Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10171
- Subject:
- XR_001744737.2
- Aligned Length:
- 2444
- Identities:
- 402
- Gaps:
- 2042
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG 370
Query 1 ----------------------ATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC 444
Query 53 TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC 518
Query 127 GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC 592
Query 201 TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA 666
Query 275 TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAA- 347
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAG 740
Query 348 ---------------------------------------GAACATGGAAGGGGTGCTGATGGACGTGGACTGTG 382
|||||||||||||||||||||||||||||||||||
Sbjct 741 TTGACTGAGGTCATTCCTGAGTTGCAGTATGTTGAGAGGGAACATGGAAGGGGTGCTGATGGACGTGGACTGTG 814
Query 383 AGAGCGTCTACCCCATTGTG------------------------------------------------------ 402
||||||||||||||||||||
Sbjct 815 AGAGCGTCTACCCCATTGTGTAGGCCTCTAATTGAGGCCTGGCCTCTGCTGTGGGTGAATTTCTGTACTGGAAA 888
Query 403 -------------------------------------------------------------------------- 402
Sbjct 889 CTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGAC 962
Query 403 -------------------------------------------------------------------------- 402
Sbjct 963 TTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCTCCACGACCACGCTGCTTACTTAGTAGACAACC 1036
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1037 TGTGGGACTGTGCAGGGACTCAGCTGAAGGACTGGGAGGGTCTGACAAGCCTGCTGCTGGAGAAGGACCAGAGC 1110
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1111 ACGTGCCACATGGAGCCAGGGCCAGGGACCTTCCACCTCCTAGGGTGAAACCAGGAGAGATTGCTTGCTTCACT 1184
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1185 TGTACAAGGCAGGAACGGTGGCATGGGGTGGGGGAAACTTGGAGTTGGAAGGTGGCTAATCTTTGATTCTATGT 1258
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1259 TTTTGATCCTCCTGGCACTCCAGACCTGGGTGATGTGCAGGAGAGCACACTGATAGAAATCCTTGTGTCCAGTG 1332
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1333 CCCAGCAACTCCTGCCTCAGCCTCCCGAGCAGCTGGGACTACAGGCGCCCGCCACCACGCCTGGCTAACTTTTT 1406
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1407 TGTATTTTTAGTAGAGACGGGTTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCTTGACCTTGTGATCCACCT 1480
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1481 GCCTCATCATCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCAGCATGTTAGACAATTTTTAATTCA 1554
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1555 TCCTCTCTGTGCTGTTGTTTTCTCAGCTGTGAAAGGAATATTCTGGTGGGGACAAGGTTACAGAGTTGCTGAGA 1628
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1629 GGGTCTCATGACATGAAGGTACTGGCCTTGGCACAGTGCCTGGGGGGGCGGGGACTCCGCACATGCCTGTGATG 1702
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1703 TCACAGTTACTGTCAGTTCACAGCGAACCTTCCCTCCTTTTCCTGTTGACTTTCCCACACTCCTGTAACCCTCC 1776
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1777 CTCCCTCCCTTCTTCCTCTCTCTCTCTCTCACTCACGCACACGCACACACACACACACACACACACACACACAC 1850
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1851 ACTCCATTCTCTGTCTCCATGACTCTGGAGTAAACTAACGTCTCGAGTTGCCATTGGAAGCCCCATTGTCCTCA 1924
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1925 TTTTGTTTTGTTTTGTTTGTTTGAGACGGGGTCTCGCTCTGTCCCCCAGGCTGGAGTGCAGTGGTGCGATCTCA 1998
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1999 GCCCACTGCAGCCTCCGCCTCCTAGGTTCAAGCGATTCTCCTGCCTCACCCTCCTGAGTAGCTGTGATCATAGG 2072
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2073 TGCCCGCCACCACACCCGACTAATTTTTGTGTTTTTTAGTAGAGACAGGGTTTCACTATGTTGGCCAGGCTGGT 2146
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2147 CTCAAACTCCTGACCTCAGGTGATCCGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGCCACCA 2220
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2221 TGCCCAGCCTCCGTTGTCCTCATTTAGACTTTCATGGGTTATAGGCACTTTTGACTTCCTGGGGTCCTTCTTCA 2294
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2295 GTTAAAAAAAAAAATTAGAAAATTAGGCCGGGCGTGGTGGCACATGCCTGTAATCCCAGCACTTTATGAGGCCG 2368
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2369 AGGTGGGAGGATCACCTGAGGTCGGGAGTTCAAGACCAGCCTGACCAATGTGGAGAAACCCCGTCCCTACTAAA 2442
Query 403 -- 402
Sbjct 2443 AA 2444
