Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10740
- Subject:
- NM_001287759.1
- Aligned Length:
- 5012
- Identities:
- 187
- Gaps:
- 4807
Alignment
Query 1 ATGCTTATAAAC---AAGTTGTGGCTGCTCCTGGTTACGTTGTGCCTGACCGAGGAACTGGCAGCAGCGGGAGA 71
|||| || ..|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGC------ACCCTGGGTTGTGGCTGCTCCTGGTTACGTTGTGCCTGACCGAGGAACTGGCAGCAGCGGGAGA 68
Query 72 GAAGTCTTATGGAAAGCCATGTGGGGGCCAGGACTGCAGTGGGAGCTGTCAGTGTTTTCCTGAGAAAGGAGCGA 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 69 GAAGTCTTATGGAAAGCCATGTGGGGGCCAGGACTGCAGTGGGAGCTGTCAGTGTTTTCCTGAGAAAGGAGCGA 142
Query 146 GA-CACAACTTG------------------------CAGCTACTGAATGATATGGCTGGCCGGCTCTACCATTT 194
|| .||.||.|| |||.|.||.||.||| |..|.||||||||...||
Sbjct 143 GAGGACGACCTGGACCAATTGGAATTCAAGGCCCAACAGGTCCTCAAGGAT-----TCACTGGCTCTACTGGTT 211
Query 195 CA--GTGA---------------GGTTCT-----GCCTAATCT----CTTT----------------------- 219
.| |.|| |||| | |||| ||| |.||
Sbjct 212 TATCGGGATTGAAAGGAGAAAGGGGTT-TCCCAGGCCT--TCTGGGACCTTATGGACCAAAAGGAGATAAGGGT 282
Query 220 -------------------------------------------------------------------------- 219
Sbjct 283 CCCATGGGAGTTCCTGGCTTTCTTGGCATCAATGGGATTCCGGGCCACCCTGGACAACCAGGCCCCAGAGGCCC 356
Query 220 -------------------------------------------------------------------------- 219
Sbjct 357 ACCTGGTCTGGATGGCTGTAATGGAACTCAAGGAGCTGTTGGATTTCCAGGCCCTGATGGCTATCCTGGGCTTC 430
Query 220 -------------------------------------------------------------------------- 219
Sbjct 431 TCGGACCACCCGGGCTTCCTGGTCAGAAAGGATCAAAAGGTGACCCTGTCCTTGCTCCAGGTAGTTTCAAAGGA 504
Query 220 -------------------------------------------------------------------------- 219
Sbjct 505 ATGAAGGGGGATCCTGGGCTGCCTGGACTGGATGGAATCACTGGCCCACAAGGAGCACCCGGATTTCCTGGAGC 578
Query 220 -------------------------------------------------------------------------- 219
Sbjct 579 TGTAGGACCTGCAGGACCACCAGGATTACAAGGTCCTCCAGGGCCTCCTGGTCCTCTTGGTCCTGATGGGAATA 652
Query 220 -------------------------------------------------------------------------- 219
Sbjct 653 TGGGGCTAGGTTTTCAAGGAGAGAAAGGAGTCAAGGGGGATGTTGGCCTCCCTGGCCCAGCAGGACCTCCACCA 726
Query 220 -------------------------------------------------------------------------- 219
Sbjct 727 TCTACTGGAGAGCTGGAATTCATGGGATTCCCCAAAGGGAAGAAAGGATCCAAGGGTGAACCAGGGCCTAAGGG 800
Query 220 -------------------------------------------------------------------------- 219
Sbjct 801 TTTTCCAGGCATAAGTGGCCCTCCAGGCTTCCCGGGCCTTGGAACTACTGGAGAAAAGGGAGAAAAGGGAGAAA 874
Query 220 -------------------------------------------------------------------------- 219
Sbjct 875 AGGGAATCCCTGGTTTGCCAGGACCTAGGGGTCCCATGGGTTCAGAAGGAGTCCAAGGCCCTCCAGGGCAACAG 948
Query 220 -------------------------------------------------------------------------- 219
Sbjct 949 GGCAAGAAAGGGACCCTGGGATTTCCTGGGCTTAATGGATTCCAAGGAATTGAGGGTCAAAAGGGTGACATTGG 1022
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1023 CCTGCCAGGCCCAGATGTTTTCATCGATATAGATGGTGCTGTGATCTCAGGTAATCCTGGAGATCCTGGTGTAC 1096
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1097 CTGGCCTCCCAGGCCTTAAAGGAGATGAAGGCATCCAAGGCCTACGTGGCCCTTCTGGTGTCCCTGGATTGCCA 1170
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1171 GCATTATCAGGTGTCCCAGGAGCCCTAGGGCCTCAGGGATTTCCAGGGCTGAAGGGGGACCAAGGAAACCCAGG 1244
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1245 CCGTACCACAATTGGAGCAGCTGGCCTCCCTGGCAGAGATGGTTTGCCAGGCCCACCAGGTCCACCAGGCCCAC 1318
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1319 CTAGTCCAGAATTTGAGACTGAAACTCTACACAACAAAGAGTCAGGGTTCCCTGGTCTCCGAGGAGAACAAGGT 1392
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1393 CCAAAAGGAAACCTAGGCCTCAAAGGAATAAAAGGAGACTCAGGTTTCTGTGCTTGTGACGGTGGTGTTCCCAA 1466
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1467 CACTGGACCACCCGGGGAACCAGGCCCACCTGGTCCATGGGGTCTCATAGGCCTTCCAGGCCTTAAAGGAGCCA 1540
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1541 GAGGAGATCGAGGCTCTGGGGGTGCACAGGGCCCAGCAGGGGCTCCAGGCTTAGTTGGGCCTCTGGGTCCTTCA 1614
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1615 GGACCCAAAGGAAAGAAGGGGGAACCAATTCTCAGTACAATCCAAGGAATGCCAGGAGATCGGGGTGATTCTGG 1688
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1689 CTCCCAGGGCTTCCGTGGTGTAATAGGAGAACCAGGCAAGGACGGAGTACCAGGTTTACCAGGTCTGCCAGGCC 1762
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1763 TTCCGGGTGATGGTGGACAGGGCTTCCCAGGTGAAAAGGGGTTACCTGGACTTCCTGGTGAAAAAGGCCATCCT 1836
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1837 GGTCCACCTGGCCTCCCAGGAAATGGGTTACCAGGACTTCCTGGACCCCGTGGGCTTCCTGGAGATAAAGGCAA 1910
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1911 GGATGGATTACCGGGACAACAAGGCCTTCCCGGATCTAAGGGAATCACCCTGCCCTGTATTATTCCTGGGTCAT 1984
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1985 ACGGTCCATCAGGATTTCCAGGCACTCCCGGATTCCCAGGCCCTAAAGGGTCTCGAGGCCTCCCTGGGACCCCA 2058
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2059 GGCCAGCCTGGGTCAAGTGGAAGTAAAGGAGAGCCAGGGAGTCCAGGATTGGTTCATCTTCCTGAATTACCAGG 2132
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2133 ATTTCCTGGACCTCGTGGGGAGAAGGGCTTGCCTGGGTTTCCTGGGCTCCCTGGAAAAGATGGCTTGCCTGGGA 2206
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2207 TGATTGGCAGTCCAGGCTTACCTGGTTCCAAGGGAGCCACTGGTGACATCTTTGGTGCTGAAAATGGTGCTCCG 2280
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2281 GGGGAACAAGGCCTACAAGGATTAACAGGGCACAAAGGATTTCTTGGAGACTCTGGCCTTCCAGGACTCAAGGG 2354
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2355 TGTGCACGGGAAGCCTGGCTTACTAGGCCCCAAAGGTGAGCGGGGCAGCCCTGGGACACCAGGACAGGTGGGAC 2428
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2429 AGCCAGGCACCCCAGGATCTAGTGGTCCATATGGCATCAAGGGCAAATCTGGGCTCCCAGGAGCACCAGGCTTC 2502
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2503 CCAGGCATCTCAGGACATCCTGGAAAGAAAGGAACAAGAGGCAAGAAAGGTCCTCCTGGATCAATTGTAAAGAA 2576
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2577 AGGGCTGCCAGGGCTAAAAGGCCTTCCTGGAAATCCAGGCCTAGTAGGACTGAAAGGAAGCCCAGGCTCTCCAG 2650
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2651 GGGTCGCTGGGTTGCCAGCCCTCTCTGGACCCAAGGGAGAGAAGGGGTCTGTTGGATTCGTAGGTTTTCCAGGA 2724
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2725 ATACCAGGTCTGCCTGGTATTCCTGGAACAAGAGGATTAAAAGGAATTCCAGGATCAACTGGAAAAATGGGACC 2798
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2799 ATCTGGACGTGCTGGTACTCCTGGTGAAAAGGGAGACAGAGGCAATCCGGGGCCAGTCGGAATACCTAGTCCAA 2872
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2873 GACGTCCAATGTCAAACCTTTGGCTCAAAGGAGACAAAGGCTCTCAAGGCTCAGCCGGATCCAATGGATTTCCT 2946
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2947 GGGCCAAGAGGTGACAAAGGAGAGGCTGGTCGACCTGGACCACCAGGCCTACCTGGAGCTCCTGGCCTCCCAGG 3020
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3021 CATTATCAAAGGAGTTAGTGGAAAGCCAGGGCCCCCTGGCTTCATGGGAATCCGGGGCTTACCTGGCCTGAAGG 3094
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3095 GGTCCTCTGGGATCACAGGTTTCCCAGGAATGCCAGGAGAAAGTGGTTCACAAGGTATCAGAGGGTCGCCTGGA 3168
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3169 CTCCCAGGAGCATCTGGTCTCCCAGGCCTGAAAGGAGACAACGGCCAGACAGTTGAAATTTCCGGTAGCCCAGG 3242
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3243 ACCCAAGGGACAGCCTGGCGAATCTGGTTTTAAAGGCACAAAAGGAAGAGATGGACTAATAGGCAATATAGGCT 3316
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3317 TCCCTGGAAACAAAGGTGAAGATGGAAAAGTTGGTGTTTCTGGAGATGTTGGCCTTCCTGGAGCTCCAGGATTT 3390
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3391 CCAGGAGTTGCCGGCATGAGAGGAGAACCAGGACTTCCAGGTTCTTCTGGTCACCAAGGGGCAATTGGGCCTCT 3464
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3465 AGGATCCCCCGGATTAATAGGACCCAAAGGACCTAGTATCACCGGTGTGCCTGGGCCTGCTGGTCTCCCTGGAC 3538
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3539 CCAAAGGAGAAAAAGGATATCCAGGAATTGGCATCGGAGCTCCAGGGAAGCCGGGCCTGAGAGGGCAAAAAGGT 3612
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3613 GATCGAGGTTTCCCAGGTCTCCAGGGCCCTGCTGGTCTCCCCGGTGCCCCAGGCATCTCCTTGCCCTCACTCAT 3686
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3687 AGCAGGACAGCCTGGTGACCCCGGGCGACCAGGCCTAGATGGAGAACGAGGCCGCCCAGGCCCCGCTGGACCCC 3760
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3761 CAGGTCCCCCTGGGCCATCCTCGAATCAAGGCGACACCGGAGACCCTGGCTTCCCTGGAATTCCTGGACCTAAA 3834
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3835 GGGCCTAAGGGAGACCAAGGAATTCCAGGTTTTTCTGGCCTCCCTGGAGAGCTAGGACTGAAAGGCATGAGAGG 3908
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3909 TGAGCCTGGCTTCATGGGGACTCCAGGCAAGGTTGGGCCACCTGGAGACCCAGGATTTCCCGGAATGAAGGGGA 3982
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3983 AGGCAGGGCCAAGAGGCTCTTCTGGCCTCCAAGGTGATCCTGGACAAACACCAACTGCAGAAGCTGTCCAGGTT 4056
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4057 CCTCCTGGACCCTTGGGTCTACCAGGGATCGATGGCATCCCTGGCCTCACTGGGGACCCTGGGGCTCAAGGCCC 4130
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4131 TGTAGGCCTACAAGGCTCCAAAGGTTTACCTGGCATCCCCGGTAAAGATGGCCCCAGTGGGCTCCCAGGCCCAC 4204
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4205 CTGGGGCTCTTGGTGATCCTGGTCTGCCTGGACTGCAAGGCCCTCCAGGATTTGAAGGAGCTCCAGGGCAGCAA 4278
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4279 GGCCCCTTCGGGATGCCTGGAATGCCTGGCCAGAGCATGAGAGTGGGCTACACGTTGGTAAAGCACAGCCAGTC 4352
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4353 GGAACAGGTGCCCCCGTGTCCCATCGGGATGAGCCAGCTGTGGGTGGGGTACAGCTTACTGTTTGTGGAGGGGC 4426
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4427 AAGAGAAAGCCCACAACCAGGACCTGGGCTTTGCTGGCTCCTGTCTGCCCCGCTTCAGCACCATGCCCTTCATC 4500
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4501 TACTGCAACATCAACGAGGTGTGCCACTATGCCAGGCGCAATGATAAATCTTACTGGCTCTCCACTACCGCCCC 4574
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4575 TATCCCCATGATGCCCGTCAGCCAGACCCAGATTCCCCAGTACATCAGCCGCTGCTCTGTGTGTGAGGCACCCT 4648
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4649 CGCAAGCCATTGCTGTGCACAGCCAGGACATCACCATCCCGCAGTGCCCCCTGGGCTGGCGCAGCCTCTGGATT 4722
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4723 GGGTACTCTTTCCTCATGCACACTGCCGCTGGTGCCGAGGGTGGAGGCCAGTCCCTGGTCTCACCTGGCTCCTG 4796
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4797 CCTAGAGGACTTTCGGGCCACTCCTTTCATCGAATGCAGTGGTGCCCGAGGCACCTGCCACTACTTTGCAAACA 4870
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4871 AGTACAGTTTCTGGTTGACCACAGTGGAGGAGAGGCAGCAGTTTGGGGAGTTGCCTGTGTCTGAAACGCTGAAA 4944
Query 220 ------------------------------------------------------ 219
Sbjct 4945 GCTGGGCAGCTCCACACTCGAGTCAGTCGCTGCCAGGTGTGTATGAAAAGCCTG 4998
