Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09905
- Subject:
- XR_001753654.1
- Aligned Length:
- 1735
- Identities:
- 1089
- Gaps:
- 644
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTGGGCCCCGATGGGCTCTGCTCAGCTTTGTGCCGGGGTCTGTGATCGCTGTCACACAGGGGAGGGGGCAGGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGCATGGCGAGTCCTCCACAGTGCCAGAGGGGACCTGCGTGGGGAAGCAGGCGGGGCGCCTGTGTCCAGAGAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTGGGCTGTGCAGCTTAAAGGGGAATTGTGGCCGAGGGGCCCTGGCTGTGCCGCCCCAGAACCCCCACGGACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGCAACGTGAGAGGGGAGTCCGTGCCCCCCCGGACCCCACCCCCTCCTGCGCACGCGGCGCACCTCGGGCTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAGTCGTGAATTCCAGGACACCCCCAGCTGCGTCCCTGGGACCTCAGGACCGGGCGAGGGCCCTCCTCCCCAG 370
Query 1 ------------------------ATGGCCACAGCCGCCACCACCACCACCACCACCACTGCCACAGTAGCCCT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTCAGAATGCAGCCCACAGCCACCATGGCCACAGCCGCCACCACCACCACCACCACCACTGCCACAGTAGCCCT 444
Query 51 GACGACGTCGTGGGACAATGCCACTGGACGCCCCACGGCAGAGCCAGACCCCATCCTGGACAACTACGTGCTGC 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GACGACGTCGTGGGACAATGCCACTGGACGCCCCACGGCAGAGCCAGACCCCATCCTGGACAACTACGTGCTGC 518
Query 125 TGGTGGTGGTGATGTCGCTGTTCGTGGGGGGCACGCTGGTGGTGTTGTCTGGCGTCCTGCTCCTCTGCAAGCGC 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGGTGGTGGTGATGTCGCTGTTCGTGGGGGGCACGCTGGTGGTGTTGTCTGGCGTCCTGCTCCTCTGCAAGCGC 592
Query 199 TGCTGGGACGTCCACCAGCGCCTCAACAGGGCCATGGAGGAAGCGGAGAAGACCACCACCACCTACCTGGACAA 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGCTGGGACGTCCACCAGCGCCTCAACAGGGCCATGGAGGAAGCGGAGAAGACCACCACCACCTACCTGGACAA 666
Query 273 CGGCACCCACCCAGCCCAAGACCCCGACTTCCGGGGAGAGGACCCCGAGTGCCAGGATGCGGAGACCGAACGCT 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CGGCACCCACCCAGCCCAAGACCCCGACTTCCGGGGAGAGGACCCCGAGTGCCAGGATGCGGAGACCGAACGCT 740
Query 347 TCCTGTCCACCAGCTCCACGGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCCTGTCCACCAGCTCCACGGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACG 814
Query 421 CAGGACAAGGGTCGCCGGTACACACTGACGGAGGGGGACTTCCACCACCTGAAGAATGCCCGGCTCACGCACCT 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAGGACAAGGGTCGCCGGTACACACTGACGGAGGGGGACTTCCACCACCTGAAGAATGCCCGGCTCACGCACCT 888
Query 495 GCACCTGCCGCCCCTCAAGATTGTCACCATCCACGAGTGTGACTCAGGCGAGGCCAGCTCAGCCACCACGCCCC 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCACCTGCCGCCCCTCAAGATTGTCACCATCCACGAGTGTGACTCAGGCGAGGCCAGCTCAGCCACCACGCCCC 962
Query 569 ACCCGGCCACCTCTCCCAAGGCCACTCTGGCCATCTTCCAGCCCCCGGGGAAGGCCCTCACCGGCCGCTCTGTG 642
|||||||||||||||||||||||||||||||||||||
Sbjct 963 ACCCGGCCACCTCTCCCAAGGCCACTCTGGCCATCTT------------------------------------- 999
Query 643 GGCCCCAGCTCCGCCCTGCCAGGTGACCCCTACAACTCAGCCGCGGGCGCCACTGACTTCGCAGAGATCAGCCC 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1000 ----CCAGCTCCGCCCTGCCAGGTGACCCCTACAACTCAGCCGCGGGCGCCACTGACTTCGCAGAGATCAGCCC 1069
Query 717 CTCGGCATCTAGCGACTCTGGGGAAGGCACCTTGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCG 790
||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 1070 CTCGGCATCTAGCGACTCTGGGGAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCG 1143
Query 791 GGGCTGCAGCAGGGCCTGGGGAGGCGGGCCCGGGATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCTG 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1144 GGGCTGCAGCAGGGCCTGGGGAGGCGGGCCCGGGATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCTG 1217
Query 865 CGCCGCCATGCCAGCCTGGATGGGGCCAGCCCCTATTTCAAGGTCAAGAAGTGGAAGCTGGAGCCCAGCCAGCG 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1218 CGCCGCCATGCCAGCCTGGATGGGGCCAGCCCCTATTTCAAGGTCAAGAAGTGGAAGCTGGAGCCCAGCCAGCG 1291
Query 939 GGCAGCCAGTCTGGACACGAGAGGTTCCCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCA 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1292 GGCAGCCAGTCTGGACACGAGAGGTTCCCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCA 1365
Query 1013 CGGAGCAGGAGGAGGGGGATGCCCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGCC 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1366 CGGAGCAGGAGGAGGGGGATGCCCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGCC 1439
Query 1087 TTCCCGCGCCCCCGCCCCTTTCTGGCCAGCCCGCCCCCTGCTCTCGGCAGGTATTTTTCAGTAGATGGAGGTGC 1160
|||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1440 TTCCCGCACCCCCGCCCCTTTCTGGCCAGCCCGCCCCCTGCTCTCG---------------------------- 1485
Query 1161 TAGGGGTGGACCTGTGGGCCCTTGCCCCCCTTCGCCCCCCCCTAGGCGGCCCAGGGAGCGCTCTCCAGGCCCCG 1234
Sbjct 1486 -------------------------------------------------------------------------- 1485
Query 1235 TGGACACGCGCTCGCCTGCCTCCAGCGGCAAGGCCCCTCCCAGAGGCGGACTCACTGGGGCCACCTCTCCAGCA 1308
Sbjct 1486 -------------------------------------------------------------------------- 1485
Query 1309 TGGACCAGAGGAGGGAAGCAGGGAGAGACTGGG 1341
Sbjct 1486 --------------------------------- 1485
