Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10740
Subject:
NM_001847.4
Aligned Length:
5081
Identities:
195
Gaps:
4870

Alignment

Query    1  ATGCTTATAAACAAGTTGTGGCTGCTCCTGGTTACGTTGTGCCTGACCGAGGAACTGGCAGCAGCGGGAGAGAA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTTATAAACAAGTTGTGGCTGCTCCTGGTTACGTTGTGCCTGACCGAGGAACTGGCAGCAGCGGGAGAGAA  74

Query   75  GTCTTATGGAAAGCCATGTGGGGGCCAGGACTGCAGTGGGAGCTGTCAGTGTTTTCCTGAGAAAGGAGCGAGA-  147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct   75  GTCTTATGGAAAGCCATGTGGGGGCCAGGACTGCAGTGGGAGCTGTCAGTGTTTTCCTGAGAAAGGAGCGAGAG  148

Query  148  CACAACTTG------------------------CAGCTACTGAATGATATGGCTGGCCGGCTCTACCATTTCA-  196
            .||.||.||                        |||.|.||.||.|||     |..|.||||||||...||.| 
Sbjct  149  GACGACCTGGACCAATTGGAATTCAAGGCCCAACAGGTCCTCAAGGAT-----TCACTGGCTCTACTGGTTTAT  217

Query  197  -GTGA---------------GGTTCT-----GCCTAATCT----CTTT--------------------------  219
             |.||               |||| |     ||||  |||    |.||                          
Sbjct  218  CGGGATTGAAAGGAGAAAGGGGTT-TCCCAGGCCT--TCTGGGACCTTATGGACCAAAAGGAGATAAGGGTCCC  288

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  289  ATGGGAGTTCCTGGCTTTCTTGGCATCAATGGGATTCCGGGCCACCCTGGACAACCAGGCCCCAGAGGCCCACC  362

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  363  TGGTCTGGATGGCTGTAATGGAACTCAAGGAGCTGTTGGATTTCCAGGCCCTGATGGCTATCCTGGGCTTCTCG  436

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  437  GACCACCCGGGCTTCCTGGTCAGAAAGGATCAAAAGGTGACCCTGTCCTTGCTCCAGGTAGTTTCAAAGGAATG  510

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  511  AAGGGGGATCCTGGGCTGCCTGGACTGGATGGAATCACTGGCCCACAAGGAGCACCCGGATTTCCTGGAGCTGT  584

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  585  AGGACCTGCAGGACCACCAGGATTACAAGGTCCTCCAGGGCCTCCTGGTCCTCTTGGTCCTGATGGGAATATGG  658

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  659  GGCTAGGTTTTCAAGGAGAGAAAGGAGTCAAGGGGGATGTTGGCCTCCCTGGCCCAGCAGGACCTCCACCATCT  732

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  733  ACTGGAGAGCTGGAATTCATGGGATTCCCCAAAGGGAAGAAAGGATCCAAGGGTGAACCAGGGCCTAAGGGTTT  806

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  807  TCCAGGCATAAGTGGCCCTCCAGGCTTCCCGGGCCTTGGAACTACTGGAGAAAAGGGAGAAAAGGGAGAAAAGG  880

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  881  GAATCCCTGGTTTGCCAGGACCTAGGGGTCCCATGGGTTCAGAAGGAGTCCAAGGCCCTCCAGGGCAACAGGGC  954

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  955  AAGAAAGGGACCCTGGGATTTCCTGGGCTTAATGGATTCCAAGGAATTGAGGGTCAAAAGGGTGACATTGGCCT  1028

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1029  GCCAGGCCCAGATGTTTTCATCGATATAGATGGTGCTGTGATCTCAGGTAATCCTGGAGATCCTGGTGTACCTG  1102

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1103  GCCTCCCAGGCCTTAAAGGAGATGAAGGCATCCAAGGCCTACGTGGCCCTTCTGGTGTCCCTGGATTGCCAGCA  1176

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1177  TTATCAGGTGTCCCAGGAGCCCTAGGGCCTCAGGGATTTCCAGGGCTGAAGGGGGACCAAGGAAACCCAGGCCG  1250

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1251  TACCACAATTGGAGCAGCTGGCCTCCCTGGCAGAGATGGTTTGCCAGGCCCACCAGGTCCACCAGGCCCACCTA  1324

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1325  GTCCAGAATTTGAGACTGAAACTCTACACAACAAAGAGTCAGGGTTCCCTGGTCTCCGAGGAGAACAAGGTCCA  1398

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1399  AAAGGAAACCTAGGCCTCAAAGGAATAAAAGGAGACTCAGGTTTCTGTGCTTGTGACGGTGGTGTTCCCAACAC  1472

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1473  TGGACCACCCGGGGAACCAGGCCCACCTGGTCCATGGGGTCTCATAGGCCTTCCAGGCCTTAAAGGAGCCAGAG  1546

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1547  GAGATCGAGGCTCTGGGGGTGCACAGGGCCCAGCAGGGGCTCCAGGCTTAGTTGGGCCTCTGGGTCCTTCAGGA  1620

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1621  CCCAAAGGAAAGAAGGGGGAACCAATTCTCAGTACAATCCAAGGAATGCCAGGAGATCGGGGTGATTCTGGCTC  1694

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1695  CCAGGGCTTCCGTGGTGTAATAGGAGAACCAGGCAAGGACGGAGTACCAGGTTTACCAGGTCTGCCAGGCCTTC  1768

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1769  CGGGTGATGGTGGACAGGGCTTCCCAGGTGAAAAGGGGTTACCTGGACTTCCTGGTGAAAAAGGCCATCCTGGT  1842

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1843  CCACCTGGCCTCCCAGGAAATGGGTTACCAGGACTTCCTGGACCCCGTGGGCTTCCTGGAGATAAAGGCAAGGA  1916

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1917  TGGATTACCGGGACAACAAGGCCTTCCCGGATCTAAGGGAATCACCCTGCCCTGTATTATTCCTGGGTCATACG  1990

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1991  GTCCATCAGGATTTCCAGGCACTCCCGGATTCCCAGGCCCTAAAGGGTCTCGAGGCCTCCCTGGGACCCCAGGC  2064

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2065  CAGCCTGGGTCAAGTGGAAGTAAAGGAGAGCCAGGGAGTCCAGGATTGGTTCATCTTCCTGAATTACCAGGATT  2138

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2139  TCCTGGACCTCGTGGGGAGAAGGGCTTGCCTGGGTTTCCTGGGCTCCCTGGAAAAGATGGCTTGCCTGGGATGA  2212

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2213  TTGGCAGTCCAGGCTTACCTGGTTCCAAGGGAGCCACTGGTGACATCTTTGGTGCTGAAAATGGTGCTCCGGGG  2286

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2287  GAACAAGGCCTACAAGGATTAACAGGGCACAAAGGATTTCTTGGAGACTCTGGCCTTCCAGGACTCAAGGGTGT  2360

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2361  GCACGGGAAGCCTGGCTTACTAGGCCCCAAAGGTGAGCGGGGCAGCCCTGGGACACCAGGACAGGTGGGACAGC  2434

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2435  CAGGCACCCCAGGATCTAGTGGTCCATATGGCATCAAGGGCAAATCTGGGCTCCCAGGAGCACCAGGCTTCCCA  2508

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2509  GGCATCTCAGGACATCCTGGAAAGAAAGGAACAAGAGGCAAGAAAGGTCCTCCTGGATCAATTGTAAAGAAAGG  2582

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2583  GCTGCCAGGGCTAAAAGGCCTTCCTGGAAATCCAGGCCTAGTAGGACTGAAAGGAAGCCCAGGCTCTCCAGGGG  2656

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2657  TCGCTGGGTTGCCAGCCCTCTCTGGACCCAAGGGAGAGAAGGGGTCTGTTGGATTCGTAGGTTTTCCAGGAATA  2730

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2731  CCAGGTCTGCCTGGTATTCCTGGAACAAGAGGATTAAAAGGAATTCCAGGATCAACTGGAAAAATGGGACCATC  2804

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2805  TGGACGTGCTGGTACTCCTGGTGAAAAGGGAGACAGAGGCAATCCGGGGCCAGTCGGAATACCTAGTCCAAGAC  2878

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2879  GTCCAATGTCAAACCTTTGGCTCAAAGGAGACAAAGGCTCTCAAGGCTCAGCCGGATCCAATGGATTTCCTGGG  2952

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2953  CCAAGAGGTGACAAAGGAGAGGCTGGTCGACCTGGACCACCAGGCCTACCTGGAGCTCCTGGCCTCCCAGGCAT  3026

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3027  TATCAAAGGAGTTAGTGGAAAGCCAGGGCCCCCTGGCTTCATGGGAATCCGGGGCTTACCTGGCCTGAAGGGGT  3100

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3101  CCTCTGGGATCACAGGTTTCCCAGGAATGCCAGGAGAAAGTGGTTCACAAGGTATCAGAGGGTCGCCTGGACTC  3174

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3175  CCAGGAGCATCTGGTCTCCCAGGCCTGAAAGGAGACAACGGCCAGACAGTTGAAATTTCCGGTAGCCCAGGACC  3248

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3249  CAAGGGACAGCCTGGCGAATCTGGTTTTAAAGGCACAAAAGGAAGAGATGGACTAATAGGCAATATAGGCTTCC  3322

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3323  CTGGAAACAAAGGTGAAGATGGAAAAGTTGGTGTTTCTGGAGATGTTGGCCTTCCTGGAGCTCCAGGATTTCCA  3396

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3397  GGAGTTGCCGGCATGAGAGGAGAACCAGGACTTCCAGGTTCTTCTGGTCACCAAGGGGCAATTGGGCCTCTAGG  3470

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3471  ATCCCCCGGATTAATAGGACCCAAAGGCTTCCCTGGATTTCCTGGTTTACATGGACTGAATGGGCTTCCGGGCA  3544

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3545  CCAAGGGTACCCATGGCACTCCAGGACCTAGTATCACCGGTGTGCCTGGGCCTGCTGGTCTCCCTGGACCCAAA  3618

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3619  GGAGAAAAAGGATATCCAGGAATTGGCATCGGAGCTCCAGGGAAGCCGGGCCTGAGAGGGCAAAAAGGTGATCG  3692

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3693  AGGTTTCCCAGGTCTCCAGGGCCCTGCTGGTCTCCCCGGTGCCCCAGGCATCTCCTTGCCCTCACTCATAGCAG  3766

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3767  GACAGCCTGGTGACCCCGGGCGACCAGGCCTAGATGGAGAACGAGGCCGCCCAGGCCCCGCTGGACCCCCAGGT  3840

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3841  CCCCCTGGGCCATCCTCGAATCAAGGCGACACCGGAGACCCTGGCTTCCCTGGAATTCCTGGACCTAAAGGGCC  3914

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3915  TAAGGGAGACCAAGGAATTCCAGGTTTTTCTGGCCTCCCTGGAGAGCTAGGACTGAAAGGCATGAGAGGTGAGC  3988

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3989  CTGGCTTCATGGGGACTCCAGGCAAGGTTGGGCCACCTGGAGACCCAGGATTTCCCGGAATGAAGGGGAAGGCA  4062

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4063  GGGCCAAGAGGCTCTTCTGGCCTCCAAGGTGATCCTGGACAAACACCAACTGCAGAAGCTGTCCAGGTTCCTCC  4136

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4137  TGGACCCTTGGGTCTACCAGGGATCGATGGCATCCCTGGCCTCACTGGGGACCCTGGGGCTCAAGGCCCTGTAG  4210

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4211  GCCTACAAGGCTCCAAAGGTTTACCTGGCATCCCCGGTAAAGATGGCCCCAGTGGGCTCCCAGGCCCACCTGGG  4284

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4285  GCTCTTGGTGATCCTGGTCTGCCTGGACTGCAAGGCCCTCCAGGATTTGAAGGAGCTCCAGGGCAGCAAGGCCC  4358

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4359  CTTCGGGATGCCTGGAATGCCTGGCCAGAGCATGAGAGTGGGCTACACGTTGGTAAAGCACAGCCAGTCGGAAC  4432

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4433  AGGTGCCCCCGTGTCCCATCGGGATGAGCCAGCTGTGGGTGGGGTACAGCTTACTGTTTGTGGAGGGGCAAGAG  4506

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4507  AAAGCCCACAACCAGGACCTGGGCTTTGCTGGCTCCTGTCTGCCCCGCTTCAGCACCATGCCCTTCATCTACTG  4580

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4581  CAACATCAACGAGGTGTGCCACTATGCCAGGCGCAATGATAAATCTTACTGGCTCTCCACTACCGCCCCTATCC  4654

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4655  CCATGATGCCCGTCAGCCAGACCCAGATTCCCCAGTACATCAGCCGCTGCTCTGTGTGTGAGGCACCCTCGCAA  4728

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4729  GCCATTGCTGTGCACAGCCAGGACATCACCATCCCGCAGTGCCCCCTGGGCTGGCGCAGCCTCTGGATTGGGTA  4802

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4803  CTCTTTCCTCATGCACACTGCCGCTGGTGCCGAGGGTGGAGGCCAGTCCCTGGTCTCACCTGGCTCCTGCCTAG  4876

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4877  AGGACTTTCGGGCCACTCCTTTCATCGAATGCAGTGGTGCCCGAGGCACCTGCCACTACTTTGCAAACAAGTAC  4950

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4951  AGTTTCTGGTTGACCACAGTGGAGGAGAGGCAGCAGTTTGGGGAGTTGCCTGTGTCTGAAACGCTGAAAGCTGG  5024

Query  220  -------------------------------------------------  219
                                                             
Sbjct 5025  GCAGCTCCACACTCGAGTCAGTCGCTGCCAGGTGTGTATGAAAAGCCTG  5073

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