Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_002958675.1
- Aligned Length:
- 4301
- Identities:
- 64
- Gaps:
- 4229
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTCATCCTATGAATTGGGTCATTCATGTCCTACCCAGCTAAAACAGAGGCCAGGAGCCAGGGAGGAAAAGCAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGGCCACACAACATTGTTTCCGAAATGGACTTCTCTGCAAGCCTGACTCCTGAGACTGTGCATTGTACCCTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AACCAGCTTTATCCATAGCTTCTGCGATAAATGGCTGTAAGTCTTGGACTCCTTGCTCCAAACGCAGCGACTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAATAGAACCTCCCAGCTCCCAGCCCTTCCTAGTGCCCATGGGCTTTACATAGGGCAAGAGAACATTTCTCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTATAATTGCCATCTCTTTGCTCTCTCAACATGGTGAACACCATCCGGACTCCGTGTATGTCTCAAATTACAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCTTTCTTTGCAAATGAAATATGAAATTTAGAGGCTCTTCTAAACACTTTAAATTTGATTTGACATTTTCAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCAGATGTAAGTTTTAGAGAATGAGATTCTCCATAAAAATGACCCTTTCATGCTGTGGCCTCCATAGAAGATGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCCAGGCCAGGTGCCCACATGGCAGGCATTTATTTTCTCACAGATCTGGAAGCTGCAGGTCCAACTTCGAGGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGGTGGGGTTGTTTCCTCTGAGGCCGCTCCTTCTGGCTGGCAGGGAGTCTCTTCCAGCCGTGTCCTCTGTGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTTCCTCTATGCACACGCACCTCTGGGATCTCTCTGCCTCCAAATATCATCTTTTTTTTTTTTTTTTTTTTTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGAGACAGAGTGTTGCTCCTCTTGTCCAGGCTGGAATGCAATGGCACAATCTGGACTCACTGCAACCTCCGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCCGAGTTTAAGCGATTCTTCTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TAGTTTTAGTAGAGATGGGGTCTCACCATGTTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTCTCAGCCTCTCCAAGTGCTGGGATTACAGGCATCAGCCACTATGCCCGGCTGGGATCATATGTTCCACACAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTTTGTTCAATAAGCATGGACTGCAACCACCTACATGAATATTCATAGCTCCTCCTGTAGCCTGTTGAATATGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATGTTTAGCCAACCTCTTCAGCATAAAGCTCCTGCCCAAACCCCTCCTGCTCCTAAATGTCTGTCTCTGGTGTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACCAGAGGCTGCTCTTCCCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGTGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTTTGCAAATGCATCCCTTGTGTAATTTGTAGGTCACCGCGCCATGGGAACACGCTACCATGGGAAGGGAGCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTGAGACGCGCAGGGAGGCTCCAGACAGGCTGGCCTGGGACACCAGCCGCTGCCCTTCCATAACATGGGGACAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAGAGGGCAAAAGTTCAGCCCAACACGGAGGATCTTCGGGCAGGAGATGGGGAAGAAGGAGAAGCAGGAAGGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGAGCTCAGTGTGGGGGCGCGCATGGCATCCCGGTGGGACATCTGAGGCCCACACCCACCTGCTGTCCCTCCCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCCACGGTGGCCACCGAGGGTGAAGGCCTGGGGGGAGGCAGACGCCTGGCCCTTTACTCTCCCTCCCTGTCCCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGGCCGCTGGGTGGGGGCCGTCTCTGGGATGATCCCCGAGGGCAGGATCCGGGAGTCCCTGCAGAGGCATCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTGTCTGTCTTGATGGTGGAGTGGCGGCTCCAGCTGGGCGGGACCACCAGGGGAGGGGCTTGTGCTCTGCTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTCAGCCTGGTGTGGACCCACCTCCCGGGCGCTGGCTGCAATGACTTTCTCTTTCCCTTTGCAATTGCCTTGGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCCTGCCGCACAGAGCGGCCTGTCTTTATCAGAGGTCCCTCTGCCAGGGGGAGGGCCCCAGAGAAAACCAGAAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAGGGTGAGAGACTGAGGAAGATAAAGCGTCCCAGGGCCTCCTACACCAGCGCCTGAGCAGGAAGGGGGAGGGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCATGACTACGAGGCCCTGGGAGGTCACTTTAGGGAGGGCTGTCCTGAAACCTGGAGCCTGGAGCAGAAAGTGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AACCCTGGTGCTCCAGACAAAGATCTTAGTCGGGACTAGCCGGCCAAGGATGAAGCCTCACTTCAGAAACACAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGGAGCGAATGTATCGAGACACATTCTCCTACAACTTTTATAATAGACCCATCCTTTCTCGTCGGAATACCGTC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGCTGTGCTACGAAGTGAAAACAAAGGGTCCCTCAAGGCCCCGTTTGGACGCAAAGATCTTTCGAGGCCAGGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTATTCCCAGCCTGAGCACCACGCAGAAATGTGCTTCCTCTCTTGGTTCTGTGGCAACCAGCTGCCTGCTTACA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGTGTTTCCAGATCACCTGGTTTGTATCCTGGACCCCCTGCCCGGACTGTGTGGCGAAGCTGGCCGAATTCCTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCTGAGCACCCCAATGTCACCCTGACCATCTCCGCCGCCCGCCTCTACTACTACTGGGAAAGAGATTACCGAAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGCGCTCTGCAGGCTGAGTCAGGCAGGGGCCCGCGTGAAGATTATGGACGATGAAGAATTTGCATACTGCTGGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAAACTTTGTGTACAGTGAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATTCCTGCAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CGCACGCTAAAGGAGATTCTCAGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGTGACGACATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGTG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGCAGGGGAGGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTACT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ACTTCTGGGATACAGATTACCAGGAGGGGCTCCGCAGCCTGAGTCAGGAAGGGGCCTCCGTGGAGATCATGGGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TACAAAGATTTTAAATATTGTTGGGAAAACTTTGTGTACAATGATGATGAGCCATTCAAGCCTTGGAAAGGACT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AAAATACAACTTTCTATTCCTGGACAGCAAGCTGCAGGAGATTCTCGAGTGAGGGGTCTCCCCGGGCCTCATGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TCTGTCTCCTCTAGCCTCCTGCTCATGTTGTGCAGGCCTCCCCTCCATCCTGGACCAGCTGTGCTTTTGCCTGG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TCATCCTGAGCCCCTCCTGGCCTCAGGGCCATTCCATAGTGCTCCCCTGCCTCACCACCTCCTCTCCGCTCTCC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CAGGCTCTTCCTGCAGAGGCCTCTTTCTGCCTCCATGGCTATCCATCCACCCACCAAGACCCTGTTCCCTGAGC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTGCATGCCCCTAACCTGCCTTTTCCCATCTCCCCAGCATAACCTAATATTTTTTTTTTTTTTTTGAGACGGAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TTTCGCTCTGTCACCCAGACTGGAGTGCAATGGCTTGATCTTGGCTCACTGCAAACTCTGCCTACCAGGTTCAA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GCGATTCTCCTGCCTCCGCCTCCCGAGTAGCTGGAATTACAGACGCCTGCCACCACGCACAGCTAACTTTTTTT 3552
Query 1 ---------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGA 53
|..|||||||.||||||.||.|||||||||||.||||||||||||||||||||
Sbjct 3553 TTTTTTGTATTTTTAGTAGTGACTGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGA 3626
Query 54 TCCGCCCACCTCAGCCTCC------------------------------------------------------- 72
||||||.|.||||||||||
Sbjct 3627 TCCGCCTATCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGGCCCGGCGGCACAACCAAATCTT 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 ATTAAACTCACCCTAGGCTGGCCGCGGTGACTCATGCCTATAATCCCCCAGCAATTTGGGAGGCAGAGGTGAGA 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 GAATCGCTTGAGCCCAGGAATTCGAGACCAGCCTGGGCCACATGACAAAGCCCCATCTCTACAAAAAAATTACA 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 AAAAAAAAAAAAACAGGTGTGGTGGCATGCACCTGTAGTTGAAGCTACTTGGAAGGATGAAGTGGGAGGATTGC 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 TTGAGCCGGGGAGGTGGAGGCTGCAGTGAACTGAGATCACGTCACTGAACTCCAGTCTGAGCAACAGATCGAGA 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CCCTGCCTGAAAATAAATCAATAAATAAACTCAACCGAAATGGGTATGAAAGTTGAAATGGGTATGTAAGTTGA 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 AAACCAGAAGTTTTGAGAAACATCCTTTGTTAACTTTCATCCTACAAATTGGGTCATTCATGTCCTACGCAGCT 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 AAAACAGAGCCCAGGAGCCAGGGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCTGC 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 AAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAACCAGCTTTATCCATAGCTTCTGCAATAAATGGCTGTA 4292
Query 73 --------- 72
Sbjct 4293 AGTCTTGGA 4301
