---ATGGTCTACGTGGTCATGGACGACA  907
              |||||    .|||||        |||||||       |||| ||   |.|            |||||.    
Sbjct  804  --GCCCACAGCACCTGC--------CTGGCCT-------CGGT-CCAGAAAG------------ATGGAG----  843

Query  908  TCATCCCCGAAGCCCAGATCAGTGGTAATGGGAAACTGGCATCCTGGGCCTCCATCCTGGGATTTGTAGTGATG  981
                                                                                      
Sbjct  844  --------------------------------------------------------------------------  843

Query  982  ATGTCACTGGACGTTGGCCTGGGC  1005
                                    
Sbjct  844  ------------------------  843