Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- NR_027622.1
- Aligned Length:
- 6057
- Identities:
- 64
- Gaps:
- 5985
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATCCGCCGGCTGGCGCCCCTGGAATGGGGAGGTCGGCCGCCTGGCGGGGCCAGCGGTCCTTAGCGGTGCCTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTCCCCTCTTCCCTCCGCTCCTGCTGTGCGGGAACTGGAGAATCGTTAGGACGTGGAGGAAGCAGAGAAGTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCAGAGAACAGGAGGGCTGGGAAGAGTCCTGGTTTCTCAATCCTGACTGAGCATCTGAATCACCTGAGAAGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTAAAATGCAGATTCCCCGACCCCATCCCCTTAGAGTCAGAGTCTGTGCATTTAGGGTGCGGCCTTTCTCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGATCGACTGAGACCTACTGAACCCTAGAAGTCTTTACCTGAGGCAGTTCCTGCAATGTACTGTATATTTCAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GACATTCCATGTAAAAGATGACAAGACCGAGACCGTTGAGTGACAGAGATAAGAACTGACTTATCTAAGGCTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACAGGTGGTAGATGGCAGAGCCGAGACCTGAGCCAATTATCTTTTCTCCTGCACTGTGCGGGGTAATACAGCTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTTTAAAACAAGCTGGAGTCTCCATTCCGTTTTCCGCGTTGCTTCTCACAACTCACTGTTAGAATCCAGAAGTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAGAACCCGGGGAAGCGTAAGGAAGATGAATAGGACAAAGATTCTAAGAAGGTGGGAAGGAAGAAGGCTGCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTATTTCAAGTCTGGTGAATTTCAATCACTGTAGCCTTTATTGTTATTTTAGAGCCACCTAGACCAAAAGAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGAGCTCAAATTGCTGGTGAAAGAAGACTGCAGCTGAGTTCTATTATCAAAGCAAAGTGCTGTACTGTACTTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAATAACTCTAGCAAATACTGTGCTTCCTGCACAGAACCTGTTGGATTACTCACACAAATGTCAAAGAACAGGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGACATTTTAGCAAGTTATCAGCCTGGCCCATATAAAAAAAGACATTTCTAGTTTTTACACTTTGCAGGGTTCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGAGCAGTTGAATGTTATTTTTAGTCTATGATCCAAAGCAGCTAATGACAGAGTCTACCTTAGAAGATAAACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCTTCTGATTTATAACACAAGGCTAATGGTAGATATTGTGTGATGTGTCCAGTTAAATTAACGAAATAGCTTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCAACAGTGTGGAGTAAAGACTTAGGCTTAAAACAGAGAATTTGAGGATTGAGATAAGTCCAGAGAAGCAGCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GATGGAGTGCAGATGCAAGAGAAAGGCTATGTCAATGCCATATTATAAATATAGCTCATAGACAGCATATCCTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTGTGTGTCTGAAGAGGCCTGTGCCCTTGAGGAAAGGGGAGATTATGACCTTGTCCCCCAGTGTCATTTGCATA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AATTCTTAGAGACCTTGGGGCAGTGAGTAGGAGACTGGTTGAGATGATTACTATAGGAAAATTGAATAACTTAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGTATGGATATCTTACTGTTACAGGAAATGCTTAGGAGGTGAGGTACTCTGAATTTAGAATATGATGGCCTAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGATTCGGAGTCAAGAAGCAGGACATGGGATGAAGATACATCCACTGTCAAGCTGGTCATTACGACAGGGAGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATAGCCCTCCACAGAGTGAGACTAGTGAGACTTGCAAGAATTGAATGATGGTCCCGTTGGACGAAACTCTTTAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGTGAGTTTGCTTGTCTGGGAAAGACAGAACTCAGAGCCCTAATTGAGATGAACTGCAAGATGGGTTCAGCAGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGAAAGTGGCTGGAAAGGGGGAGGGACCAGGAGCCAAATGGGTGACTATCTGCCAGGTGGTCTCCTGAGGGCAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCATCTTCCCTGGTGGTGTGACTAGAAAGAGGGAGTCCAAAGCACAGTCCCTTCTCCTCCACTTGGCACACATC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AACACTTTCCTCTTTTCCTGTGAGCCAAGGTAGAAGGTCTGGTCCAGAATGGACGATATGGGTGGAGGGGTGAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCAGTATTGTTTTTCATGTTGGTGGTTGGACTCAGTTTAAAAGATGGATGTCTTAGGGTAGTAGGTAGCATAGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTTCCTAGCTTTGTTGTCACAGGTGATAGAAGCTGGACCATAAGTTAGGGTCACAGCTCCCTTGATTCTCCTTC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTCTTTGTTCTCCTTCCTCTTTCACAACTCTCTCTCCTAGGTACTTTTAGTCAGGCTGCAGATGGAATTCTGGG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CGTTTGCTCCAGAGAGAATTTTCCTAGGTAGCTTTTGCGTTAAACAGACTTCATTATACATTTTGCTTTGCATG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGGCCTCTCTCTCCTGACACAGATACATGGGCCCCTTGTAGCCCACAGCCCCCAGTGTCACACATTAGTGGCAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGGCTTGGTTTTGACATTGGTTCAAGGTACCCAGTGAAGAGCACTTTCTGTAAGAACAGTTCAATGGCAGGACC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CATAATGGTTATGAGCACGGAGGCCTCCAGTGCAGGAGCATCCGCAGTGGTTGCTGATCCCCAGAAGGGAGACG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TACTCTCTTTCTTTTTGTGTTTCCAAAGGCAAAGGCATACTCTTAGGAGGCAGACAGAAAGATGTACAGTTAAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AAGTGGGGTTTTTAGGTTCTGTTAACAGCTGGTTTATTACCTTTTTTGGAACTTTCTCACCCTTTCTGCAGTGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AATAGGCTATTTCTCTATGTAGGAGTACACCTGTGGGGAAAAAAATGTGTGGAAACCTAGCTATTCCCCAAAAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGAGCACAAAAAGAAGGACATCTGAGATTGCTGAATACTTTTCAGATGACAAAGAACTTAGAATGTTGAGAGGG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GACTTACAGGGAATGGGCTGATAAAAGACTTGAGTGTCATCTAGTATTTACCCCTTTCTCCTCCAACTTGAGTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AGCTAAATACACACACACACACACACACACACACACACACACACACGAATATACCTGCTTATAATAAACGCTCT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AATCAACAAATCTACTGGATCATAAGCTCTGCCAAGGTAGCGCCTGTGGTGTTCCCTTTTTATCCTTAGCCTGT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGCACCAGGCCTGGCACATAGATTCTTGGTAAATATCTACTGAGTGAATGAATTGTTGAACAGCTCGTAATGAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GAACTGATTCTGAGAATCTGTGGAATACTTCAAAAGAGAATGAATACAATGCATATATTAAAAGAGGAGGCAGT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTGCAGCCACTGCCACCTCCGCCACCGCCAGCTGTGCGGGTGAGCATCCCCAGGCAGCACGTTGGAAGTTGTTT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TCAACCATATCCAGCCCTTGCCAAATACATCCTGTTTGTCACACATCCAAAGTGAGGTCCCTCCAGCTATAAGG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGGGCACCATGGCAGAGAAGTTTTTGACTGTCTCTACTGCAGGGACCCCTTGCAGAGGAAAAAGTATGTGCAGA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AGGGTGACCACCACTGCTGCCTGAAATGCTTTGACAGGTTCTGTGCCAACACCTGCGTGGAATGCTGCAAGCCC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ATCCATGTGGACTCCAAGGAGGTGCACTATAAAAACTGCTCCTGGCATGACCCCTGCTTCCACTGTGCCAAGTG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CCTTCACCCCTTGCCAATGAGACCTTTGTGGCCAAGGACAACAAGATCCTGTGCAACAAGTTTGCCACTCAGGA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GGACTCTCCCAAGTGTAAGGGGTGCTTCAAGGCCTTTGTGGCAGGAGATCAAAAATGGAGTACAAGGGGACCAT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CTCGCACAAAGACCGCTTCACCTGTAGCAACTGCAAGCAAGTCATGGGGACTGGAAGCTTCTTCTCTAAAGGGA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AGGACTTCTACTGTGTGACTTGCCATGAGACCAAGTTTGCTAAGCATTGTGTGAAGTGCAACAAGGCCATCGCA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TCTTGGGGAGTCACTTACTAGGATGAGCCCTGGCATGCCGAGGGCTTTGTATGTGTTACCTGCTCTAAGAAGCT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GGCTGTGCAGCATTTCACCACTGTGGAGGACCAGTAATACTGTGTGGATTGCTACAAGAACTTTGTGGCCAAGA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AGTGTGCTGGATGCAAGCACCCCATCACTGGGTTTGGTAAAGGCTCCAGTGTGGTGGCCTATGAAGGACAATCC 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TGGCACGACTGCTGCTTCCACTGCAAAAAATGCTCTGTGAATCTGGCCAACAAGCACTTTGTTTTCCACGAGGA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GCAAGTATATTGCCCTGACTGTGCCAAAAAGTTGTAAACTGACAGGGGCTCCTGCCCTGTAAAATGGAATTTGA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 ATTTTGCTCTTTGTGTCCTTACTCTCTGCCCTATACCATCAATGGGGAAGAGTGGTCTTTCCCCTCTTTAAAGG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 TCTCCTGTCTTTTCTCCCGTTTTACAGTATTACTCAAATAAGGGCACACAGTGATCATATTAGGATTTAGCAAA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 AAGCAACCCTGCAGCAAAGTGAATTTCTGTCCAGCTGCAACTGAAAAACGAAAATTTAAGTAGATTGACTCTTC 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TGCATGTTTCTCACAGAGCAGAAAAGTGCTAGTCATTTAGCCACTTAGTGATGTAAGCAAGAAGCATATGAGAT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 AAAGCCCCCACTGAGATGCCTCTTGCGGCTCAGCTGGGACCTACCGTGTAGTCACGCGACATGCAAGAGTTGTA 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 GTGGCTGCTTCAACTCGCTGCTCACCCTCTTCTGTGAGCAGGAAAAGAACTTACTGACGTGCATGATTTAACTT 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 CCTCATCAAAACTCTGACCTTCCTTCTGTTATTTTGTGCTTTCAAATGACTAATATGCACTTCCAGAAAATTAA 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 CATTTGAACTTAGCTGTAATTCTAAACTGACCTTTCCCCATACTAATGTTTGATTTCCCCATGTGGCATGTTTT 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 CTGAGTGTTCCTACCTTAAAGCATGGAACATGCAGGTGATTTGGGAAGTGTAGGCAGATCTGAGAAAACGAGCC 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 TGTTTCAGAGGAACATTGTCACAGCAAATACTTCTGGAAACTTAACAAAACCAACCCTGATGTCCTTTTTATTG 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 TTTTTAATTAGGAATATTTTTGTTTTAATTGATAGCAAAATAGTTTATAGGTTTGGAAACATCCATGAAAATAT 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 TCTATTTATTTTATTTTATTATTATTATTATTTTTTGAGACGGAGCCTTGCTCTGTCGCCCAGGCTGCAGTGCA 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 GTGGCGCATTCTCAGCTCACTGCAACCTTCGCCTCCCAGGTTCAAGCAATACTCCTGTCTCAGCCTCCTGAGTA 5106
Query 1 ---------------------------------------------------------ATGGGGTTTCTCCATGT 17
||||||||||..|||.|
Sbjct 5107 GCTGGGACTACAGGCATGCGCCACCACACCCAGTTAATTTTTGAATTTTTAGTAGAGATGGGGTTTCAACATAT 5180
Query 18 CGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------- 72
.||||||||||||||.|||||||||||||||||||||||.|||||||..||||||
Sbjct 5181 TGGTCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCACCTAGGCCTCCCAAAATGTTGGCATTACAG 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 GCGTGAGCCGCCATGCCTGGCCTGCATGAAAATATTCTAGCCCTTTCAGATGTTCCTGTAGTGTTGAAATTCAT 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 CCTATGGAAGTAACTGCAAAACTCTATAGGGGGAGTTGAGCAGGTGCCAGGACTGTCATCAACATGGATATGAC 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 AGTACAGAGCAGTGGTGAGTTGAATCCCTTGTAACGCAGTTGTCTGCTCTTTGTCCATGTGTTAATGAGGGCTG 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 CAAAGTCCCTCCTATAGCGATTCCTAGGAATTTTCCTCAAGAGGAAATGCGGATTTCCACCTACCACTTACCTG 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 AAATACAGGATCACCTACTTACTGTATTCTACATTATTTTATGATATAATGAGACAATATCAAAAGTAAACATG 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 TAATGACTATGTGTACTAACATTCTTGTAGGAGTGGTTAGAGAAGCTGATGTCTCATTTCTACATTCTGTCATT 5698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5699 AGCTGTTATCGTCTAATGTTTCAGTGTATCCTTATGGAAATAAAGCAGCATATGAATTTAAAAAAAGAGGAGGA 5772
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5773 TTAGTCCAGGAACTACAGAATGATTAACTTACTTTTATACTGTAAAAAAGTTAGTATCCCCATGATGTTTCTCC 5846
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5847 AAAATAGTTTGAAAATAATTAGAAGAATTATAAATTATAGTGTGTCTCTCCTCTCTTACCAAGGACTAAGGGCT 5920
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5921 AAAGTATCGACATACCTCATTTTACTGTGCTTTGCAGATATGGCATGTTTTACAAATGGAAGGTTTGTGGGAAC 5994
Query 73 --------------------------------------------------------------- 72
Sbjct 5995 CCTGAGTTGAGTAAATCTATTGGCGTTGTTTTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6057
