Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09905
- Subject:
- XM_017026557.1
- Aligned Length:
- 2301
- Identities:
- 823
- Gaps:
- 1476
Alignment
Query 1 ATGGCCACAGCCGCCACCACCACCACCACCACCACTGCCACAGTAGCCCTGACGACGTCGTGGGACAATGCCAC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGGACGCCCCACGGCAGAGCCAGACCCCATCCTGGACAACTACGTGCTGCTGGTGGTGGTGATGTCGCTGTTCG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGGGGGGCACGCTGGTGGTGTTGTCTGGCGTCCTGCTCCTCTGCAAGCGCTGCTGGGACGTCCACCAGCGCCTC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AACAGGGCCATGGAGGAAGCGGAGAAGACCACCACCACCTACCTGGACAACGGCACCCACCCAGCCCAAGACCC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CGACTTCCGGGGAGAGGACCCCGAGTGCCAGGATGCGGAGACCGAACGCTTCCTGTCCACCAGCTCCACGGGCC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GCCGGGTCTCCTTCAATGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGGGTCGCCGGTACACA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CTGACGGAGGGGGACTTCCACCACCTGAAGAATGCCCGGCTCACGCACCTGCACCTGCCGCCCCTCAAGATTGT 518
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 -------------------------------ATGCCCGGCTCACGCACCTGCACCTGCCGCCCCTCAAGATTGT 43
Query 519 CACCATCCACGAGTGTGACTCAGGCGAGGCCAGCTCAGCCACCACGCCCCACCCGGCCACCTCTCCCAAGGCCA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 44 CACCATCCACGAGTGTGACTCAGGCGAGGCCAGCTCAGCCACCACGCCCCACCCGGCCACCTCTCCCAAGGCCA 117
Query 593 CTCTGGCCATCTTCCAGCCCCCGGGGAAGGCCCTCACCGGCCGCTCTGTGGGCCCCAGCTCCGCCCTGCCAGGT 666
||||||||||||| ||||||||||||||||||||
Sbjct 118 CTCTGGCCATCTT-----------------------------------------CCAGCTCCGCCCTGCCAGGT 150
Query 667 GACCCCTACAACTCAGCCGCGGGCGCCACTGACTTCGCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGGGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 151 GACCCCTACAACTCAGCCGCGGGCGCCACTGACTTCGCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGGGA 224
Query 741 AGGCACCTTGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGGGGCTGCAGCAGGGCCTGGGGAGG 814
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 225 AGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGGGGCTGCAGCAGGGCCTGGGGAGG 298
Query 815 CGGGCCCGGGATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCCATGCCAGCCTGGATGGG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 299 CGGGCCCGGGATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCCATGCCAGCCTGGATGGG 372
Query 889 GCCAGCCCCTATTTCAAGGTCAAGAAGTGGAAGCTGGAGCCCAGCCAGCGGGCAGCCAGTCTGGACACGAGAGG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 373 GCCAGCCCCTATTTCAAGGTCAAGAAGTGGAAGCTGGAGCCCAGCCAGCGGGCAGCCAGTCTGGACACGAGAGG 446
Query 963 TTCCCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCACGGAGCAGGAGGAGGGGGATGCCC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 447 TTCCCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCACGGAGCAGGAGGAGGGGGATGCCC 520
Query 1037 CCCAGGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGCCTTCCCGCGCCCCCGCCCCTTTCTG 1110
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 521 CCCAGGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGCCTTCCCGCACCCCCGCCCCTTTCTG 594
Query 1111 GCCAGCCCGCCCCCTGCTCTCGGCAGGTATTTTTCAGTAGATGGAGGTGCTAGGGGTGGACCTGTGGGCCCTTG 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595 GCCAGCCCGCCCCCTGCTCTCGGCAGGTATTTTTCAGTAGATGGAGGTGCTAGGGGTGGACCTGTGGGCCCTTG 668
Query 1185 CCCCCCTTCGCCCCCCCCTAGGCGGCCCAGGGAGCGCTCTCCAGGCCCCGTGGACACGCGCTCGCCTGCCTCCA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 CCCCCCTTCGCCCCCCCCTAGGCGGCCCAGGGAGCGCTCTCCAGGCCCCGTGGACACGCGCTCGCCTGCCTCCA 742
Query 1259 GCGGCAAGGCCCCTCCCAGAGGCGGACTCACTGGGGCCACCTCTCCAGCATGGACCAGAGGAGGGAAGCAGGGA 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 743 GCGGCAAGGCCCCTCCCAGAGGCGGACTCACTGGGGCCACCTCTCCAGCATGGACCAGAGGAGGGAAGCAGGGA 816
Query 1333 GAGACTGGG----------------------------------------------------------------- 1341
|||||||||
Sbjct 817 GAGACTGGGCTAGAGGCGGCCGAGGCAGCGGGAGGAGCGAGCCCCGATTCCCCCCCGGAGCGCGGCGCGGGCAG 890
Query 1342 -------------------------------------------------------------------------- 1341
Sbjct 891 CGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGAGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGA 964
Query 1342 -------------------------------------------------------------------------- 1341
Sbjct 965 CCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGCTGCATGCGGCCGCCTCGGACCACAGCAGCAGC 1038
Query 1342 -------------------------------------------------------------------------- 1341
Sbjct 1039 GGCAACGACCGCGACTCGGTGCGCAGCGGCGACAGCTCGGGCTCAGGCTCCGGGGGCGCGGCGCCCGCCTTCCC 1112
Query 1342 -------------------------------------------------------------------------- 1341
Sbjct 1113 GCCGCCCTCCCCGCCCGCGCCGCGGCCCAAGGACGGCGAGGCGCGCCGGCTGCTGCAGATGGACAGTGGCTACG 1186
Query 1342 -------------------------------------------------------------------------- 1341
Sbjct 1187 CCAGCATCGAGGGCCGCGGCGCAGGCGACGACACCGAGCCACCTGCCGCGCCCGCCCGGCCCCGCAGCCCGCGC 1260
Query 1342 -------------------------------------------------------------------------- 1341
Sbjct 1261 GCCTGGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGCTGTTCCACGAGTTCCTGCG 1334
Query 1342 -------------------------------------------------------------------------- 1341
Sbjct 1335 CCACGACCCGCACTTCGACGACACGCCGGCTGCCGCGCGACACCGCGCCCGCGCGCACCCGCACGCCCGCAAAC 1408
Query 1342 -------------------------------------------------------------------------- 1341
Sbjct 1409 AGTGGCAGCGTGGCCGGCAGCACAGCGACCCCGGCGCCCGCGCGGCCCCGGCCCTGGCCGGAACCCCGGCACCG 1482
Query 1342 -------------------------------------------------------------------------- 1341
Sbjct 1483 CCTGCCGGCGCGGCCCGACCCGCGCGTGCGCCCTTGCGGCGCGGCGACAGCGTGGACGGCCCGCCCGACGGTCG 1556
Query 1342 -------------------------------------------------------------------------- 1341
Sbjct 1557 CACCCTGGGCGGCGCCGGCGACGACCCCGCCATCCCCGTCATCGAGGAGGAGCCGGGCGGCGGGGGGTGCCCCG 1630
Query 1342 -------------------------------------------------------------------------- 1341
Sbjct 1631 GCTCGGGCCTGTGCGTCCTACCATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTT 1704
Query 1342 -------------------------------------------------------------------------- 1341
Sbjct 1705 CCGCCGCGCCTCGCCGAGCCCGTCGTGGCGACTCCCGCGTTGGTCGCCGCCGCCCCCACGTCCCCCGACCACAG 1778
Query 1342 ------- 1341
Sbjct 1779 CCCGGCC 1785
