Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10740
- Subject:
- NM_001287758.1
- Aligned Length:
- 5135
- Identities:
- 187
- Gaps:
- 4930
Alignment
Query 1 ATGCTTATAAAC---AAGTTGTGGCTGCTCCTGGTTACGTTGTGCCTGACCGAGGAACTGGCAGCAGCGGGAGA 71
|||| || ..|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGC------ACCCTGGGTTGTGGCTGCTCCTGGTTACGTTGTGCCTGACCGAGGAACTGGCAGCAGCGGGAGA 68
Query 72 GAAGTCTTATGGAAAGCCATGTGGGGGCCAGGACTGCAGTGGGAGCTGTCAGTGTTTTCCTGAGAAAGGAGCGA 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 69 GAAGTCTTATGGAAAGCCATGTGGGGGCCAGGACTGCAGTGGGAGCTGTCAGTGTTTTCCTGAGAAAGGAGCGA 142
Query 146 GA-CACAACTTG------------------------CAGCTACTGAATGATATGGCTGGCCGGCTCTACCATTT 194
|| .||.||.|| |||.|.||.||.||| |..|.||||||||...||
Sbjct 143 GAGGACGACCTGGACCAATTGGAATTCAAGGCCCAACAGGTCCTCAAGGAT-----TCACTGGCTCTACTGGTT 211
Query 195 CA--GTGA---------------GGTTCT-----GCCTAATCT----CTTT----------------------- 219
.| |.|| |||| | |||| ||| |.||
Sbjct 212 TATCGGGATTGAAAGGAGAAAGGGGTT-TCCCAGGCCT--TCTGGGACCTTATGGACCAAAAGGAGATAAGGGT 282
Query 220 -------------------------------------------------------------------------- 219
Sbjct 283 CCCATGGGAGTTCCTGGCTTTCTTGGCATCAATGGGATTCCGGGCCACCCTGGACAACCAGGCCCCAGAGGCCC 356
Query 220 -------------------------------------------------------------------------- 219
Sbjct 357 ACCTGGTCTGGATGGCTGTAATGGAACTCAAGGAGCTGTTGGATTTCCAGGCCCTGATGGCTATCCTGGGCTTC 430
Query 220 -------------------------------------------------------------------------- 219
Sbjct 431 TCGGACCACCCGGGCTTCCTGGTCAGAAAGGATCAAAAGGTGACCCTGTCCTTGCTCCAGGTAGTTTCAAAGGA 504
Query 220 -------------------------------------------------------------------------- 219
Sbjct 505 ATGAAGGGGGATCCTGGGCTGCCTGGACTGGATGGAATCACTGGCCCACAAGGAGCACCCGGATTTCCTGGAGC 578
Query 220 -------------------------------------------------------------------------- 219
Sbjct 579 TGTAGGACCTGCAGGACCACCAGGATTACAAGGTCCTCCAGGGCCTCCTGGTCCTCTTGGTCCTGATGGGAATA 652
Query 220 -------------------------------------------------------------------------- 219
Sbjct 653 TGGGGCTAGGTTTTCAAGGAGAGAAAGGAGTCAAGGGGGATGTTGGCCTCCCTGGCCCAGCAGGACCTCCACCA 726
Query 220 -------------------------------------------------------------------------- 219
Sbjct 727 TCTACTGGAGAGCTGGAATTCATGGGATTCCCCAAAGGGAAGAAAGGATCCAAGGGTGAACCAGGGCCTAAGGG 800
Query 220 -------------------------------------------------------------------------- 219
Sbjct 801 TTTTCCAGGCATAAGTGGCCCTCCAGGCTTCCCGGGCCTTGGAACTACTGGAGAAAAGGGAGAAAAGGGAGAAA 874
Query 220 -------------------------------------------------------------------------- 219
Sbjct 875 AGGGAATCCCTGGTTTGCCAGGACCTAGGGGTCCCATGGGTTCAGAAGGAGTCCAAGGCCCTCCAGGGCAACAG 948
Query 220 -------------------------------------------------------------------------- 219
Sbjct 949 GGCAAGAAAGGGACCCTGGGATTTCCTGGGCTTAATGGATTCCAAGGAATTGAGGGTCAAAAGGGTGACATTGG 1022
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1023 CCTGCCAGGCCCAGATGTTTTCATCGATATAGATGGTGCTGTGATCTCAGGTAATCCTGGAGATCCTGGTGTAC 1096
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1097 CTGGCCTCCCAGGCCTTAAAGGAGATGAAGGCATCCAAGGCCTACGTGGCCCTTCTGGTGTCCCTGGATTGCCA 1170
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1171 GCATTATCAGGTGTCCCAGGAGCCCTAGGGCCTCAGGGATTTCCAGGGCTGAAGGGGGACCAAGGAAACCCAGG 1244
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1245 CCGTACCACAATTGGAGCAGCTGGCCTCCCTGGCAGAGATGGTTTGCCAGGCCCACCAGGTCCACCAGGCCCAC 1318
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1319 CTAGTCCAGAATTTGAGACTGAAACTCTACACAACAAAGAGTCAGGGTTCCCTGGTCTCCGAGGAGAACAAGGT 1392
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1393 CCAAAAGGAAACCTAGGCCTCAAAGGAATAAAAGGAGACTCAGGTTTCTGTGCTTGTGACGGTGGTGTTCCCAA 1466
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1467 CACTGGACCACCCGGGGAACCAGGCCCACCTGGTCCATGGGGTCTCATAGGCCTTCCAGGCCTTAAAGGAGCCA 1540
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1541 GAGGAGATCGAGGCTCTGGGGGTGCACAGGGCCCAGCAGGGGCTCCAGGCTTAGTTGGGCCTCTGGGTCCTTCA 1614
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1615 GGACCCAAAGGAAAGAAGGGGGAACCAATTCTCAGTACAATCCAAGGAATGCCAGGAGATCGGGGTGATTCTGG 1688
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1689 CTCCCAGGGCTTCCGTGGTGTAATAGGAGAACCAGGCAAGGACGGAGTACCAGGTTTACCAGGTCTGCCAGGCC 1762
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1763 TTCCGGGTGATGGTGGACAGGGCTTCCCAGGTGAAAAGGGGTTACCTGGACTTCCTGGTGAAAAAGGCCATCCT 1836
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1837 GGTCCACCTGGCCTCCCAGGAAATGGGTTACCAGGACTTCCTGGACCCCGTGGGCTTCCTGGAGATAAAGGCAA 1910
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1911 GGATGGATTACCGGGACAACAAGGCCTTCCCGGATCTAAGGGTGACTGCTGCTGTAGAGAGGTTGGTAAAGGAG 1984
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1985 ACTTAGACACAGAGAGAGGAATCACCCTGCCCTGTATTATTCCTGGGTCATACGGTCCATCAGGATTTCCAGGC 2058
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2059 ACTCCCGGATTCCCAGGCCCTAAAGGGTCTCGAGGCCTCCCTGGGACCCCAGGCCAGCCTGGGTCAAGTGGAAG 2132
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2133 TAAAGGAGAGCCAGGGAGTCCAGGATTGGTTCATCTTCCTGAATTACCAGGATTTCCTGGACCTCGTGGGGAGA 2206
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2207 AGGGCTTGCCTGGGTTTCCTGGGCTCCCTGGAAAAGATGGCTTGCCTGGGATGATTGGCAGTCCAGGCTTACCT 2280
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2281 GGTTCCAAGGGAGCCACTGGTGACATCTTTGGTGCTGAAAATGGTGCTCCGGGGGAACAAGGCCTACAAGGATT 2354
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2355 AACAGGGCACAAAGGATTTCTTGGAGACTCTGGCCTTCCAGGACTCAAGGGTGTGCACGGGAAGCCTGGCTTAC 2428
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2429 TAGGCCCCAAAGGTGAGCGGGGCAGCCCTGGGACACCAGGACAGGTGGGACAGCCAGGCACCCCAGGATCTAGT 2502
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2503 GGTCCATATGGCATCAAGGGCAAATCTGGGCTCCCAGGAGCACCAGGCTTCCCAGGCATCTCAGGACATCCTGG 2576
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2577 AAAGAAAGGAACAAGAGGCAAGAAAGGTCCTCCTGGATCAATTGTAAAGAAAGGGCTGCCAGGGCTAAAAGGCC 2650
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2651 TTCCTGGAAATCCAGGCCTAGTAGGACTGAAAGGAAGCCCAGGCTCTCCAGGGGTCGCTGGGTTGCCAGCCCTC 2724
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2725 TCTGGACCCAAGGGAGAGAAGGGGTCTGTTGGATTCGTAGGTTTTCCAGGAATACCAGGTCTGCCTGGTATTCC 2798
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2799 TGGAACAAGAGGATTAAAAGGAATTCCAGGATCAACTGGAAAAATGGGACCATCTGGACGTGCTGGTACTCCTG 2872
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2873 GTGAAAAGGGAGACAGAGGCAATCCGGGGCCAGTCGGAATACCTAGTCCAAGACGTCCAATGTCAAACCTTTGG 2946
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2947 CTCAAAGGAGACAAAGGCTCTCAAGGCTCAGCCGGATCCAATGGATTTCCTGGGCCAAGAGGTGACAAAGGAGA 3020
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3021 GGCTGGTCGACCTGGACCACCAGGCCTACCTGGAGCTCCTGGCCTCCCAGGCATTATCAAAGGAGTTAGTGGAA 3094
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3095 AGCCAGGGCCCCCTGGCTTCATGGGAATCCGGGGCTTACCTGGCCTGAAGGGGTCCTCTGGGATCACAGGTTTC 3168
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3169 CCAGGAATGCCAGGAGAAAGTGGTTCACAAGGTATCAGAGGGTCGCCTGGACTCCCAGGAGCATCTGGTCTCCC 3242
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3243 AGGCCTGAAAGGAGACAACGGCCAGACAGTTGAAATTTCCGGTAGCCCAGGACCCAAGGGACAGCCTGGCGAAT 3316
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3317 CTGGTTTTAAAGGCACAAAAGGAAGAGATGGACTAATAGGCAATATAGGCTTCCCTGGAAACAAAGGTGAAGAT 3390
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3391 GGAAAAGTTGGTGTTTCTGGAGATGTTGGCCTTCCTGGAGCTCCAGGATTTCCAGGAGTTGCCGGCATGAGAGG 3464
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3465 AGAACCAGGACTTCCAGGTTCTTCTGGTCACCAAGGGGCAATTGGGCCTCTAGGATCCCCCGGATTAATAGGAC 3538
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3539 CCAAAGGCTTCCCTGGATTTCCTGGTTTACATGGACTGAATGGGCTTCCGGGCACCAAGGGTACCCATGGCACT 3612
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3613 CCAGGACCTAGTATCACCGGTGTGCCTGGGCCTGCTGGTCTCCCTGGACCCAAAGGAGAAAAAGGATATCCAGG 3686
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3687 AATTGGCATCGGAGCTCCAGGGAAGCCGGGCCTGAGAGGGCAAAAAGGTGATCGAGGTTTCCCAGGTCTCCAGG 3760
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3761 GCCCTGCTGGTCTCCCCGGTGCCCCAGGCATCTCCTTGCCCTCACTCATAGCAGGACAGCCTGGTGACCCCGGG 3834
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3835 CGACCAGGCCTAGATGGAGAACGAGGCCGCCCAGGCCCCGCTGGACCCCCAGGTCCCCCTGGGCCATCCTCGAA 3908
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3909 TCAAGGCGACACCGGAGACCCTGGCTTCCCTGGAATTCCTGGACCTAAAGGGCCTAAGGGAGACCAAGGAATTC 3982
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3983 CAGGTTTTTCTGGCCTCCCTGGAGAGCTAGGACTGAAAGGCATGAGAGGTGAGCCTGGCTTCATGGGGACTCCA 4056
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4057 GGCAAGGTTGGGCCACCTGGAGACCCAGGATTTCCCGGAATGAAGGGGAAGGCAGGGCCAAGAGGCTCTTCTGG 4130
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4131 CCTCCAAGGTGATCCTGGACAAACACCAACTGCAGAAGCTGTCCAGGTTCCTCCTGGACCCTTGGGTCTACCAG 4204
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4205 GGATCGATGGCATCCCTGGCCTCACTGGGGACCCTGGGGCTCAAGGCCCTGTAGGCCTACAAGGCTCCAAAGGT 4278
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4279 TTACCTGGCATCCCCGGTAAAGATGGCCCCAGTGGGCTCCCAGGCCCACCTGGGGCTCTTGGTGATCCTGGTCT 4352
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4353 GCCTGGACTGCAAGGCCCTCCAGGATTTGAAGGAGCTCCAGGGCAGCAAGGCCCCTTCGGGATGCCTGGAATGC 4426
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4427 CTGGCCAGAGCATGAGAGTGGGCTACACGTTGGTAAAGCACAGCCAGTCGGAACAGGTGCCCCCGTGTCCCATC 4500
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4501 GGGATGAGCCAGCTGTGGGTGGGGTACAGCTTACTGTTTGTGGAGGGGCAAGAGAAAGCCCACAACCAGGACCT 4574
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4575 GGGCTTTGCTGGCTCCTGTCTGCCCCGCTTCAGCACCATGCCCTTCATCTACTGCAACATCAACGAGGTGTGCC 4648
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4649 ACTATGCCAGGCGCAATGATAAATCTTACTGGCTCTCCACTACCGCCCCTATCCCCATGATGCCCGTCAGCCAG 4722
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4723 ACCCAGATTCCCCAGTACATCAGCCGCTGCTCTGTGTGTGAGGCACCCTCGCAAGCCATTGCTGTGCACAGCCA 4796
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4797 GGACATCACCATCCCGCAGTGCCCCCTGGGCTGGCGCAGCCTCTGGATTGGGTACTCTTTCCTCATGCACACTG 4870
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4871 CCGCTGGTGCCGAGGGTGGAGGCCAGTCCCTGGTCTCACCTGGCTCCTGCCTAGAGGACTTTCGGGCCACTCCT 4944
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4945 TTCATCGAATGCAGTGGTGCCCGAGGCACCTGCCACTACTTTGCAAACAAGTACAGTTTCTGGTTGACCACAGT 5018
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5019 GGAGGAGAGGCAGCAGTTTGGGGAGTTGCCTGTGTCTGAAACGCTGAAAGCTGGGCAGCTCCACACTCGAGTCA 5092
Query 220 ----------------------------- 219
Sbjct 5093 GTCGCTGCCAGGTGTGTATGAAAAGCCTG 5121
