Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10771
- Subject:
- NM_001135041.2
- Aligned Length:
- 3417
- Identities:
- 593
- Gaps:
- 2823
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATGAGACAGGCACCGACAGCCCGAAAGACCACAACTCGGCGACCCAAGCCCACGCGCCCAGCCAGTACTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTGGCTGGGGCCAGTAGCTCCCTGGGCCCCTCTGGCTCAGCGTCAGCAGGTGAGCTGAGCAGCAGTGAGCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCACCCCGGCTCAGACTCCGCTGGCAGCACCCATCATCCCCACGCCGGTCCTCACCTCTCCTGGAGCAGTCCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGCTTCCTTCCCCATCCAAGGAGGAGGAGGGACTAAGGGCTCAGGTGCGGGACCTGGAGGAGAAACTAGAGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTGAGACTGAAACGGGCAGAAGACAAAGCAAAGCTAAAAGAGCTGGAGAAACACAAAATCCAGCTGGAGCAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCAGGAATGGAAGAGCAAAATGCAGGAGCAGCAGGCCGACCTGCAGCGGCGCCTCAAGGAGGCGAGAAAGGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCAAGGAGGCGCTGGAGGCAAAGGAACGCTATATGGAGGAGATGGCTGATACTGCTGATGCCATTGAGATGGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACTTTGGACAAGGAGATGGCTGAAGAGCGGGCTGAGTCCCTGCAGCAGGAGGTGGAGGCACTGAAGGAGCGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGACGAGCTCACTACTGACTTAGAGATCCTCAAGGCTGAGATTGAAGAGAAGGGCTCAGATGGCGCTGCATCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGTTATCAGCTCAAGCAGCTTGAGGAGCAGAATGCCCGCCTGAAGGATGCCCTGGTGAGGATGCGGGATCTTTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTCCTCAGAGAAGCAGGAGCATGTGAAGCTCCAGAAGCTCATGGAAAAGAAGAACCAAGAGCTGGAAGTTGTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCAACAGCGGGAGCGTCTGCAGGAGGAGCTAAGCCAGGCAGAGAGCACCATTGATGAGCTCAAGGAGCAGGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GATGCTGCTCTGGGTGCTGAGGAGATGGTGGAGATGCTGACAGATCGGAACCTGAATCTGGAAGAGAAAGTGCG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGAGTTGAGGGAGACTGTGGGAGACTTGGAAGCGATGAATGAGATGAACGATGAGCTGCAGGAGAATGCACGTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGACAGAACTGGAGCTGCGGGAGCAGCTGGACATGGCAGGCGCGCGGGTTCGTGAGGCCCAGAAGCGTGTGGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCAGCCCAGGAGACGGTTGCAGACTACCAGCAGACCATCAAGAAGTACCGCCAGCTGACCGCCCATCTACAGGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTGAATCGGGAACTGACAAACCAGCAGGAAGCATCTGTGGAGAGGCAACAGCAGCCACCTCCAGAGACCTTTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACTTCAAAATCAAGTTTGCTGAGACTAAGGCCCATGCCAAGGCAATTGAGATGGAATTGAGGCAGATGGAGGTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCCCAGGCCAATCGACACATGTCCCTGCTGACAGCCTTCATGCCTGACAGCTTCCTTCGGCCAGGTGGGGACCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGACTGCGTTCTGGTGCTGTTGCTCATGCCTCGTCTCATTTGCAAGGCAGAGCTGATCCGGAAGCAGGCCCAGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGAAGTTTGAACTAAGTGAGAACTGTTCAGAGCGGCCTGGGCTGCGAGGAGCTGCTGGGGAGCAACTCAGCTTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCTGCTGGACTGGTGTACTCGCTGAGCCTGCTGCAGGCCACGCTACACCGCTATGAGCATGCCCTCTCTCAGTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAGTGTGGATGTGTATAAGAAAGTGGGCAGCCTGTACCCTGAGATGAGTGCCCATGAGCGCTCCTTGGATTTCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCATTGAACTGCTGCACAAGGATCAGCTGGATGAGACTGTCAATGTGGAGCCTCTCACCAAGGCCATCAAGTAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TATCAGCATCTGTACAGCATCCACCTTGCCGAACAGCCTGAGGACTGTACTATGCAGCTGGCTGACCACATTAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTTCACGCAGAGTGCTCTGGACTGCATGAGTGTGGAGGTAGGACGGCTGCGTGCCTTCTTGCAGGGTGGGCAGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGGCTACAGATATTGCCCTCCTGCTCCGGGATCTGGAAACTTCATGCAGTGACATCCGCCAGTTCTGCAAGAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATCCGAAGGCGAATGCCAGGGACAGATGCTCCTGGGATCCCAGCTGCACTGGCCTTTGGACCACAGGTATCTGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CACGCTCCTAGACTGCAGGAAACACTTGACGTGGGTCGTGGCTGTGCTGCAGGAGGTGGCAGCTGCTGCTGCCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGCTCATTGCCCCACTGGCAGAGAATGAGGGGCTACTTGTGGCTGCTCTGGAGGAACTGGCTTTCAAAGCAAGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAGCAGATCTATGGGACCCCCTCCAGCAGCCCCTATGAGTGTCTGCGCCAGTCATGCAACATCCTCATCAGTAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CATGAACAAGCTGGCCACAGCCATGCAGGAGGGGGAGTATGATGCAGAGCGGCCCCCCAGCAAGCCTCCACCGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTGAACTGCGGGCTGCTGCCCTTCGTGCAGAGATCACAGATGCTGAAGGCCTGGGTTTGAAGCTCGAAGATCGA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GAGACAGTTATTAAGGAGTTGAAGAAGTCACTCAAGATTAAGGGAGAGGAGCTAAGTGAGGCCAATGTGCGGCT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GAGCCTCCTGGAGAAGAAGTTGGACAGTGCTGCCAAGGATGCAGATGAGCGCATCGAGAAAGTCCAGACTCGGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGGAGGAGACCCAGGCACTGCTGCGAAAGAAGGAGAAAGAGTTTGAGGAGACAATGGATGCACTCCAGGCTGAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATCGACCAGCTGGAGGCAGAGAAGGCAGAACTAAAGCAGCGTCTGAACAGCCAGTCCAAACGCACGATTGAGGG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ACTCCGGGGCCCTCCTCCTTCAGGCATTGCTACTCTGGTCTCTGGCATTGCTGGTGGAGCCATCCCTGGGCAGG 2812
Query 1 -----------ATGCCAGGCCCAGGGCTGGTGAAGGACTCACCACTGCTGCTTCAGCAGATCTCTGCCATGAGG 63
.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 CTCCAGGGTCTGTGCCAGGCCCAGGGCTGGTGAAGGACTCACCACTGCTGCTTCAGCAGATCTCTGCCATGAGG 2886
Query 64 CTGCACATCTCCCAGCTCCAGCATGAGAACAGCATCCTCAAGGGAGCCCAGATGAAGGCATCCTTGGCATCCCT 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 CTGCACATCTCCCAGCTCCAGCATGAGAACAGCATCCTCAAGGGAGCCCAGATGAAGGCATCCTTGGCATCCCT 2960
Query 138 GCCCCCTCTGCATGTTGCAAAGCTATCCCATGAGGGCCCTGGCAGTGAGTTACCAGCTGGAGCGCTGTATCGTA 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 GCCCCCTCTGCATGTTGCAAAGCTATCCCATGAGGGCCCTGGCAGTGAGTTACCAGCTGGAGCGCTGTATCGTA 3034
Query 212 AGACCAGCCAGCTGCTGGAGACATTGAATCAATTGAGCACACACACGCACGTAGTAGACATCACTCGCACCAGC 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 AGACCAGCCAGCTGCTGGAGACATTGAATCAATTGAGCACACACACGCACGTAGTAGACATCACTCGCACCAGC 3108
Query 286 CCTGCTGCCAAGAGCCCGTCGGCCCAACTTATGGAGCAAGTGGCTCAGCTTAAGTCCCTGAGTGACACCGTCGA 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 CCTGCTGCCAAGAGCCCGTCGGCCCAACTTATGGAGCAAGTGGCTCAGCTTAAGTCCCTGAGTGACACCGTCGA 3182
Query 360 GAAGCTCAAGGATGAGGTCCTCAAGGAGACAGTATCTCAGCGCCCTGGAGCCACAGTACCCACTGACTTTGCCA 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 GAAGCTCAAGGATGAGGTCCTCAAGGAGACAGTATCTCAGCGCCCTGGAGCCACAGTACCCACTGACTTTGCCA 3256
Query 434 CCTTCCCTTCATCAGCCTTCCTCAGGGCCAAGGAGGAGCAGCAGGATGACACAGTCTACATGGGCAAAGTGACC 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 CCTTCCCTTCATCAGCCTTCCTCAGGGCCAAGGAGGAGCAGCAGGATGACACAGTCTACATGGGCAAAGTGACC 3330
Query 508 TTCTCATGTGCGGCTGGTTTTGGACAGCGACACCGGCTGGTGCTGACCCAGGAGCAGCTGCACCAGCTTCACAG 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 TTCTCATGTGCGGCTGGTTTTGGACAGCGACACCGGCTGGTGCTGACCCAGGAGCAGCTGCACCAGCTTCACAG 3404
Query 582 TCGCCTCATCTCC 594
|||||||||||||
Sbjct 3405 TCGCCTCATCTCC 3417
