Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10805
- Subject:
- XR_377419.3
- Aligned Length:
- 4114
- Identities:
- 923
- Gaps:
- 3070
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CACCTCAGTTCAATCCAGAGTAGAAGCCCCACTGGTTTAGTTCCTAGAGTTAAAGAAGAGAAAGGGAGGAGCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TAGGCGCAGCGCCTGGGCTTCAGCCTGGCCATCAGCTGCCAGCCAGTAGCGCTTTGCTCCGCTGATGCTCGGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGAGCTACAGGGTTTTAAACACGCCTCGCAGCGGCGCCCACTGGCCGCCTCCTCCCGGACCCTAACTCGTGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCCTCCTGCCCACGTCCCCTCCGCCCGCCAGGACCTGCGGGAGGAGGCCGACCCTCCTCGGCACACGGGCGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCAAGGCGCGCCCAGCGTCTCCACTGCACGCCCCGCTGGGGATCCGGCGCCGCGCACTTGGGTCCTAGGCCCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGGGCGGGCTCGGCTCCCGGAAGAGGAGAGCGAGAGCGGCTGAAGGGGCTGGAGAGGGGCGGGCCAGGCTGGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGAGACGAGAGGGGGCGGGCCCGGCTGCGTTCGCCCAGCTAGCGCTGGGGAGCAGCGGGCGTCCGAACCCGAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCACAGCTCAGCGACTCCGATCGTGACACCGGCCCCCGCACGATTCCCCAGGGCCCCGCCTAGGGAGCAGTCCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCTTGCAGCCTTGGGTCCTCTCCCAGAATCCCAGAGACTCTAAGCTGCGAGCAGACGCGGGCCCCTGGGAAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGGTCCCCAGACCAGAGAGGACACGCGCGACGCTAGGAAAGATCTGCGAGGTGCAGATCCACCGCGGGGGCCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGGGGGGCGCAGACCTGCAGAGCTGGAGGCCGGCGGGAAGGTTGGCTGCTGGAGGAACGGTGCAGAGTAAATGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGAGAGCAAACTGGAATAACTCCTACCAGACAAGAAGGGAAGCAAGCCTGGCTGTAGACACCAGGTCTTCTGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGCCATAGCAGTGCCTCAGAACAGGGCAGTGGCCGAGGCAATGGTGGGAGTGCCGAAGAGACCGCATGGCTACT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGGGCACGACTGGCTCAGGGAGCAGAGTGGTGGCGGGCATGGTGTGCAGTCTGTGGCTCCTGGTTCTAGGGTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATCAGTTCTAGCTCTGGAAGAGGTGCTGCTGGATACCACAGGAGAGACCTCTGAGATTGGCTGGCTCACCTACC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CGCCAGGTGGGTGGGATGAGGTGAGTGTTCTAGATGACCAGCGCCGTCTGACTCGGACCTTCGAAGCATGCCAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTTGCAGGGCTCCCTCCTGGTTCTGGCCAGGACAATTGGCTGCAGACACACTTTGTGGAACGGCGAGGGGCCCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAGGGCACACATCCGCCTTCACTTCTCTGTACGAGCCTGTTCCAGCCTGGGTGTGAGTGGGGGTACCTGCCGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGACCTTCACCCTTTACTACCGGCAGGCTGATGAGCCAGACGGCCCCGACAGTATTGCGGCCTGGCACCTCAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CGCTGGACCAAAGTGGACACAATTGCCGCAGATGAGAGCTTCCCTGCCTCCTCTTCCTCTTCCTCATGGGCTGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGACCCCACAGGACCGGTCAGCGGGTGGGACTGCAGCTGAATGTCAAAGAGCGCAGCTTTGGTCCTCTCACTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGCGTGGCTTCTATGTGGCCTTCCAGGACACAGGGGCCTGCCTGGCCCTTGTGGCAGTCAAGCTCTTCTCCTAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACCTGTCCCTCCGTCCTGCGTGCCTTTGCCTCTTTTCCTGAGACACAGGCCAGTGGAGCTGGAGGGGCTTCCTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGTGGCAGCTGTGGGCACCTGTGTAGCTCATGCAGAACCAGAGGAGGATGGAGTAGGAGGCCAGGCAGGGGGCA 1776
Query 1 --------------------------------------ATGGTAGCTGTCGGGGGCTGCCGCTGCCAGCCTGGA 36
|||||||||||.||.|||||||||||||||||||||
Sbjct 1777 GCCCCCCAAGGTTACACTGTAATGGCGAAGGCAGGTGGATGGTAGCTGTGGGAGGCTGCCGCTGCCAGCCTGGA 1850
Query 37 TACCAACCAGCACGAGGAGACAAGGCCTGCCAAGCCTGCCCACGGGGGCT-CTATAAGTCTTCT-GCTGGGAAT 108
.||||.||.||.||.|||||||||..||||||||||||||| .|.|||.| |||||||.| .|| |||||||||
Sbjct 1851 CACCAGCCTGCTCGTGGAGACAAGCTCTGCCAAGCCTGCCC-TGAGGGATCCTATAAGGC-CCTGGCTGGGAAT 1922
Query 109 GCTCCCTGCTCACCATGCCCTGCCCGCAGTCACGCTCCCAACCCAGCAGCCCCCGTTTGCCCCTGCCTGGAGGG 182
|.||||||.|||||.||.||.||||||||.|||.|.||..||||.||||||||.||||||||.||.||..|.||
Sbjct 1923 GTTCCCTGTTCACCGTGTCCAGCCCGCAGCCACTCCCCTGACCCTGCAGCCCCAGTTTGCCCATGTCTCCAAGG 1996
Query 183 CTTCTACCGGGCCAGTTCCGACCCACCAGAGGCCCCCTGCACTGGTCCTCCATCGGCTCCCCAGGAGCTTTGGT 256
|||||||.||||||||||.||||||||||||||.||||||||||||||||||||||||||||.||||||.||||
Sbjct 1997 CTTCTACAGGGCCAGTTCGGACCCACCAGAGGCTCCCTGCACTGGTCCTCCATCGGCTCCCCGGGAGCTATGGT 2070
Query 257 TTGAGGTGCAAGGCTCAGCACTCATGCTACACTGGCGCCTGCCTCGGGAGCTGGGGGGTCGAGGGGACCTGCTC 330
||||||||||||||||.|||||||||||.||||||||.|||||||.|||||||||.||.||||||||.||||||
Sbjct 2071 TTGAGGTGCAAGGCTCGGCACTCATGCTGCACTGGCGTCTGCCTCAGGAGCTGGGTGGACGAGGGGATCTGCTC 2144
Query 331 TTCAATGTCGTGTGCAAGGAGTGTGAAGGCCGCCAGGA-ACCTGCCAGCGGTGGTGGGGGCACTTGTCACCGCT 403
||||||||.||||||||||||||||.|||.|.| ||| |.| ||||| .|||||||.|..||||.|||||
Sbjct 2145 TTCAATGTTGTGTGCAAGGAGTGTGGAGGTCAC--GGAGAGC--CCAGC---AGTGGGGGGATGTGTCGCCGCT 2211
Query 404 GCAGGGATGAGGTCCACTTCGACCCTCGCCAGAGAGGCCTGACTGAGAGCCGAGTGTTAGTGGGGGGACTCCGG 477
|||||||.|||||.||.||||||||.||||||||.||.|||||||||||.|||||||||||.|||||.|||||.
Sbjct 2212 GCAGGGACGAGGTGCATTTCGACCCCCGCCAGAGGGGACTGACTGAGAGTCGAGTGTTAGTTGGGGGGCTCCGA 2285
Query 478 GCACACGTACCCTACATCTTAGAGGTGCAGGCTGTTAATGGGGTGTCTGAGCTCAGCCCTGACCCTCCTCAGGC 551
||||||||.||.||||||||.||.|||||||||||.||||||||||||||||||||||||||||||||.|||||
Sbjct 2286 GCACACGTGCCATACATCTTGGAAGTGCAGGCTGTCAATGGGGTGTCTGAGCTCAGCCCTGACCCTCCCCAGGC 2359
Query 552 TGCAGCCATCAATGTCAGCACCAGCCATGAAGTGCCCTCTGCTGTCCCTGTGGTGCACCAGGTGAGCCGGGCAT 625
.||||||||||||||||||||||||||.|||||.||.|||||.|||||||||.||||||||||||||||||||.
Sbjct 2360 AGCAGCCATCAATGTCAGCACCAGCCACGAAGTCCCTTCTGCAGTCCCTGTGATGCACCAGGTGAGCCGGGCAG 2433
Query 626 CCAACAGCATCACGGTGTCCTGGCCGCAGCCCGACCAGACCAATGGGAACATCCTGGACTATCAGCTCCGCTAC 699
|||||||||||||.||.||||||||.|||||.||.||.||.||||||||||||||.|||||.|||||.||||||
Sbjct 2434 CCAACAGCATCACAGTATCCTGGCCACAGCCTGAGCAAACAAATGGGAACATCCTCGACTACCAGCTGCGCTAC 2507
Query 700 TATGACCAGGCAGAAGACGAATCCCACTCCTTCACCCTGACCAGCGAGACCAACACTGCCACCGTGACACAGCT 773
|||||||||||||||||.||||||||||||||||||.|||||||.|||||||||||||||||.|||||||.|.|
Sbjct 2508 TATGACCAGGCAGAAGATGAATCCCACTCCTTCACCATGACCAGTGAGACCAACACTGCCACTGTGACACGGTT 2581
Query 774 GAGCCCTGGCCACATCTATGGTTTCCAGGTGCGGGCCCGGACTGCTGCCGGCCACGGCCCCTACGGGGGCAAAG 847
|||||||||||||||||||||.||||||||||||||.||||||||.||.||||||||||||||.||||||||||
Sbjct 2582 GAGCCCTGGCCACATCTATGGCTTCCAGGTGCGGGCACGGACTGCAGCTGGCCACGGCCCCTATGGGGGCAAAG 2655
Query 848 TCTATTTCCAGACACTTCCTCAAGGGGAGCTGTCTTCCCAGCTTCCGGA-AAGACTCTCCTTGGTGATCGGCTC 920
|||||||.||||||.|.||||||||.||||||||.|||||||||||.|| ||| ||.|||||||||||.||.||
Sbjct 2656 TCTATTTTCAGACATTGCCTCAAGGTGAGCTGTCCTCCCAGCTTCCAGAGAAG-CTGTCCTTGGTGATTGGTTC 2728
Query 921 CATCCTGGGGGCTTTGGCCTTCCTCCTGCTGGCAGCCATCACCGTGCTGGCGGTCGTCTTCCAGC--------- 985
||||||||||||.|||||||||||.||.||||||||||||||.||.|||||.|||.|||||||||
Sbjct 2729 CATCCTGGGGGCCTTGGCCTTCCTTCTACTGGCAGCCATCACTGTACTGGCTGTCATCTTCCAGCGGTGAGGCC 2802
Query 986 -------------------------------------------------------------------------- 985
Sbjct 2803 CCTGTCACTCCTGTCCAACCTACCCCAGTACCATTCAAGTCCTGACAAACCCAGGAACCCCTGCAGCACTTCGC 2876
Query 986 --------------------------GGAAGCGGCGTGGGACTGGCTACACGGAGCAGCTGCAGCAATACAGCA 1033
|||||||.||||||||.||||||||.||.||.|||||.||||||||||
Sbjct 2877 ACATCCTTCTACTAGTTCATTGCAAAGGAAGCGCCGTGGGACCGGCTACACAGAACAACTGCAACAATACAGCA 2950
Query 1034 GCCCAGGACTCGGGGTGAAGTATTACATCGACCCCTCCACCTACGAGGACCCCTGTCAGGCCATCCGAGAACTT 1107
||||||||||.||.|||||||
Sbjct 2951 GCCCAGGACTTGGAGTGAAGT----------------------------------------------------- 2971
Query 1108 GCCCGGGAAGTCGATCCTGCTTATATCAAGATTGAGGAGGTCATTGGGACAGGCTCTTTTGGAGAAGTGCGCCA 1181
Sbjct 2972 -------------------------------------------------------------------------- 2971
Query 1182 GGGCCGCCTGCAGCCACGGGGACGGAGGGAGCAGACTGTGGCCATCCAGGCCCTGTGGGCCGGGGGCGCCGAAA 1255
Sbjct 2972 -------------------------------------------------------------------------- 2971
Query 1256 GCCTGCAGATGACCTTCCTGGGCCGGGCCGCAGTGCTGGGTCAGTTCCAGCACCCCAACATCCTGCGGCTGGAG 1329
Sbjct 2972 -------------------------------------------------------------------------- 2971
Query 1330 GGCGTGGTCACCAAGAGCCGACCCCTCATGGTGCTGACGGAGTTCATGGAGCTTGGCCCCCTGGACAGCTTCCT 1403
Sbjct 2972 -------------------------------------------------------------------------- 2971
Query 1404 CAGGCAGCGGGAGGGCCAGTTCAGCAGCCTGCAGCTGGTGGCCATGCAGCGGGGAGTGGCTGCTGCCATGCAGT 1477
Sbjct 2972 -------------------------------------------------------------------------- 2971
Query 1478 ACCTGTCCAGCTTTGCCTTCGTCCATCGCTCGCTGTCTGCCCACAGCGTGCTGGTGAATAGCCACTTGGTGTGC 1551
Sbjct 2972 -------------------------------------------------------------------------- 2971
Query 1552 AAGGTGGCCCGTCTTGGCCACAGTCCTCAGGGCCCAAGTTGTTTGCTTCGCTGGGCAGCCCCAGAGGTCATTGC 1625
Sbjct 2972 -------------------------------------------------------------------------- 2971
Query 1626 ACATGGAAAGCATACAACATCCAGTGATGTCTGGAGCTTTGGGATACTCATGTGGGAAGTGATGAGTTATGGAG 1699
Sbjct 2972 -------------------------------------------------------------------------- 2971
Query 1700 AACGGCCTTACTGGGACATGAGTGAGCAGGAGGTACTAAATGCAATAGAGCAGGAGTTCCGGCTGCCCCCGCCT 1773
Sbjct 2972 -------------------------------------------------------------------------- 2971
Query 1774 CCAGGCTGTCCTCCTGGATTACATCTACTTATGTTGGACACTTGGCAGAAGGACCGTGCCCGGCGGCCTCATTT 1847
Sbjct 2972 -------------------------------------------------------------------------- 2971
Query 1848 TGACCAGCTGGTGGCTGCATTTGACAAGATGATCCGCAAGCCAGATACCCTGCAGGCTGGCGGGGACCCAGGGG 1921
Sbjct 2972 -------------------------------------------------------------------------- 2971
Query 1922 AAAGGCCTTCCCAGGCCCTTCTGACCCCTGTGGCCCTGGACTTTCCTTGTCTGGACTCACCCCAGGCCTGGCTT 1995
Sbjct 2972 -------------------------------------------------------------------------- 2971
Query 1996 TCAGCCATTGGACTGGAGTGCTACCAGGACAACTTCTCCAAGTTTGGCCTCTGTACCTTCAGTGATGTGGCTCA 2069
Sbjct 2972 -------------------------------------------------------------------------- 2971
Query 2070 GCTCAGCCTAGAAGACCTGCCTGCCCTGGGCATCACCCTGGCTGGCCACCAGAAGAAGCTGCTGCACCACATCC 2143
Sbjct 2972 -------------------------------------------------------------------------- 2971
Query 2144 AGCTCCTTCAGCAACACCTGAGGCAGCAGGGCTCAGTGGAGGTC 2187
Sbjct 2972 -------------------------------------------- 2971
