Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10376
- Subject:
- NM_001256006.1
- Aligned Length:
- 1555
- Identities:
- 436
- Gaps:
- 1091
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGCTCCTTTTTCTCTATATTAATAAGAAGTTCTGTTTTGAAAATGTTGGCGGGTTTCCAGATCTTGGTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAATACAGTACAAGGAAGAATTCACAAGATAAAATTTATAATTCCTACATGGACAAAGATGAGCATGGTTCAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATATCATGAGGCCTTATCCAGAACACACAATTCCAGACTACCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGGCAGATTCTAGACAAAGGAACTATGCTTGGGAAACAAGGCAGAAATACAGTCCTCTATCGGCAGAGTATGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGATACAGTAGTGAAGCATCAATAGATGAAGGAAACTGCATTCAGAGAATGAGAAGAACACCCCCGCTGGATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTGTCATGTACACCCTCAGAAATTGGGGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGTAAATGTGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGTCATGAAATAGAAAGTTTTCATAATAAAGGATATGAAGAAGATGTTCCAAGTGACAGCACTGCAGTCCTGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCCTGAAGATATGTCAGCTCAAGGATCATCTTCGCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATGGCACACTGGATGTGACTTTTGACTATGACTCACAAGAACAGAAGCTTCTGGTAACAGTGACAGCTGTCAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGACATCCCAACATATAACAGGACAGGTGGCAACTCATGGCAAGTACACCTTGTTCTTCTACCTATAAAGAAAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGAGAGCAAAAACCAGCATCCAGAGAGGACCATGCCCTGTCTTCACAGAAACATTTAAATTTAATCATGTTGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTGAGATGATTGGAAATTATGCAGTTCGGTTTAGACTGTATGGTGTACATCGCATGAAAAAAGAAAAGATTGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGGGGAAAAGATTTTTTATTTAACAAAATTGAATCTTCAAGGGAAAATGTCATTGCCTGTGATATTGGAACCTT 1036
Query 1 --------------------------------------------ATGTCTTGTAGTGAAAGTACATCCGCATGT 30
|||||.||||||||||||||||||.|||||
Sbjct 1037 CTTACAATCATTCTGGCTGTGACTCCCAAATGAGCGTGTCAGAAATGTCGTGTAGTGAAAGTACATCCTCATGT 1110
Query 31 CAGTCTCTCGAAGACGGGTCAGTTCCAGAAATTCTCATTAGCCTGCTTTATAATGCCACAAATGGGAGACTATC 104
||||||||.|||.|.||.|||||||||||||||||.|||.|||||||||||||||||||||.|||.||||||||
Sbjct 1111 CAGTCTCTTGAACATGGCTCAGTTCCAGAAATTCTTATTGGCCTGCTTTATAATGCCACAACTGGAAGACTATC 1184
Query 105 AGCAGAAGTGATAAAAGGCAGCCACTTAAAAAATTGGGCAGCAAACAGACCACCCAATACATATGTTAAGTTAA 178
|||||||||||||||||||||||||||.|||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGCAGAAGTGATAAAAGGCAGCCACTTCAAAAATTTGGCAGCAAACAGACCACCCAATACATATGTTAAGTTAA 1258
Query 179 CTCTACGGAAATCCACGGATCAAGAGATGTCCAAATGCAAGATATCCATCCGCAGAGGGCGGCCAAATCCAGTA 252
||||||.|||.||||.||.|||||||||||||||||||||||.|||||||||||||||||.|||||||||||||
Sbjct 1259 CTCTACTGAATTCCATGGGTCAAGAGATGTCCAAATGCAAGACATCCATCCGCAGAGGGCAGCCAAATCCAGTA 1332
Query 253 TACAAGGAAACTTTTGT-TTTCAAAGTGACCCTATTTCAGCTTTCTCATGTGACACTCATGCTGTCTGTGTATA 325
||.|||||||||||||| |||| |||||.|||||||||||||||||.|||||||||||||.|||||||||||||
Sbjct 1333 TATAAGGAAACTTTTGTCTTTC-AAGTGGCCCTATTTCAGCTTTCTGATGTGACACTCATACTGTCTGTGTATA 1405
Query 326 ACAAAAGCAGCATGAGAAGAA---AGATGATAGGCTGGATTTATTTAGGTCTCAACAGCTCTGG---AGAAGAA 393
|||||.|||||||||.||||| ||||||||||||||||||.||||||||||||||||||||| |||||||
Sbjct 1406 ACAAACGCAGCATGAAAAGAAAAGAGATGATAGGCTGGATTTCTTTAGGTCTCAACAGCTCTGGAGAAGAAGAA 1479
Query 394 CTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACGGCAAGTACGTAGATGGCAGGCGTTGCTAGAGTCACG 467
|||||||||||||||||||||||||||||||||||||.|||||||.||||||||||.|||||||||||||||
Sbjct 1480 CTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACAGCAAGTATGTAGATGGCATGCGTTGCTAGAGTCA-- 1551
Query 468 A 468
Sbjct 1552 - 1551
