Construct: ORF ccsbBroadEn_09983

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011928.1_s300c1, BRDN0000394335
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF454 (285676)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 285676 ZNF454 zinc finger protein 454 NM_001178089.3 99.9% 99.8% 497A>C
2 human 285676 ZNF454 zinc finger protein 454 NM_001178090.3 99.9% 99.8% 497A>C
3 human 285676 ZNF454 zinc finger protein 454 NM_001323306.2 99.9% 99.8% 497A>C
4 human 285676 ZNF454 zinc finger protein 454 NM_182594.4 99.9% 99.8% 497A>C
5 human 285676 ZNF454 zinc finger protein 454 NM_001323307.2 24.3% 18.3% (many diffs)
6 human 285676 ZNF454 zinc finger protein 454 NM_001323308.2 24.3% 18.3% (many diffs)
7 human 285676 ZNF454 zinc finger protein 454 NM_001323309.2 24.3% 18.3% (many diffs)
8 human 285676 ZNF454 zinc finger protein 454 NM_001323310.2 24.3% 18.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1635
ORF length:
1566
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGCTGTCAGC CACCTGCCAA CCATGGTCCA GGAATCGGTG ACCTTCAAGG
121ATGTGGCTAT ACTGTTCACC CAGGAAGAGT GGGGGCAGCT GAGCCCCGCC CAGAGGGCCC
181TGTACAGGGA CGTGATGCTG GAGAACTACA GCAACCTGGT CTCACTGGGA CTCTTAGGAC
241CCAAACCAGA TACGTTTTCC CAGCTAGAAA AAAGGGAAGT GTGGATGCCA GAGGACACCC
301CTGGAGGCTT CTGTCTTGAC TGGATGACTA TGCCTGCCAG TAAGAAATCT ACTGTCAAGG
361CAGAGATTCC TGAAGAAGAA TTGGATCAAT GGACAATAAA GGAAAGATTC AGTAGCAGTA
421GTCACTGGAA GTGTGCTAGC CTGCTGGAGT GGCAATGTGG AGGCCAGGAG ATCAGTTTGC
481AGCGAGTGGT ACTCACTCAC CCCAACACCC CATCACAGGA ATGTGATGAA TCCGGGAGCA
541CTATGAGCTC ATCTCTTCAC AGTGCTCAAA GTCAGGGATT TCAACCTAGC AAAAATGCCT
601TTGAGTGTAG TGAGTGTGGA AAAGTCTTCT CTAAGAGTTC AACTCTTAAT AAACATCAGA
661AAATTCATAA TGAAAAAAAT GCAAATCAGA AAATTCATAT TAAGGAGAAA AGATATGAAT
721GTAGAGAATG TGGGAAAGCC TTTCACCAGA GTACGCACCT TATCCATCAC CAAAGAATTC
781ACACTGGCGA GAAACCCTAT GAATGTAAGG AATGTGGCAA GGCCTTCTCA GTGAGCTCCT
841CACTTACGTA CCATCAGAAA ATTCATACTG GAGAGAAGCC TTTTGAATGC AACTTATGTG
901GAAAAGCTTT TATCCGAAAT ATACACCTTG CCCATCATCA TAGAATACAT ACTGGAGAGA
961AACCTTTTAA ATGTAACATT TGTGAAAAAG CCTTTGTGTG CAGGGCACAC CTTACCAAAC
1021ACCAGAATAT CCACAGTGGA GAGAAACCCT ATAAATGCAA TGAATGTGGA AAAGCCTTTA
1081ATCAGAGTAC AAGTTTCCTT CAGCATCAGA GAATTCACAC TGGAGAGAAA CCCTTTGAAT
1141GTAATGAATG TGGGAAGGCC TTCAGGGTGA ACTCTTCCCT TACTGAACAT CAGAGAATTC
1201ATACTGGAGA GAAACCTTAT AAATGTAATG AATGTGGGAA AGCTTTCAGG GATAATTCAT
1261CCTTTGCACG ACATCGGAAA ATTCACACTG GAGAGAAACC TTACAGATGT GGCTTGTGTG
1321AGAAAGCCTT TCGGGACCAA TCAGCACTAG CCCAACATCA GAGAATTCAT ACTGGGGAAA
1381AACCTTATAC ATGTAACATA TGTGAAAAAG CCTTCAGTGA CCATTCAGCC CTTACCCAAC
1441ATAAGAGAAT TCATACTAGG GAAAAACCTT ACAAATGTAA AATCTGTGAG AAAGCCTTTA
1501TCCGAAGCAC TCACCTGACT CAACATCAGA GGATTCACAC AGGAGAGAAA CCCTATAAAT
1561GTAATAAATG TGGGAAAGCT TTTAACCAGA CTGCAAACCT CATTCAGCAT CAGAGACATC
1621ATATTGGAGA GAAGTTGCCA ACTTTCTTGT ACAAAGTtgg cattataaga aagcattgct
1681tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)

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