Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10320
- Subject:
- NM_153543.2
- Aligned Length:
- 2769
- Identities:
- 1251
- Gaps:
- 1305
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGTGGCGGGGTAGCCAGGCGCTACGGCACTTCTCCACCAGCCGGGTTTATTTCAAAAACAAGCTGAAGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCACTTATTGGCCAGAGCCTGTTCGGACAGGAAGTCTATAGCCAGCTCCTGAAAGAGGGCCACCGAGTAGTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGTGTTCACAGTGCCAGACAAGGATGGAAAGGCCGATCCACTGGCTTTGGCTGCAGAGAAAGATGGGACTCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGTTCAAGTTCCCTCGATGGAGACTCAAGGGTAAAACCATCAAGGAGGTAGCAGAAGCTTACCAGTCGGTGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCCGAGCTCAACGTGCTCCCCTTCTGCACACAGTTCATCCCCATGGATGTCATTGACAGCCCAAAGCATGGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCATCATCTACCACCCCTCACTCCTACCCAGGCACAGAGGAGCTTCTGCCATCAACTGGACACTAATCATGGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATAAGAAAGCTGGGTTTTCTGTTTTCTGGGCAGATGATGGTTTGGATACAGGACCCATCCTTCTTCAGAGATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGTGACGTCAAGCCCAATGACACAGTGGACTCGCTTTATAACCGGTTCCTTTTTCCTGAGGGGATCAAGGCCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGTAGAAGCCGTCCAACTCATAGCTGATGGAAAAGCGCCTCGCACTCCCCAGCCAGAAGAGGGGGCAACATAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAGGCATCCAGAAGAAGGAGAACGCTGAGGTTTCTTGGGACCAGCCTGCTGAAGGTTTGCATAACTGGATTCG 740
Query 1 ----------------------------------------------ATGGTCACTTTCTATGGCTCGACATTAC 28
|||||.||||||||.|||||..||.|..
Sbjct 741 AGGTCATGACAAGGTCCCTGGAGCCTGGGCAGAGATCAATGGACAGATGGTGACTTTCTACGGCTCATCACTGT 814
Query 29 TGAATAGCTCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTCGTTACCAAAAAT 102
|||.|||.|||||||||.||||||||||||||||.||||.|||||||||||||||.|||||.||.|||||||||
Sbjct 815 TGACTAGTTCTGTGCCTTCTGGAGAACCACTGGACATTAGAGGTGCCAAGAAGCCCGGTCTTGTCACCAAAAAT 888
Query 103 GGACTTGTTCTTTTTGGTAACGATGGAAAAGCACTGACGGTGAGAAATCTGCAGTTTGAAGATGGAAAAATGAT 176
||.|||||.||||||||.||.||||||||||||||||.|||||||||.|||||||||||.||.|||||.|||||
Sbjct 889 GGCCTTGTCCTTTTTGGGAATGATGGAAAAGCACTGATGGTGAGAAACCTGCAGTTTGAGGACGGAAAGATGAT 962
Query 177 CCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAG 250
.||.|||||.|||||||||||..||||||||||.||||||||||||||.||.||.||.|||.||||.|||||||
Sbjct 963 TCCAGCCTCCCAGTACTTTTCTGCGGGTGAGACATCAGTGGTAGAACTTACGGCCGAGGAGCTGAAGGTGGCAG 1036
Query 251 AGACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGAAGACTCAACAGACTTCTTTAAA 324
|||||||.|||||||||||||||.|||||||||||||...|||..|.|||||.|||||.||.||||||||||||
Sbjct 1037 AGACCATTAAGGTCATCTGGGCTCGAATTTTAAGCAACACCCCTGTGATTGAGGACTCCACGGACTTCTTTAAA 1110
Query 325 TCTGGAGCAAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGGGCTTCAGTTGCA 398
||||||||.||||||||||||||||..||||||||.||||||||||||||||..||.||.|||||||||.||||
Sbjct 1111 TCTGGAGCGAGCTCAATGGATGTTGTGAGGCTGGTGGAAGAGATCAGACAGAGTTGCGGAGGGCTTCAGCTGCA 1184
Query 399 GAATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAAACTGAGAGGAGAAG 472
|||||||||.|||||.||||||||||||||||.||..||.|||||||||||.|||.|||.||||||||||||.|
Sbjct 1185 GAATGAAGACGTCTACATGGCCACCAAGTTTGGAGATTTCATCCAAAAGGTTGTGCGGAGACTGAGAGGAGAGG 1258
Query 473 ATCAAGAGGTGGAGCTGGTTGTAGATTATATTTCAAAGGAGGTCAATGAAATCATGGTAAAAATGCCATACCAG 546
|..||||||..|||.||||.||.|||||..||||.||||||||.||.|..||.|..||.|||||.||.||||||
Sbjct 1259 ACGAAGAGGCAGAGATGGTGGTGGATTACGTTTCCAAGGAGGTGAACGGGATGACAGTGAAAATCCCCTACCAG 1332
Query 547 TGTTTCATAAATGGACAGTTCACAGATGCAGACGATGGAAAGACTTACGACACTATCAACCCAACAGATGGATC 620
||||||||||||||||||||....|||||.||.||||||.|||||||||.||||.|||||||.|||||||||.|
Sbjct 1333 TGTTTCATAAATGGACAGTTTGTGGATGCCGAGGATGGAGAGACTTACGCCACTGTCAACCCCACAGATGGAAC 1406
Query 621 TACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCAGCAGCAAAAGATGCTTTTG 694
|||||||||||.|||.||||||||||||||.|||||||||||.|.|||||||||.|||||.||.||.||.||||
Sbjct 1407 TACAATATGCAGAGTGTCCTACGCTTCTTTAGCGGATGTTGACAGAGCAGTAGCCGCAGCCAAGGACGCCTTTG 1480
Query 695 AAAACGGTGAATGGGGAAGAATGAATGCAAGAGAAAGAGGAAGATTGATGTATAGACTTGCAGACCTACTGGAA 768
|.|||||.||||||||.||.|||||.||.|||||.|||||||||.|.|||||.|||||.||.||||||.|||||
Sbjct 1481 AGAACGGCGAATGGGGGAGGATGAACGCCAGAGACAGAGGAAGACTCATGTACAGACTCGCTGACCTAATGGAA 1554
Query 769 GAGAACCAAGAAGAGCTGGCAACTATTGAAGCCCTTGATTCAGGGGCTGTCTATACCTTGGCCCTGAAGACACA 842
||.|||||||||||||||||.||.||.|||||.||.|||||.|||||||||||.|||.||||.||||||||.||
Sbjct 1555 GAAAACCAAGAAGAGCTGGCCACCATAGAAGCGCTGGATTCCGGGGCTGTCTACACCCTGGCTCTGAAGACTCA 1628
Query 843 CATTGGAATGTCTGTGCAAACATTCAGATATTTTGCTGGCTGGTGCGACAAAATTCAGGGTTCTACTATTCCAA 916
||||||||||||||||||.||.||||||||.||.||.||||||||.||||||||||||||||||||.|||||||
Sbjct 1629 CATTGGAATGTCTGTGCAGACGTTCAGATACTTCGCAGGCTGGTGTGACAAAATTCAGGGTTCTACAATTCCAA 1702
Query 917 TCAACCAGGCCCGTCCAAATCGCAATCTGACCTTCACCAAGAAAGAGCCACTCGGTGTCTGTGCCATTATTATT 990
|||||||||||||.||.|||..|||.|||||||||||||||||.||||||||.||||.||||||||||||.|||
Sbjct 1703 TCAACCAGGCCCGGCCGAATTACAACCTGACCTTCACCAAGAAGGAGCCACTTGGTGCCTGTGCCATTATCATT 1776
Query 991 CCCTGGAACTACCCGCTGATGATGCTGGCATGGAAGAGTGCTGCGTGTTTGGCAGCAGGCAATACCTTAGTGCT 1064
||.|||||||||||.||||||||||||||.||||||||.||.|||||..||||.||||||||.|||.|.|||||
Sbjct 1777 CCTTGGAACTACCCACTGATGATGCTGGCCTGGAAGAGCGCAGCGTGCCTGGCGGCAGGCAACACCCTGGTGCT 1850
Query 1065 CAAGCCAGCACAGGTCACGCCCTTGACTGCTTTGAAGTTTGCAGAACTGTCTGTGAAAGCAGGCTTTCCAAAGG 1138
||||||.|||||||||||.||||||||.|||.|||||||||||||.|||.|.||||||||.||||||||.||||
Sbjct 1851 CAAGCCTGCACAGGTCACACCCTTGACGGCTCTGAAGTTTGCAGAGCTGACCGTGAAAGCTGGCTTTCCCAAGG 1924
Query 1139 GGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGACAACGTCTGTCTGAACATCCTGACATCCGCAAA 1212
||||.||.||||||||||||||||||||.||..|.||||||||..|.||.|||.|.||.||||||||||||||.
Sbjct 1925 GGGTGATTAACATCATTCCAGGCTCAGGGGGTGTCGCAGGACAGAGGCTCTCTCAGCACCCTGACATCCGCAAG 1998
Query 1213 CTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATCATGAAGAGCTGTGCTGTTAGCAACTTGAAGAAAGT 1286
|||||.||||||||||||||..|..|.|||||||||||||||||.|||||||||||.||||||.||||||||||
Sbjct 1999 CTTGGCTTCACTGGATCCACCTCAGTGGGCAAACAGATCATGAAAAGCTGTGCTGTGAGCAACCTGAAGAAAGT 2072
Query 1287 TTCCCTTGAGCTTGGTGGCAAGTCTCCACTTATAATATTTAATGACTGTGAACTTGACAAGGCTGTGCGAATGG 1360
|||||||||||||||||||||.||.|||||.||||||||.|.|||.|||||.|||||.||||||||.||.||||
Sbjct 2073 TTCCCTTGAGCTTGGTGGCAAATCCCCACTGATAATATTCAGTGATTGTGACCTTGAAAAGGCTGTACGGATGG 2146
Query 1361 GCATGGGAGCAGTATTTTTCAACAAAGGAGAGAACTGTATTGCTGCTGGGCGGTTGTTCGTGGAAGAATCCATC 1434
|||||||.|||||.||||||||.||||||||||||||.|||||.|||||||||.||||.||||||||..|||||
Sbjct 2147 GCATGGGCGCAGTGTTTTTCAATAAAGGAGAGAACTGCATTGCAGCTGGGCGGCTGTTTGTGGAAGAGGCCATC 2220
Query 1435 CACGACGAATTTGTGACAAGAGT-------------------------------GATCCAC------------- 1464
|||||||||||.||.||.||||| |||||.|
Sbjct 2221 CACGACGAATTCGTAACCAGAGTGGTGGAAGAGATTAAAAAGATGAAAATTGGAGATCCCCTGGACAGATCTAC 2294
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 2295 GGACCATGGGCCCCAGAACCACAGAGCGCACTTGGAAAAGCTGCTGCAGTACTGTGAGACTGGGGTGCAGGAGG 2368
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 2369 GGGCCACACTGGTGTATGGAGGAAGACAGGTGCAGAGGCCAGGCTTCTTCATGGAACCCACTGTGTTCACAGGC 2442
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 2443 GTGGAAGATCACATGTACCTTGCCAAGGAGGAATCCTTTGGGCCTATCATGGTCATTTCTAAATTCCAAAATGG 2516
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 2517 GGACATCGATGGGGTGTTGCAGAGAGCAAATAACACTGAATATGGCTTGGCCTCAGGGGTCTTCACAAGAGACA 2590
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 2591 TCAACAAAGCCATGTATGTGAGTGACAAGCTAGAGGCGGGAACGGTTTTCATTAACACCTACAACAAGACAGAC 2664
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 2665 GTGGCAGCCCCATTTGGTGGAATGAAGCAATCTGGCTTTGGAAAAGACTTAGGTGAGGAGGCCCTGAATGAATA 2738
Query 1465 ------------------------------- 1464
Sbjct 2739 CCTGAAAATCAAAACAGTGACACTCGAGTAT 2769
