Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_09814
• Subject: XM_011524496.2
• Aligned Length: 1060
• Identities: 740
• Gaps: 287

Alignment

Query    1  ATGCTCCAAGGCCACAGCTCTGTGTTCCAGGCCTTGCTGGGGACCTTCTTCACCTGGGGGATGACAGCAGCTGG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTCCAAGGCCACAGCTCTGTGTTCCAGGCCTTGCTGGGGACCTTCTTCACCTGGGGGATGACAGCAGCTGG  74

Query   75  GGCAGCTCTCGTGTTCGTATTCTCTAGTGGACAGAGGCGGATCTTAGATGGAAGTCTTGGCTTTGCTGCAGGGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGCAGCTCTCGTGTTCGTATTCTCTAGTGGACAGAGGCGGATCTTAGATGGAAGTCTTGGCTTTGCTGCAGGGG  148

Query  149  TCATGTTGGCAGCTTCCTATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCTTCGGT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCATGTTGGCAGCTTCCTATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCTTCGGT  222

Query  223  GCCTTTGCCTTCTTCCCTGTGGCTGTTGGCTTCACCCTTGGAGCGGCTTTTGTCTACTTGGCTGACCTCCTGAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCCTTTGCCTTCTTCCCTGTGGCTGTTGGCTTCACCCTTGGAGCGGCTTTTGTCTACTTGGCTGACCTCCTGAT  296

Query  297  GCCTCACTTGGGTGCAGCAGAAGACCCCCAGACGGCCCTGGCACTGAACTTCGGCTCTACGTTGATGAAGAAGA  370
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCTCACTTGGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGCTCTACGTTGATGAAGAAGA  370

Query  371  AGTCTGATCCTGAGGGTCCCGCGCTGCTCTTCCCTGAGAGTGAACTTTCCATCCGGAT----------------  428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
Sbjct  371  AGTCTGATCCTGAGGGTCCCGCGCTGCTCTTCCCTGAGAGTGAACTTTCCATCCGGATAGGTAGAGCTGGGCTT  444

Query  429  -----AGACAAGAGTGAGAATGGTGAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCC  497
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTTTCAGACAAGAGTGAGAATGGTGAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCC  518

Query  498  TGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCGCACTGCTCA  571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCGCACTGCTCA  592

Query  572  TCTTGGCCATCACTATACACAACGTTCCAGAGGGTCTCGC-TGT-------TGGAGTTGGATTTGGGGCTATAG  637
            |||||||||||||||||||||||||||||   |||   || |||       |||||                  
Sbjct  593  TCTTGGCCATCACTATACACAACGTTCCA---GGT---GCTTGTCCACACCTGGAG------------------  642

Query  638  AAAAGACGGCA----TCTGCTACCTTTGAGAGTGCCAGGAATTTGGCCATTGGA---ATCGGGATCCAGAATTT  704
                ||..|||    .|.|.|||||.|       |||||    ||.||| .|||   | |..|||  ||||   
Sbjct  643  ----GAATGCACCCTCCAGATACCTCT-------CCAGG----TGTCCA-AGGAGCTA-CAAGAT--AGAA---  694

Query  705  CCCCGAG--------GGCCT--GGCTGTCAG-------CCTTCCCTTGCGAGGGGCAGGCTTCTCCACCTGGAG  761
                |||        .||||  ||||.||||       |||           ..|||||         ||||| 
Sbjct  695  ----GAGACTGCCACAGCCTGGGGCTTTCAGACAAGAACCT-----------CAGCAGG---------CTGGA-  743

Query  762  AGCTTTCTGGTATGGGCAGCTGAGCGGCATGGTGGAGCCCCTGGCCGGGGTCTTTGGTGCCTTTGCCGTGGTGC  835
              ||          ||.|.||.|||  ||.|  |||| |..||||        |||  .|||||  || ||| |
Sbjct  744  --CT----------GGAAACTAAGC--CACG--GGAG-CAGTGGC--------TTG--ACCTTT--CG-GGT-C  786

Query  836  TGGCTGAGCCCATCCTGCCCTACGCTCTGG-CCTTTGCTGCCGGTGCCATGGTCTACGTGGTCATGGACGACAT  908
            ..|.|||                   .||| |||||...||                       |||||.|.| 
Sbjct  787  AAGATGA-------------------TTGGACCTTTCAGGC-----------------------TGGACAAAA-  817

Query  909  CATCCCCGAAG-CCCAGATCAGTGGTAATGGGAAACTGGCATCCTGGGCCTCCATCCTGGGATTTGTAGTGATG  981
                   |||| |.|||.                                                        
Sbjct  818  -------GAAGACACAGG--------------------------------------------------------  828

Query  982  ATGTCACTGGACGTTGGCCTGGGC  1005
                                    
Sbjct  829  ------------------------  828