Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10771
- Subject:
- NM_001190836.1
- Aligned Length:
- 3708
- Identities:
- 593
- Gaps:
- 3114
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGTGCGGAGGCAAGCGCCCGGCCTCTGCGGGTGGGCTCCCGTGTAGAGGTGATTGGAAAAGGCCACCGAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CACTGTGGCCTATGTTGGAGCCACACTGTTTGCCACTGGCAAATGGGTAGGCGTGATTCTGGATGAAGCAAAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAAAAATGATGGAACTGTTCAAGGCAGGAAGTACTTCACTTGTGATGAAGGGCATGGCATCTTTGTGCGCCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCCAGATCCAGGTATTTGAAGATGGAGCAGATACTACTTCCCCAGAGACACCTGATTCTTCTGCTTCAAAAGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTCAAAAGAGAGGGAACTGATACAACTGCAAAGACTAGCAAACTGCCCACGCGCCCAGCCAGTACTGGGGTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGGGGCCAGTAGCTCCCTGGGCCCCTCTGGCTCAGCGTCAGCAGGTGAGCTGAGCAGCAGTGAGCCCAGCACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGGCTCAGACTCCGCTGGCAGCACCCATCATCCCCACGCCGGTCCTCACCTCTCCTGGAGCAGTCCCCCCGCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCCTTCCCCATCCAAGGAGGAGGAGGGACTAAGGGCTCAGGTGCGGGACCTGGAGGAGAAACTAGAGACCCTGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GACTGAAACGGGCAGAAGACAAAGCAAAGCTAAAAGAGCTGGAGAAACACAAAATCCAGCTGGAGCAGGTGCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAATGGAAGAGCAAAATGCAGGAGCAGCAGGCCGACCTGCAGCGGCGCCTCAAGGAGGCGAGAAAGGAAGCCAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGAGGCGCTGGAGGCAAAGGAACGCTATATGGAGGAGATGGCTGATACTGCTGATGCCATTGAGATGGCCACTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGACAAGGAGATGGCTGAAGAGCGGGCTGAGTCCCTGCAGCAGGAGGTGGAGGCACTGAAGGAGCGGGTGGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAGCTCACTACTGACTTAGAGATCCTCAAGGCTGAGATTGAAGAGAAGGGCTCAGATGGCGCTGCATCCAGTTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCAGCTCAAGCAGCTTGAGGAGCAGAATGCCCGCCTGAAGGATGCCCTGGTGAGGATGCGGGATCTTTCTTCCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGAGAAGCAGGAGCATGTGAAGCTCCAGAAGCTCATGGAAAAGAAGAACCAAGAGCTGGAAGTTGTGAGGCAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGCGGGAGCGTCTGCAGGAGGAGCTAAGCCAGGCAGAGAGCACCATTGATGAGCTCAAGGAGCAGGTGGATGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCTCTGGGTGCTGAGGAGATGGTGGAGATGCTGACAGATCGGAACCTGAATCTGGAAGAGAAAGTGCGCGAGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGAGGGAGACTGTGGGAGACTTGGAAGCGATGAATGAGATGAACGATGAGCTGCAGGAGAATGCACGTGAGACA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAACTGGAGCTGCGGGAGCAGCTGGACATGGCAGGCGCGCGGGTTCGTGAGGCCCAGAAGCGTGTGGAGGCAGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCAGGAGACGGTTGCAGACTACCAGCAGACCATCAAGAAGTACCGCCAGCTGACCGCCCATCTACAGGATGTGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATCGGGAACTGACAAACCAGCAGGAAGCATCTGTGGAGAGGCAACAGCAGCCACCTCCAGAGACCTTTGACTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAAATCAAGTTTGCTGAGACTAAGGCCCATGCCAAGGCAATTGAGATGGAATTGAGGCAGATGGAGGTGGCCCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGCCAATCGACACATGTCCCTGCTGACAGCCTTCATGCCTGACAGCTTCCTTCGGCCAGGTGGGGACCATGACT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCGTTCTGGTGCTGTTGCTCATGCCTCGTCTCATTTGCAAGGCAGAGCTGATCCGGAAGCAGGCCCAGGAGAAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTGAACTAAGTGAGAACTGTTCAGAGCGGCCTGGGCTGCGAGGAGCTGCTGGGGAGCAACTCAGCTTTGCTGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGACTGGTGTACTCGCTGAGCCTGCTGCAGGCCACGCTACACCGCTATGAGCATGCCCTCTCTCAGTGCAGTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGGATGTGTATAAGAAAGTGGGCAGCCTGTACCCTGAGATGAGTGCCCATGAGCGCTCCTTGGATTTCCTCATT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAACTGCTGCACAAGGATCAGCTGGATGAGACTGTCAATGTGGAGCCTCTCACCAAGGCCATCAAGTACTATCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCATCTGTACAGCATCCACCTTGCCGAACAGCCTGAGGACTGTACTATGCAGCTGGCTGACCACATTAAGTTCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CGCAGAGTGCTCTGGACTGCATGAGTGTGGAGGTAGGACGGCTGCGTGCCTTCTTGCAGGGTGGGCAGGAGGCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACAGATATTGCCCTCCTGCTCCGGGATCTGGAAACTTCATGCAGTGACATCCGCCAGTTCTGCAAGAAGATCCG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AAGGCGAATGCCAGGGACAGATGCTCCTGGGATCCCAGCTGCACTGGCCTTTGGACCACAGGTATCTGACACGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCCTAGACTGCAGGAAACACTTGACGTGGGTCGTGGCTGTGCTGCAGGAGGTGGCAGCTGCTGCTGCCCAGCTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATTGCCCCACTGGCAGAGAATGAGGGGCTACTTGTGGCTGCTCTGGAGGAACTGGCTTTCAAAGCAAGCGAGCA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GATCTATGGGACCCCCTCCAGCAGCCCCTATGAGTGTCTGCGCCAGTCATGCAACATCCTCATCAGTACCATGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACAAGCTGGCCACAGCCATGCAGGAGGGGGAGTATGATGCAGAGCGGCCCCCCAGCAAGCCTCCACCGGTTGAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTGCGGGCTGCTGCCCTTCGTGCAGAGATCACAGATGCTGAAGGCCTGGGTTTGAAGCTCGAAGATCGAGAGAC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGTTATTAAGGAGTTGAAGAAGTCACTCAAGATTAAGGGAGAGGAGCTAAGTGAGGCCAATGTGCGGCTGAGCC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCCTGGAGAAGAAGTTGGACAGTGCTGCCAAGGATGCAGATGAGCGCATCGAGAAAGTCCAGACTCGGCTGGAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GAGACCCAGGCACTGCTGCGAAAGAAGGAGAAAGAGTTTGAGGAGACAATGGATGCACTCCAGGCTGACATCGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCAGCTGGAGGCAGAGAAGGCAGAACTAAAGCAGCGTCTGAACAGCCAGTCCAAACGCACGATTGAGGGACTCC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GGGGCCCTCCTCCTTCAGGCATTGCTACTCTGGTCTCTGGCATTGCTGGTGGAGCCATCCCTGGGCAGGCTCCA 3108
Query 1 ------ATGCCAGGCCCAGGGCTGGTGAAGGACTCACCACTGCTGCTTCAGCAGATCTCTGCCATGAGGCTGCA 68
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 GGGTCTGTGCCAGGCCCAGGGCTGGTGAAGGACTCACCACTGCTGCTTCAGCAGATCTCTGCCATGAGGCTGCA 3182
Query 69 CATCTCCCAGCTCCAGCATGAGAACAGCATCCTCAAGGGAGCCCAGATGAAGGCATCCTTGGCATCCCTGCCCC 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 CATCTCCCAGCTCCAGCATGAGAACAGCATCCTCAAGGGAGCCCAGATGAAGGCATCCTTGGCATCCCTGCCCC 3256
Query 143 CTCTGCATGTTGCAAAGCTATCCCATGAGGGCCCTGGCAGTGAGTTACCAGCTGGAGCGCTGTATCGTAAGACC 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 CTCTGCATGTTGCAAAGCTATCCCATGAGGGCCCTGGCAGTGAGTTACCAGCTGGAGCGCTGTATCGTAAGACC 3330
Query 217 AGCCAGCTGCTGGAGACATTGAATCAATTGAGCACACACACGCACGTAGTAGACATCACTCGCACCAGCCCTGC 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 AGCCAGCTGCTGGAGACATTGAATCAATTGAGCACACACACGCACGTAGTAGACATCACTCGCACCAGCCCTGC 3404
Query 291 TGCCAAGAGCCCGTCGGCCCAACTTATGGAGCAAGTGGCTCAGCTTAAGTCCCTGAGTGACACCGTCGAGAAGC 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 TGCCAAGAGCCCGTCGGCCCAACTTATGGAGCAAGTGGCTCAGCTTAAGTCCCTGAGTGACACCGTCGAGAAGC 3478
Query 365 TCAAGGATGAGGTCCTCAAGGAGACAGTATCTCAGCGCCCTGGAGCCACAGTACCCACTGACTTTGCCACCTTC 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 TCAAGGATGAGGTCCTCAAGGAGACAGTATCTCAGCGCCCTGGAGCCACAGTACCCACTGACTTTGCCACCTTC 3552
Query 439 CCTTCATCAGCCTTCCTCAGGGCCAAGGAGGAGCAGCAGGATGACACAGTCTACATGGGCAAAGTGACCTTCTC 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 CCTTCATCAGCCTTCCTCAGGGCCAAGGAGGAGCAGCAGGATGACACAGTCTACATGGGCAAAGTGACCTTCTC 3626
Query 513 ATGTGCGGCTGGTTTTGGACAGCGACACCGGCTGGTGCTGACCCAGGAGCAGCTGCACCAGCTTCACAGTCGCC 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 ATGTGCGGCTGGTTTTGGACAGCGACACCGGCTGGTGCTGACCCAGGAGCAGCTGCACCAGCTTCACAGTCGCC 3700
Query 587 TCATCTCC 594
||||||||
Sbjct 3701 TCATCTCC 3708
