Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10548
- Subject:
- XM_006505176.3
- Aligned Length:
- 1425
- Identities:
- 640
- Gaps:
- 693
Alignment
Query 1 ATGGCGGCGAGCGCGCTGCGAGGCCTGCCAGTGGCTGGCGGAGGCGAGAGTAGCGAGAGCGAGGATGATGGCTG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGAGATTGGGTATCTCGACCGGACGTCTCAGAAATTGAAAAGGCTATTACCCATTGAAGAAAAGAAAGAAAAAT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TTAAGAAAGCAATGACCATCGGAGATGTTTCATTGGTCCAGGAGCTCCTAGATTCTGGCATTAGTGTAGATTCC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AACTTTCAGTATGGATGGACTCCCCTTATGTATGCTGCTAGTGTTGCCAATGCAGAGCTGGTTCGGGTCCTTTT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GGACAGAGGTGCTAATGCAAGCTTTGAGAAGGATAAGCAAAGTATTTTGATAACTGCATGTTCTGCTCATGGCT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CAGAGGAACAGATCTTGAAGTGTGTAGAACTACTACTTTCAAGAAATGCTGATCCAAATGTTGCTTGTAGGAGA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CTTATGACCCCAATCATGTATGCTGCTCGAGATGGTCACACCCAGGTTGTTGCTCTCCTTGTTGCTCATGGAGC 518
|||||.|||||||||||||||||.|||||.|||||.||.||||||||.|||||.|||||.|||||.|||||
Sbjct 1 ---ATGACGCCAATCATGTATGCTGCCCGAGACGGTCATACTCAGGTTGTGGCTCTGCTTGTGGCTCACGGAGC 71
Query 519 AGAAGTTAATACCCAGGATGAGAATGGTTACACTGCTTTAACGTGGGCAGCACGTCAGGGTCATAAAAATATAG 592
.||||||||..|||||||||||||||||||.|||||.|||||.|||||||||||.|||||||||||||||.||.
Sbjct 72 CGAAGTTAACGCCCAGGATGAGAATGGTTATACTGCCTTAACATGGGCAGCACGGCAGGGTCATAAAAATGTAA 145
Query 593 TTTTGAAGTTGCTTGAACTTGGAGCTAATAAAATGCTACAAACCAAAGATGGAAAGATGCCAAGTGAGATTGCA 666
||.||||||||||||||||.||||||||||||||||||||.|||||||||||.|..|..|||||.|||||||||
Sbjct 146 TTCTGAAGTTGCTTGAACTGGGAGCTAATAAAATGCTACAGACCAAAGATGGCAGAACACCAAGCGAGATTGCA 219
Query 667 AAAAGAAACAAACATCATGAGATCTTCAACTTACTTTCTTTTACTTTAAATCCATTGGAAGGAAAACTTCAACA 740
||||||||.|||||||.|||||||||||||||.||||||.|.|||.|||||||||||||||||||||||||.||
Sbjct 220 AAAAGAAATAAACATCTTGAGATCTTCAACTTTCTTTCTCTGACTCTAAATCCATTGGAAGGAAAACTTCAGCA 293
Query 741 GCTAACTAAAGAAGACACTATTTGTAAAATATTGACAACAGATTCTGATAGAGAAAAAGATCACATTTTTAGTT 814
||||||.||||||||.||.|||||||||.|.|||.|.|||||||||||||.|||||||||||||||.|||||..
Sbjct 294 GCTAACCAAAGAAGAGACCATTTGTAAACTGTTGGCCACAGATTCTGATAAAGAAAAAGATCACATATTTAGCC 367
Query 815 CATATACAGCATTTGGAGATCTGGAAGTATTTTTACATGGTCTTGGACTTGAACATATGACAGATTTACTAAAG 888
|.||||||||.|||||||||||||||.|||||||||||||.|||||||||||||||||||||||.|.|.|||||
Sbjct 368 CGTATACAGCGTTTGGAGATCTGGAAATATTTTTACATGGCCTTGGACTTGAACATATGACAGACTCATTAAAG 441
Query 889 GAAAGGGATATAACGTTAAGACATCTTTTGACCATGAGGGAAGATGAATTTACAAAGAATGGAATTACCAGTAA 962
||||.|||||||||.||||||||.|||.|||||||||.|.||||.||..|||||||||||||||||.|.|||||
Sbjct 442 GAAAAGGATATAACTTTAAGACACCTTCTGACCATGAAGAAAGACGAGCTTACAAAGAATGGAATTGCTAGTAA 515
Query 963 AGACCAGCAGAAAATTCTGGCTGCTCTTAAAGAACTACAGGTAGAAGAGATACAATTTGGAGAGCTATCTGAAG 1036
|||.||.||||||||..|||||||||||||.||||||.|.||||||||||||.|.||||||.|..||.||||||
Sbjct 516 AGATCAACAGAAAATCTTGGCTGCTCTTAAGGAACTAGAAGTAGAAGAGATAAATTTTGGAAAATTACCTGAAG 589
Query 1037 AGACAAAGTTGGAAATCAGTGGTGATGAGTTCCTCAACTTTCTTCTCAAATTAAATAAACAGTGTGGCCATTTA 1110
.|||||||||||||||||||||||||||||||||||||||||||.|.|||||||||||.|||||||||||||||
Sbjct 590 TGACAAAGTTGGAAATCAGTGGTGATGAGTTCCTCAACTTTCTTTTGAAATTAAATAAGCAGTGTGGCCATTTA 663
Query 1111 ATAACAGCTGTACAGAATGTTATTACTGAGTTACCTGTAAATTCTCAAAAGGTA--------------TTCT-A 1169
||.||||||||.||||||.|.|||||.|||||.||||||||||||||.|||.|| |||| .
Sbjct 664 ATCACAGCTGTGCAGAATATCATTACCGAGTTGCCTGTAAATTCTCACAAGATAGTACTGGAGTGGGCTTCTCC 737
Query 1170 CAAAAGTTAT---------------------------------------------------------------- 1179
||.||.||.|
Sbjct 738 CAGAAATTTTACTTCAGTTTGTGAAGAACTGGTTAGTAATGTTGAAGATTTGAATGAAGAGGTCTGCAGACTGA 811
Query 1180 -------------------------------------------------------------------------- 1179
Sbjct 812 AGGAGTTGATTCAGAAGATGCAGAATGAGCGGGAAAATGACCCAACTCATATCCCACTAGTAGAAGAGGTCTCT 885
Query 1180 -------------------------------------------------------------------------- 1179
Sbjct 886 ACATGGAAGACTCGAATTCTGAAGAGGTCAGCAGTTACAGTGTGTGGATTCGGGCTGCTGCTTTTCATCGGCAA 959
Query 1180 ------------------- 1179
Sbjct 960 GCTAACTTTGCAGAGAAAA 978
