Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10514
- Subject:
- NR_033712.1
- Aligned Length:
- 3325
- Identities:
- 597
- Gaps:
- 2723
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGCTTCCGTTTCCATCCCGGACCCGACAATGGGCGGGAAAAAGAAGGCTTTACACGACTACGCGGCGGAGTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCGACCTGGTGGTGAAGCACCTGATTGAGCACAGTGACTCTGGGGACACGTCTGTGGTGGAGACCCTTTACTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGGCCTGCGAGCTGCCCGTGCGCGTGCGGAGGGACCGCATCCTGGAACACCTGTCCTCGGGCAGGCAGCACG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCTGCGGACGCCCATTCTCATGTAAATGTCAGTGCCAACGCTGGTGTTTCAGGAGTCATCCCAGCGGGCTGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCTATTTTAGGATTCTCTGCCCTGCAAACGTTTCCAAAGTACGTGGACAGGCCGCCTGATGACACTACGTTTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGGGATCTGCTAGTGGCTTGCCTACTTAGGGAGTAAACCCTGTGAAGTCTCGCAGTTTTGTTAAAGTGTGCGTG 444
Query 1 ---------ATG-TGTCTTTTGTCCAGCTCA----------GCCGCCTCGGATCTCGCTGCCACCAGCCTTACT 54
||| ||.|||.|..|.||| || |||||||||||||||||||||||||||||||||
Sbjct 445 GCCACCTGAATGCTGCCTTATCACAAGC-CAGATACATACTGCCGCCTCGGATCTCGCTGCCACCAGCCTTACT 517
Query 55 GCACACCCGTGCCACCCGCCCTTGCCCCGTCAGCCTCAGCCTCAGCTCATTCTCTCAGGCAGTCCCAGCATTGG 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 518 GCACACCCGTGCCACCCGCCCTTGCCCCGTCAGCCTCAGCCTCAGCTCATTCTCTCAGGCAGTCCCAGCATTGG 591
Query 129 CACGGTACCTCCTCCCGCTGTGGGCCACACGTCTCTGCTCCCTGTCAACCCTCCTGCCATCAGCACCACCACCA 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 CACGGTACCTCCTCCCGCTGTGGGCCACACGTCTCTGCTCCCTGTCAACCCTCCTGCCATCAGCACCACCACCA 665
Query 203 GCGACTTGTCTGCCCGGGAGGATGCAACACCATCTGCCTCCACCGGCCACCTTTCAGTGTTTCCTGCTTTCCAA 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 666 GCGACTTGTCTGCCCGGGAGGATGCAACACCATCTGCCTCCACCGGCCACCTTTCAGTGTTTCCTGCTTTCCAA 739
Query 277 GTAAAGATACCAGCAGTGCCCTCAGAGCAGACCAGCCAGAGTTTTTCTGAAGCCTCCCACAGGGTGCTCCCCGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 740 GTAAAGATACCAGCAGTGCCCTCAGAGCAGACCAGCCAGAGTTTTTCTGAAGCCTCCCACAGGGTGCTCCCCGG 813
Query 351 AGGAGGCCCGAGATGCTCTCGTGACTTTGGAGCCGGGGTGGCTGGCCACCTTGGCCTGGGCATCTTTGGGGTGG 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 814 AGGAGGCCCGAGATGCTCTCGTGACTTTGGAGCCGGGGTGGCTGGCCACCTTGGCCTGGGCATCTTTGGGGTGG 887
Query 425 GCTTCGGGAGCCCGGCACTGCTGCAGAGTGTGGTGGATGAGAACAGCTGCTGCTTGCTGTACGTGGTGGAGGAC 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 GCTTCGGGAGCCCGGCACTGCTGCAGAGTGTGGTGGATGAGAACAGCTGCTGCTTGCTGTACGTGGTGGAGGAC 961
Query 499 CAGCTGTGTGATGTGGAGCAAGCCTTCAGAGCTGAGCATTTGGGCCAACACCAGAGTGGTTCGGGAACAGGATG 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 CAGCTGTGTGATGTGGAGCAAGCCTTCAGAGCTGAGCATTTGGGCCAACACCAGAGTGGTTCGGGAACAGGATG 1035
Query 573 CAGACATTGTCCTCAACGACCAGCGGCACTT------------------------------------------- 603
|||||||||||||||||||||||||||||||
Sbjct 1036 CAGACATTGTCCTCAACGACCAGCGGCACTTTGATCCGGTTTTCCAGTTCTTGCACAAGCAAGTTTGTGTCAGC 1109
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1110 CACGCCCTGGGGAGGATCCACTGGATCACCGCCGTCACTGCCTGTTCCCGGCGGCCTCTCCGGCTTCCCTAAAG 1183
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1184 AGAGCAGGTGGGACTTTCTACAACGCTGCTGTGCACGACGTGGATGCCGTATGCATGTTGCTGGGGGAAGCCAC 1257
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1258 TCCGGACACTGTGTTTTCTCTGGGACATGTCTTCTGCCCAGATATGGCCGCCTTAAAAGATGCAGATGCTGTTG 1331
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1332 TGATCAGCATGAAGTTTCCCTGTGAGGCCGTGGTTAGCGTGGACATCAGCCAGCACTGCACAGACAGCTGCGAC 1405
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1406 CAGGACGTCAGCCAGCACTGCACAGACAGCTGCGACCAGAGACTGGAGATGGAGTCTTGCCCTGTCACCCAGGC 1479
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1480 TGGAGTGCAATGGTGCGATCTCGGCTCACTGCAACCTCCGTCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCC 1553
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1554 TTCTGAGTAGCTGGGATTACACGCGTGTGCCACCACGCTCGGCTAATTTTTGTATTTTTAGTAGAGATGGGATT 1627
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1628 TCACCATGTTGGCCAGGCTGGTCTCGAACTACTGACCTCGTGATCCACCTGCCATGGCCTCCCAAAGTGCTGGG 1701
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1702 ATTACAGGCGTGAGCCACCATGCTCGGCCTAAAAAACAATTTTCTTGAAGAATCCGATTTTGTGCATAGTAATG 1775
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1776 ACACAGCACCATTCCTGAGAAATAGGAAATATATGTGTGTGGTATGAAAAGCCCATATTCTGTTCTTGTCACCT 1849
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1850 GAATCTAGGCTTCCTCTTTGGATGTGAACGCGGGAATGAACAGTGGCTGTTTTCCACCCAAAGGGGCGTGGAGA 1923
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1924 CCTTTTGGAAACGGGCTTTCTCCTTTCCATTTTGCAGCCGGGGGCGGGTGGAAACCTTCCTTCGAAGGGTAGTG 1997
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1998 CCTTGGGGAGCAGCAGACCTGCTCTGAGTCCAGCTTAGCTTTCCAAAATTCTGTGTGGAACTTACTGGAGATGT 2071
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2072 TTTTATATATTTGAAAATAATGGCCTGTATTTCTCACGCTATACTTAAAAAAAATAACTAACCTTTTAAACAAA 2145
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2146 GATATTCAAACTCACCCTTGTGCTGAAAGCACTCACATTTCTGTGTTCATTCCTGAAAGGGCGTTTTAGAGTCC 2219
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2220 CCGTTTCTACGTTCTATGTGGCACCCTCTTGCCGAGGGAACATCCAGAATCCCTCCACTTCCTGTCTAGTTTGA 2293
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2294 GGCCTCAACACCTTCATGATCCAGAGTCCTGCGGCTATGAGGGGGTGGGCCCACCACCGCCCAGCCCTCCTTGG 2367
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2368 TGGACGTGGGGACAGGTAGGAGCCTAGGGAAAGGGGTGGGCGGGCTCTGGTGTGACGGCGTGAGCGCTAGCCAG 2441
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2442 GAAGATGGGGCCAGGGCTTGGCATGGCACCTCACCTGTGGGGGAACTCGGCGGAGCTTCCTGGCGGCATCTCCC 2515
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2516 CCTCTTGCCTTGGTCCTTTCTATCTTTGTTTTAGGCCAATTTCTAAAAAGACTGAGGCCTCCTTCAAGGTTGAA 2589
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2590 CAGATTTCTAGAGCCTTGTTTTTGCTGTGACAAGTCCCTAGTCCCTGTTCACAACTCTGAAACCAAGAAACCTG 2663
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2664 AGAACCAAGAGAACTGAAATGAAGCCCGTTGGTCTCAGCCTGGCTTGAGCCAACATGAGGCTCTCTGCTGCCTT 2737
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2738 TTGTTTTCTTAGGTTTTGCTGAGAAACGGGAGTGCGTTCTGTGTCGGTGTTTGTGACGCCCTGAGACCCTGCTT 2811
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2812 GGCCTAGCTAAAGTCCAGAAGGCCTGGGCCCCACAGGGCTTGGATGAGGGCTCATGGGCCTGTACTTCAGGAGG 2885
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2886 CCTGAGAGGCCCGGTCAGTCCCATGAGGCTACTCGGCTTGGCCCGCAGGTCCTCCGAGGCACAGGGCAGAGGGA 2959
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2960 CACCCCAGGGACCCATCAGACTCACGACACAGAGAAACTCAAGTGGGGTGCCAGGGCCGGCCACAGAGGCCACG 3033
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3034 GGCTTCCTGCCTGTGAGGAGCCGCCCTGTTTGTCTGAGCCCTTTGGAGATTTAGGTTGAGTCATGAGAACCGGT 3107
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3108 CATTGGAACATACACTTTATTATGTTACAAAAACAAAAATCCCCACTGAAACACAGCTAAAAAAATAACACATT 3181
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3182 TTCCCAAGATTACATTACCAAAAACAGTTGTTATGTCATTGGAGGGCGTCCATTAATACTGCTCGGAGAAGCAC 3255
Query 604 --------------------------------------------------------------------- 603
Sbjct 3256 GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGTGCTTTAACTGGTAA 3324
