Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09983
Subject:
NM_001323307.2
Aligned Length:
1638
Identities:
399
Gaps:
1203

Alignment

Query    1  ATGGCTGTCAGCCACCTGCCAACCATGGTCCAGGAATCGGTGACCTTCAAGGATGTGGCTATACTGTTCACCCA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCTGTCAGCCACCTGCCAACCATGGTCCAGGAATCGGTGACCTTCAAGGATGTGGCTATACTGTTCACCCA  74

Query   75  GGAAGAGTGGGGGCAGCTGAGCCCCGCCCAGAGGGCCCTGTACAGGGACGTGATGCTGGAGAACTACAGCAACC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGAAGAGTGGGGGCAGCTGAGCCCCGCCCAGAGGGCCCTGTACAGGGACGTGATGCTGGAGAACTACAGCAACC  148

Query  149  TGGTCTCACTGGGACTCTTAGGACCCAAACCAGATACGTTTTCCCAGCTAGAAAAAAGGGAAGTGTGGATGCCA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGGTCTCACTGGGACTCTTAGGACCCAAACCAGATACGTTTTCCCAGCTAGAAAAAAGGGAAGTGTGGATGCCA  222

Query  223  GAGGACACCCCTGGAGGCTTCTGTCTTGACTGGA---TGACTATGCCTGCCAGTAAGAAATCTACTGT---CAA  290
            ||||||||||||||||||||||||||||| ||||   |.|||                      ||||   |||
Sbjct  223  GAGGACACCCCTGGAGGCTTCTGTCTTGA-TGGAGTCTCACT----------------------CTGTTACCAA  273

Query  291  GGCAGAGATTCCTGAAGAAGAATTGGATCAATGG-ACAATAAAGGAAAGATTCAGTAGCAGTAGTCACTGGAAG  363
            |          |||.||      ||   ||.||| |||||...||                  .||||||.|| 
Sbjct  274  G----------CTGGAG------TG---CAGTGGTACAATCTCGG------------------CTCACTGCAA-  309

Query  364  TGTGCT-AGCCTGCTGGAGTGGCAATGTGGAG--------GCCAGGAGATCAGTTTGCAGCGAG----TGGTAC  424
               ||| .|||| |..|||| .|||    |.|        |||      |||||.|.|  ||||    |||.||
Sbjct  310  ---GCTCCGCCT-CCCGAGT-TCAA----GCGATTCTCCTGCC------TCAGTCTCC--CGAGTAGCTGGGAC  366

Query  425  T-CACTCACC--CCAACAC-CCCATCACAGGA------ATGTGAT-------GAATCCGGG-AGCACTATG---  477
            | ||..|.||  |||.||| |||      |||      .||||.|       ||..|.||| ..|||.|||   
Sbjct  367  TACAGGCGCCTGCCACCACGCCC------GGATAATTTTTGTGTTTTTAGTAGAGACAGGGTTTCACCATGTTG  434

Query  478  ---AG------CTC-ATCTCTTCAC--AGTG------------------CTCAAAGT-CAGGGATTTCAACCTA  520
               ||      ||| |||||||.||  .|||                  |.|||||| |.||||||.||..|. 
Sbjct  435  GCCAGGGTGGTCTCGATCTCTTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCG-  507

Query  521  GCAAAAATGCCTTTGAGTGTAGTGAGTGTGGAAAAGTCTTCTCTAAGAGTTCAACTCTTAATAAACATCAGAAA  594
                                                                                      
Sbjct  508  --------------------------------------------------------------------------  507

Query  595  ATTCATAATGAAAAAAATGCAAATCAGAAAATTCATATTAAGGAGAAAAGATATGAATGTAGAGAATGTGGGAA  668
                                                                                      
Sbjct  508  --------------------------------------------------------------------------  507

Query  669  AGCCTTTCACCAGAGTACGCACCTTATCCATCACCAAAGAATTCACACTGGCGAGAAACCCTATGAATGTAAGG  742
                                                                                      
Sbjct  508  --------------------------------------------------------------------------  507

Query  743  AATGTGGCAAGGCCTTCTCAGTGAGCTCCTCACTTACGTACCATCAGAAAATTCATACTGGAGAGAAGCCTTTT  816
                                                                                      
Sbjct  508  --------------------------------------------------------------------------  507

Query  817  GAATGCAACTTATGTGGAAAAGCTTTTATCCGAAATATACACCTTGCCCATCATCATAGAATACATACTGGAGA  890
                                                                                      
Sbjct  508  --------------------------------------------------------------------------  507

Query  891  GAAACCTTTTAAATGTAACATTTGTGAAAAAGCCTTTGTGTGCAGGGCACACCTTACCAAACACCAGAATATCC  964
                                                                                      
Sbjct  508  --------------------------------------------------------------------------  507

Query  965  ACAGTGGAGAGAAACCCTATAAATGCAATGAATGTGGAAAAGCCTTTAATCAGAGTACAAGTTTCCTTCAGCAT  1038
                                                                                      
Sbjct  508  --------------------------------------------------------------------------  507

Query 1039  CAGAGAATTCACACTGGAGAGAAACCCTTTGAATGTAATGAATGTGGGAAGGCCTTCAGGGTGAACTCTTCCCT  1112
                                                                                      
Sbjct  508  --------------------------------------------------------------------------  507

Query 1113  TACTGAACATCAGAGAATTCATACTGGAGAGAAACCTTATAAATGTAATGAATGTGGGAAAGCTTTCAGGGATA  1186
                                                                                      
Sbjct  508  --------------------------------------------------------------------------  507

Query 1187  ATTCATCCTTTGCACGACATCGGAAAATTCACACTGGAGAGAAACCTTACAGATGTGGCTTGTGTGAGAAAGCC  1260
                                                                                      
Sbjct  508  --------------------------------------------------------------------------  507

Query 1261  TTTCGGGACCAATCAGCACTAGCCCAACATCAGAGAATTCATACTGGGGAAAAACCTTATACATGTAACATATG  1334
                                                                                      
Sbjct  508  --------------------------------------------------------------------------  507

Query 1335  TGAAAAAGCCTTCAGTGACCATTCAGCCCTTACCCAACATAAGAGAATTCATACTAGGGAAAAACCTTACAAAT  1408
                                                                                      
Sbjct  508  --------------------------------------------------------------------------  507

Query 1409  GTAAAATCTGTGAGAAAGCCTTTATCCGAAGCACTCACCTGACTCAACATCAGAGGATTCACACAGGAGAGAAA  1482
                                                                                      
Sbjct  508  --------------------------------------------------------------------------  507

Query 1483  CCCTATAAATGTAATAAATGTGGGAAAGCTTTTAACCAGACTGCAAACCTCATTCAGCATCAGAGACATCATAT  1556
                                                                                      
Sbjct  508  --------------------------------------------------------------------------  507

Query 1557  TGGAGAGAAG  1566
                      
Sbjct  508  ----------  507

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