Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10771
- Subject:
- NM_001135040.2
- Aligned Length:
- 3759
- Identities:
- 593
- Gaps:
- 3165
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCACAGAGCAAGAGGCACGTGTACAGCCGGACGCCCAGCGGCAGCAGGATGAGTGCGGAGGCAAGCGCCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCTCTGCGGGTGGGCTCCCGTGTAGAGGTGATTGGAAAAGGCCACCGAGGCACTGTGGCCTATGTTGGAGCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACTGTTTGCCACTGGCAAATGGGTAGGCGTGATTCTGGATGAAGCAAAGGGCAAAAATGATGGAACTGTTCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCAGGAAGTACTTCACTTGTGATGAAGGGCATGGCATCTTTGTGCGCCAGTCCCAGATCCAGGTATTTGAAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGAGCAGATACTACTTCCCCAGAGACACCTGATTCTTCTGCTTCAAAAGTCCTCAAAAGAGAGGGAACTGATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAACTGCAAAGACTAGCAAACTGCCCACGCGCCCAGCCAGTACTGGGGTGGCTGGGGCCAGTAGCTCCCTGGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCTCTGGCTCAGCGTCAGCAGGTGAGCTGAGCAGCAGTGAGCCCAGCACCCCGGCTCAGACTCCGCTGGCAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCCATCATCCCCACGCCGGTCCTCACCTCTCCTGGAGCAGTCCCCCCGCTTCCTTCCCCATCCAAGGAGGAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGGGACTAAGGGCTCAGGTGCGGGACCTGGAGGAGAAACTAGAGACCCTGAGACTGAAACGGGCAGAAGACAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCAAAGCTAAAAGAGCTGGAGAAACACAAAATCCAGCTGGAGCAGGTGCAGGAATGGAAGAGCAAAATGCAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCAGCAGGCCGACCTGCAGCGGCGCCTCAAGGAGGCGAGAAAGGAAGCCAAGGAGGCGCTGGAGGCAAAGGAAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTATATGGAGGAGATGGCTGATACTGCTGATGCCATTGAGATGGCCACTTTGGACAAGGAGATGGCTGAAGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGGGCTGAGTCCCTGCAGCAGGAGGTGGAGGCACTGAAGGAGCGGGTGGACGAGCTCACTACTGACTTAGAGAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCTCAAGGCTGAGATTGAAGAGAAGGGCTCAGATGGCGCTGCATCCAGTTATCAGCTCAAGCAGCTTGAGGAGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGAATGCCCGCCTGAAGGATGCCCTGGTGAGGATGCGGGATCTTTCTTCCTCAGAGAAGCAGGAGCATGTGAAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTCCAGAAGCTCATGGAAAAGAAGAACCAAGAGCTGGAAGTTGTGAGGCAACAGCGGGAGCGTCTGCAGGAGGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCTAAGCCAGGCAGAGAGCACCATTGATGAGCTCAAGGAGCAGGTGGATGCTGCTCTGGGTGCTGAGGAGATGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGAGATGCTGACAGATCGGAACCTGAATCTGGAAGAGAAAGTGCGCGAGTTGAGGGAGACTGTGGGAGACTTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAGCGATGAATGAGATGAACGATGAGCTGCAGGAGAATGCACGTGAGACAGAACTGGAGCTGCGGGAGCAGCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGACATGGCAGGCGCGCGGGTTCGTGAGGCCCAGAAGCGTGTGGAGGCAGCCCAGGAGACGGTTGCAGACTACC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGCAGACCATCAAGAAGTACCGCCAGCTGACCGCCCATCTACAGGATGTGAATCGGGAACTGACAAACCAGCAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAAGCATCTGTGGAGAGGCAACAGCAGCCACCTCCAGAGACCTTTGACTTCAAAATCAAGTTTGCTGAGACTAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGCCCATGCCAAGGCAATTGAGATGGAATTGAGGCAGATGGAGGTGGCCCAGGCCAATCGACACATGTCCCTGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGACAGCCTTCATGCCTGACAGCTTCCTTCGGCCAGGTGGGGACCATGACTGCGTTCTGGTGCTGTTGCTCATG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCTCGTCTCATTTGCAAGGCAGAGCTGATCCGGAAGCAGGCCCAGGAGAAGTTTGAACTAAGTGAGAACTGTTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGAGCGGCCTGGGCTGCGAGGAGCTGCTGGGGAGCAACTCAGCTTTGCTGCTGGACTGGTGTACTCGCTGAGCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGCTGCAGGCCACGCTACACCGCTATGAGCATGCCCTCTCTCAGTGCAGTGTGGATGTGTATAAGAAAGTGGGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGCCTGTACCCTGAGATGAGTGCCCATGAGCGCTCCTTGGATTTCCTCATTGAACTGCTGCACAAGGATCAGCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGATGAGACTGTCAATGTGGAGCCTCTCACCAAGGCCATCAAGTACTATCAGCATCTGTACAGCATCCACCTTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCGAACAGCCTGAGGACTGTACTATGCAGCTGGCTGACCACATTAAGTTCACGCAGAGTGCTCTGGACTGCATG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGTGTGGAGGTAGGACGGCTGCGTGCCTTCTTGCAGGGTGGGCAGGAGGCTACAGATATTGCCCTCCTGCTCCG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGATCTGGAAACTTCATGCAGTGACATCCGCCAGTTCTGCAAGAAGATCCGAAGGCGAATGCCAGGGACAGATG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTCCTGGGATCCCAGCTGCACTGGCCTTTGGACCACAGGTATCTGACACGCTCCTAGACTGCAGGAAACACTTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACGTGGGTCGTGGCTGTGCTGCAGGAGGTGGCAGCTGCTGCTGCCCAGCTCATTGCCCCACTGGCAGAGAATGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGGGCTACTTGTGGCTGCTCTGGAGGAACTGGCTTTCAAAGCAAGCGAGCAGATCTATGGGACCCCCTCCAGCA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GCCCCTATGAGTGTCTGCGCCAGTCATGCAACATCCTCATCAGTACCATGAACAAGCTGGCCACAGCCATGCAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAGGGGGAGTATGATGCAGAGCGGCCCCCCAGCAAGCCTCCACCGGTTGAACTGCGGGCTGCTGCCCTTCGTGC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGAGATCACAGATGCTGAAGGCCTGGGTTTGAAGCTCGAAGATCGAGAGACAGTTATTAAGGAGTTGAAGAAGT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CACTCAAGATTAAGGGAGAGGAGCTAAGTGAGGCCAATGTGCGGCTGAGCCTCCTGGAGAAGAAGTTGGACAGT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCTGCCAAGGATGCAGATGAGCGCATCGAGAAAGTCCAGACTCGGCTGGAGGAGACCCAGGCACTGCTGCGAAA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GAAGGAGAAAGAGTTTGAGGAGACAATGGATGCACTCCAGGCTGACATCGACCAGCTGGAGGCAGAGAAGGCAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AACTAAAGCAGCGTCTGAACAGCCAGTCCAAACGCACGATTGAGGGACTCCGGGGCCCTCCTCCTTCAGGCATT 3108
Query 1 ---------------------------------------------------------ATGCCAGGCCCAGGGCT 17
.||||||||||||||||
Sbjct 3109 GCTACTCTGGTCTCTGGCATTGCTGGTGGAGCCATCCCTGGGCAGGCTCCAGGGTCTGTGCCAGGCCCAGGGCT 3182
Query 18 GGTGAAGGACTCACCACTGCTGCTTCAGCAGATCTCTGCCATGAGGCTGCACATCTCCCAGCTCCAGCATGAGA 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 GGTGAAGGACTCACCACTGCTGCTTCAGCAGATCTCTGCCATGAGGCTGCACATCTCCCAGCTCCAGCATGAGA 3256
Query 92 ACAGCATCCTCAAGGGAGCCCAGATGAAGGCATCCTTGGCATCCCTGCCCCCTCTGCATGTTGCAAAGCTATCC 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 ACAGCATCCTCAAGGGAGCCCAGATGAAGGCATCCTTGGCATCCCTGCCCCCTCTGCATGTTGCAAAGCTATCC 3330
Query 166 CATGAGGGCCCTGGCAGTGAGTTACCAGCTGGAGCGCTGTATCGTAAGACCAGCCAGCTGCTGGAGACATTGAA 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 CATGAGGGCCCTGGCAGTGAGTTACCAGCTGGAGCGCTGTATCGTAAGACCAGCCAGCTGCTGGAGACATTGAA 3404
Query 240 TCAATTGAGCACACACACGCACGTAGTAGACATCACTCGCACCAGCCCTGCTGCCAAGAGCCCGTCGGCCCAAC 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 TCAATTGAGCACACACACGCACGTAGTAGACATCACTCGCACCAGCCCTGCTGCCAAGAGCCCGTCGGCCCAAC 3478
Query 314 TTATGGAGCAAGTGGCTCAGCTTAAGTCCCTGAGTGACACCGTCGAGAAGCTCAAGGATGAGGTCCTCAAGGAG 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 TTATGGAGCAAGTGGCTCAGCTTAAGTCCCTGAGTGACACCGTCGAGAAGCTCAAGGATGAGGTCCTCAAGGAG 3552
Query 388 ACAGTATCTCAGCGCCCTGGAGCCACAGTACCCACTGACTTTGCCACCTTCCCTTCATCAGCCTTCCTCAGGGC 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 ACAGTATCTCAGCGCCCTGGAGCCACAGTACCCACTGACTTTGCCACCTTCCCTTCATCAGCCTTCCTCAGGGC 3626
Query 462 CAAGGAGGAGCAGCAGGATGACACAGTCTACATGGGCAAAGTGACCTTCTCATGTGCGGCTGGTTTTGGACAGC 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 CAAGGAGGAGCAGCAGGATGACACAGTCTACATGGGCAAAGTGACCTTCTCATGTGCGGCTGGTTTTGGACAGC 3700
Query 536 GACACCGGCTGGTGCTGACCCAGGAGCAGCTGCACCAGCTTCACAGTCGCCTCATCTCC 594
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 GACACCGGCTGGTGCTGACCCAGGAGCAGCTGCACCAGCTTCACAGTCGCCTCATCTCC 3759
