Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10807
- Subject:
- XR_001750187.1
- Aligned Length:
- 2417
- Identities:
- 969
- Gaps:
- 1448
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGGGTGCTCCCACTTAGAGGTCACGCGCGGCGTCGGGCGTTCCTGAGACCGTCGGGCTCCCTGGCTCGGTCAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGGCTCAGGCACTACTCCCCTCTACCCTCCTCTCGGTCTTTAAAAGGAAGAAGGGGCTTATCGTTAAGTCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGTGATCTTTTCAGTTTCTCCAGCTGCTGGCTTTTTGGACACCCACTCCCCCGCCAGGAGGCAGTTGCAAGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGAGGCTGCGAGAAATAACTGCCTCTTGAAACTTGCAGGGCGAAGAGCAGGCGGCGAGCGCTGGGCCGGGGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGACCACCCGAGCTGCGACGGGCTCTGGGGCTGCGGGGCAGGGCTGGCGCCCGGAGCCTGAGCTGCAGGAGGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCTCGCTTTCCTCAACAGGTGGCGGCGGGGCGCGCGCCGGGAGACCCCCCCTAATGCGGGAAAAGCACGTGTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCATTTTAGAGAAGGCAAGGCCGGTGTGTTTATCTGCAAGCCATTATACTTGCCCACGAATCTTTGAGAACAT 518
Query 1 ---------------------------------------------------------ATGGATATAAAAAACTC 17
|||||||||||||||||
Sbjct 519 TATAATGACCTTTGTGCCTCTTCTTGCAAGGTGTTTTCTCAGCTGTTATCTCAAGACATGGATATAAAAAACTC 592
Query 18 ACCATCTAGCCTTAATTCTCCTTCCTCCTACAACTGCAGTCAATCCATCTTACCCCTGGAGCACGGCTCCATAT 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACCATCTAGCCTTAATTCTCCTTCCTCCTACAACTGCAGTCAATCCATCTTACCCCTGGAGCACGGCTCCATAT 666
Query 92 ACATACCTTCCTCCTATGTAGACAGCCACCATGAATATCCAGCCATGACATTCTATAGCCCTGCTGTGATGAAT 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACATACCTTCCTCCTATGTAGACAGCCACCATGAATATCCAGCCATGACATTCTATAGCCCTGCTGTGATGAAT 740
Query 166 TACAGCATTCCCAGCAATGTCACTAACTTGGAAGGTGGGCCTGGTCGGCAGACCACAAGCCCAAATGTGTTGTG 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TACAGCATTCCCAGCAATGTCACTAACTTGGAAGGTGGGCCTGGTCGGCAGACCACAAGCCCAAATGTGTTGTG 814
Query 240 GCCAACACCTGGGCACCTTTCTCCTTTAGTGGTCCATCGCCAGTTATCACATCTGTATGCGGAACCTCAAAAGA 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCCAACACCTGGGCACCTTTCTCCTTTAGTGGTCCATCGCCAGTTATCACATCTGTATGCGGAACCTCAAAAGA 888
Query 314 GTCCCTGGTGTGAAGCAAGATCGCTAGAACACACCTTACCTGTAAACAGAGAGACACTGAAAAGGAAGGTTAGT 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GTCCCTGGTGTGAAGCAAGATCGCTAGAACACACCTTACCTGTAAACAGAGAGACACTGAAAAGGAAGGTTAGT 962
Query 388 GGGAACCGTTGCGCCAGCCCTGTTACTGGTCCAGGTTCAAAGAGGGATGCTCACTTCTGCGCTGTCTGCAGCGA 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGGAACCGTTGCGCCAGCCCTGTTACTGGTCCAGGTTCAAAGAGGGATGCTCACTTCTGCGCTGTCTGCAGCGA 1036
Query 462 TTACGCATCGGGATATCACTATGGAGTCTGGTCGTGTGAAGGATGTAAGGCCTTTTTTAAAAGAAGCATTCAAG 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTACGCATCGGGATATCACTATGGAGTCTGGTCGTGTGAAGGATGTAAGGCCTTTTTTAAAAGAAGCATTCAAG 1110
Query 536 GACATAATGATTATATTTGTCCAGCTACAAATCAGTGTACAATCGATAAAAACCGGCGCAAGAGCTGCCAGGCC 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GACATAATGATTATATTTGTCCAGCTACAAATCAGTGTACAATCGATAAAAACCGGCGCAAGAGCTGCCAGGCC 1184
Query 610 TGCCGACTTCGGAAGTGTTACGAAGTGGGAATGGTGAAGTGTGGCTCCCGGAGAGAGAGATGTGGGTACCGCCT 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGCCGACTTCGGAAGTGTTACGAAGTGGGAATGGTGAAGTGTGGCTCCCGGAGAGAGAGATGTGGGTACCGCCT 1258
Query 684 TGTGCGGAGACAGAGAAGTGCCGACGAGCAGCTGCACTGTGCCGGCAAGGCCAAGAGAAGTGGCGGCCACGCGC 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGTGCGGAGACAGAGAAGTGCCGACGAGCAGCTGCACTGTGCCGGCAAGGCCAAGAGAAGTGGCGGCCACGCGC 1332
Query 758 CCCGAGTGCGGGAGCTGCTGCTGGACGCCCTGAGCCCCGAGCAGCTAGTGCTCACCCTCCTGGAGGCTGAGCCG 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCCGAGTGCGGGAGCTGCTGCTGGACGCCCTGAGCCCCGAGCAGCTAGTGCTCACCCTCCTGGAGGCTGAGCCG 1406
Query 832 CCCCATGTGCTGATCAGCCGCCCCAGTGCGCCCTTCACCGAGGCCTCCATGATGATGTCCCTGACCAAGTTGGC 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CCCCATGTGCTGATCAGCCGCCCCAGTGCGCCCTTCACCGAGGCCTCCATGATGATGTCCCTGACCAAGTTGGC 1480
Query 906 CGACAAGGAGTTGGTACACATGATCAGCTGGGCCAAGAAGATTCCCGGGATGAGGGGAAATGCG---------- 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CGACAAGGAGTTGGTACACATGATCAGCTGGGCCAAGAAGATTCCCGGGATGAGGGGAAATGCGTAGAAGGAAT 1554
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1555 TCTGGAAATCTTTGACATGCTCCTGGCAACTACTTCAAGGTTTCGAGAGTTAAAACTCCAACACAAAGAATATC 1628
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1629 TCTGTGTCAAGGCCATGATCCTGCTCAATTCCAGTATGTACCCTCTGGTCACAGCGACCCAGGATGCTGACAGC 1702
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1703 AGCCGGAAGCTGGCTCACTTGCTGAACGCCGTGACCGATGCTTTGGTTTGGGTGATTGCCAAGAGCGGCATCTC 1776
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1777 CTCCCAGCAGCAATCCATGCGCCTGGCTAACCTCCTGATGCTCCTGTCCCACGTCAGGCATGCGAGGGCAGAAA 1850
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1851 AGGCCTCTCAAACACTCACCTCATTTGGAATGAAGATGGAGACTCTTTTGCCTGAAGCAACGATGGAGCAGTGA 1924
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1925 CCCTCTAATCAACTCGGTGGCCTAAAGAAAAATCTTGGGTAACATTTTCACTTCAGTTTCCCTCTGGGATCATT 1998
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1999 GTAATCCATGAAAAAAATAATTTTAAAGAAAGAGTTAAAATACTTTGAAGTTAGTTATGTGGTTAAAAACCACC 2072
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2073 TTCCTTTCTATTATCAATCCAACAATTTGATAACTGTAAACGCTAAAGTGAAGACGGATTCTCTTCAGATGGTC 2146
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2147 TCCTTAACTGCCCAGGGCTTGCAGATGTCTCACCCATGAGGGGCACCAATGTAGAAAGCTGAGGCTTCATCTAC 2220
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2221 TGATGAGCTTCACTGGTTTCCCCTGAGGTTTGTGCTTTGGCAGAGAAGGGGAGGAGGGGACTGGGATTGTGTGG 2294
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2295 TCAGCTGTGCCTGCCAACAGATGCAGGTTAGGAACTGTGTTCAGTATCTTCCAATAAGAAAGGGGAAATGCCGA 2368
Query 970 ------------------------------------------------- 969
Sbjct 2369 TGCCTATCCTCTTTGTTTAGGTAGAAAGTAAAATGCTACTGGACTTAAA 2417
