Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09988
Subject:
NM_001351000.1
Aligned Length:
1275
Identities:
1160
Gaps:
114

Alignment

Query    1  ATGTTCCCACCAGCCAGGGGGAAGGAGCTGCTCTCGTTTGAGGATGTGGCGATGTACTTCACCAGAGAGGAGTG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTTCCCACCAGCCAGGGGGAAGGAGCTGCTCTCGTTTGAGGATGTGGCGATGTACTTCACCAGAGAGGAGTG  74

Query   75  GGGCCACCTCAACTGGGGTCAGAAGGACCTCTACCGAGATGTGATGTTGGAGAACTACAGGAACATGGTCTTGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGGCCACCTCAACTGGGGTCAGAAGGACCTCTACCGAGATGTGATGTTGGAGAACTACAGGAACATGGTCTTGC  148

Query  149  TGGGATTTCAGTTTCCCAAACCTGAGATGATCTGTCAGCTGGAGAACTGGGACGAGCAGTGGATCCTGGATCTA  222
            ||                                                                        
Sbjct  149  TG------------------------------------------------------------------------  150

Query  223  CCGAGAGCTGGGAATAGGAAGGCTTCCGGTAGTGCTTGCCCAGGTTCTGAAGCCAGACACAAGATGAAAAAGCT  296
                                                      ||||||||||||||||||||||||||||||||
Sbjct  151  ------------------------------------------GGTTCTGAAGCCAGACACAAGATGAAAAAGCT  182

Query  297  AACTCCAAAACAGAAATTTTCTGAAGATTTAGAGTCATATAAGATATCAGTGGTAATGCAGGAATCAGCTGAGA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  183  AACTCCAAAACAGAAATTTTCTGAAGATTTAGAGTCATATAAGATATCAGTGGTAATGCAGGAATCAGCTGAGA  256

Query  371  AACTTTCAGAAAAGTTACATAAGTGTAAAGAATTTGTGGACAGTTGCAGGCTTACTTTCCCTACTAGTGGTGAT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  257  AACTTTCAGAAAAGTTACATAAGTGTAAAGAATTTGTGGACAGTTGCAGGCTTACTTTCCCTACTAGTGGTGAT  330

Query  445  GAATACAGCAGGGGCTTCCTTCAAAACCTTAACCTTATTCAAGATCAGAATGCGCAAACAAGGTGGAAGCAGGG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  331  GAATACAGCAGGGGCTTCCTTCAAAACCTTAACCTTATTCAAGATCAGAATGCGCAAACAAGGTGGAAGCAGGG  404

Query  519  CAGATATGATGAGGATGGCAAACCCTTCAATCAAAGATCTTTGCTTTTGGGGCATGAGCGAATTCTCACAAGAG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  405  CAGATATGATGAGGATGGCAAACCCTTCAATCAAAGATCTTTGCTTTTGGGGCATGAGCGAATTCTCACAAGAG  478

Query  593  CAAAGTCTTATGAATGCAGTGAATGTGGAAAAGTCATTAGGCGTAAGGCATGGTTTGATCAACATCAAAGAATT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  479  CAAAGTCTTATGAATGCAGTGAATGTGGAAAAGTCATTAGGCGTAAGGCATGGTTTGATCAACATCAAAGAATT  552

Query  667  CACTTTTTAGAGAATCCTTTTGAGTGTAAGGTCTGTGGGCAAGCCTTCAGACAGCGGTCAGCTCTTACGGTCCA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  553  CACTTTTTAGAGAATCCTTTTGAGTGTAAGGTCTGTGGGCAAGCCTTCAGACAGCGGTCAGCTCTTACGGTCCA  626

Query  741  TAAACAGTGTCACCTGCAAAACAAGCCATACAGATGTCATGACTGTGGAAAGTGTTTTCGGCAGCTCGCGTATA  814
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct  627  TAAACAGTGTCACCTGCAAAACAAGCCATACAGATGTCATGACTGTGGAAAGTGTTTTCGGCAGCTCGCGTATC  700

Query  815  TTGTTGAACATAAGAGGATTCACACCAAAGAAAAACCTTATAAATGTAGCAAATGTGAAAAAACGTTTAGTCAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  701  TTGTTGAACATAAGAGGATTCACACCAAAGAAAAACCTTATAAATGTAGCAAATGTGAAAAAACGTTTAGTCAG  774

Query  889  AATTCAACCCTTATTCGACATCAGGTGATCCATAGTGGAGAAAAACGCCATAAATGCCTTGAGTGTGGAAAAGC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  775  AATTCAACCCTTATTCGACATCAGGTGATCCATAGTGGAGAAAAACGCCATAAATGCCTTGAGTGTGGAAAAGC  848

Query  963  CTTTGGCCGGCATTCAACCCTTCTATGTCATCAACAGATTCACAGTAAACCGAACACCCATAAATGCAGTGAAT  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  849  CTTTGGCCGGCATTCAACCCTTCTATGTCATCAACAGATTCACAGTAAACCGAACACCCATAAATGCAGTGAAT  922

Query 1037  GTGGACAGTCCTTTGGTAGGAATGTGGATCTCATTCAGCATCAAAGAATCCATACAAAGGAGGAATTCTTTCAA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  923  GTGGACAGTCCTTTGGTAGGAATGTGGATCTCATTCAGCATCAAAGAATCCATACAAAGGAGGAATTCTTTCAA  996

Query 1111  TGTGGAGAATGTGGGAAAACGTTTAGTTTTAAGAGGAATCTTTTTCGACATCAGGTCATTCACACTGGAAGCCA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  997  TGTGGAGAATGTGGGAAAACGTTTAGTTTTAAGAGGAATCTTTTTCGACATCAGGTCATTCACACTGGAAGCCA  1070

Query 1185  ACCCTACCAATGTGTCATATGTGGAAAATCTTTCAAGTGGCACACAAGCTTTATTAAGCACCAGGGCACTCACA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1071  ACCCTACCAATGTGTCATATGTGGAAAATCTTTCAAGTGGCACACAAGCTTTATTAAGCACCAGGGCACTCACA  1144

Query 1259  AAGGACAGATATCCACA  1275
            |||||||||||||||||
Sbjct 1145  AAGGACAGATATCCACA  1161

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