Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10835
Subject:
XM_011535713.2
Aligned Length:
1416
Identities:
1233
Gaps:
174

Alignment

Query    1  ATGCCTTATTTTACAAGACTCATTTTGTTCTTGTTTTGCTTGATGGTTCTCGTGGAGAGCAGAAAACCCAAGAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GAAGCGATGGA---------CAG---GG--CAGG--TGGAAATGCCCAAGCCAAGTCACTTATATAAGAAGAAC  132
                  |||||         |||   ||  ||||  |||                 |||    ||||       
Sbjct    1  ------ATGGATTACACATTCAGCCTGGCCCAGGGATGG-----------------CAC----ATAA-------  40

Query  133  CTTGATGTGACCAAGATCCGGAAGGGAAAGCCTCAGCAGCTTCTCAGA----GTGGA-CGAGCACGACTTCAGC  201
                               ||.|||.|.||           ||.|.||    ||||| .||||      |||  
Sbjct   41  -------------------GGCAGGCACAG-----------TCCCTGACGTTGTGGAGAGAGC------TCA--  76

Query  202  ATGAGACCCGCCTTCGGAGGCCCTGCCATCCCGGTGGGCGTGGACGTACAGGTGGAGAGCCTGGACAGCATCTC  275
              ||.||||..|     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   77  --GACACCCAAC-----AGGCCCTGCCATCCCGGTGGGCGTGGACGTACAGGTGGAGAGCCTGGACAGCATCTC  143

Query  276  CGAGGTGGACATGGACTTCACTATGACCCTGTACCTGCGGCATTACTGGAAGGATGAGAGGCTAGCTTTCTCCA  349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  144  CGAGGTGGACATGGACTTCACTATGACCCTGTACCTGCGGCATTACTGGAAGGATGAGAGGCTAGCTTTCTCCA  217

Query  350  GCGCCAGCAACAAGAGCATGACCTTCGATGGCCGGCTGGTGAAGAAGATCTGGGTCCCTGATGTCTTCTTTGTT  423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  218  GCGCCAGCAACAAGAGCATGACCTTCGATGGCCGGCTGGTGAAGAAGATCTGGGTCCCTGATGTCTTCTTTGTT  291

Query  424  CACTCCAAAAGATCGTTCACTCATGACACCACCACTGACAACATCATGCTGAGGGTGTTCCCAGATGGACACGT  497
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  292  CACTCCAAAAGATCGTTCACTCATGACACCACCACTGACAACATCATGCTGAGGGTGTTCCCAGATGGACACGT  365

Query  498  GCTGTACAGCATGAGGATTACGGTCACTGCCATGTGCAACATGGACTTCAGCCACTTTCCCCTGGACTCCCAGA  571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  366  GCTGTACAGCATGAGGATTACGGTCACTGCCATGTGCAACATGGACTTCAGCCACTTTCCCCTGGACTCCCAGA  439

Query  572  CCTGTTCTTTGGAGCTGGAGAGCTATGCCTATACAGATGAAGATCTAATGCTGTACTGGAAGAATGGGGATGAA  645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  440  CCTGTTCTTTGGAGCTGGAGAGCTATGCCTATACAGATGAAGATCTAATGCTGTACTGGAAGAATGGGGATGAA  513

Query  646  TCCCTAAAAACAGATGAGAAGATCTCCTTGTCTCAGTTTCTGATTCAGAAATTTCACACAACTTCCAGGCTGGC  719
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  514  TCCCTAAAAACAGATGAGAAGATCTCCTTGTCTCAGTTTCTGATTCAGAAATTTCACACAACTTCCAGGCTGGC  587

Query  720  CTTCTACAGCAGCACTGGCTGGTACAACCGTCTGTACATTAACTTCACGTTGCGTCGCCACATCTTCTTCTTCT  793
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  588  CTTCTACAGCAGCACTGGCTGGTACAACCGTCTGTACATTAACTTCACGTTGCGTCGCCACATCTTCTTCTTCT  661

Query  794  TGCTCCAAACATATTTCCCTGCCACTCTGATGGTCATGCTGTCCTGGGTGTCCTTCTGGATCGACCGCAGAGCT  867
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  662  TGCTCCAAACATATTTCCCTGCCACTCTGATGGTCATGCTGTCCTGGGTGTCCTTCTGGATCGACCGCAGAGCT  735

Query  868  GTGCCTGCCAGAGTTTCACTGGGTATCACGACGGTGCTGACCATGACCACCATCATCACGGGCGTGAATGCCTC  941
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  736  GTGCCTGCCAGAGTTTCACTGGGTATCACGACGGTGCTGACCATGACCACCATCATCACGGGCGTGAATGCCTC  809

Query  942  CATGCCGCGCGTCTCCTACGTCAAGGCCGTGGACATCTACCTCTGGGTCAGCTTTGTGTTCGTGTTCCTCTCGG  1015
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  810  CATGCCGCGCGTCTCCTACGTCAAGGCCGTGGACATCTACCTCTGGGTCAGCTTTGTGTTCGTGTTCCTCTCGG  883

Query 1016  TGCTGGAGTATGCGGCTGTCAACTACCTGACCACCGTGCAGGAGCGCAAGGAACGGAAGCTGCGGGAGAAGTTC  1089
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  884  TGCTGGAGTATGCGGCTGTCAACTACCTGACCACCGTGCAGGAGCGCAAGGAACGGAAGCTGCGGGAGAAGTTC  957

Query 1090  CCGTGCATGTGTGGAATGCTTCATTCAAAAACCATGATGCTGGATGGAAGCTACAGTGAGTCTGAGGCCAACAG  1163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  958  CCGTGCATGTGTGGAATGCTTCATTCAAAAACCATGATGCTGGATGGAAGCTACAGTGAGTCTGAGGCCAACAG  1031

Query 1164  CCTGGCTGGGTACCCCAGAAGCCATATCCTGACAGAAGAAGAAAGGCAAGACAAAATAGTGGTCCACCTGGGCC  1237
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032  CCTGGCTGGGTACCCCAGAAGCCATATCCTGACAGAAGAAGAAAGGCAAGACAAAATAGTGGTCCACCTGGGCC  1105

Query 1238  TGAGTGGTGAAGCCAACGCTGCCAGAAAGAAGGGGCTTCTGAAGGGCCAGACGGGTTTTCGTATCTTCCAGAAT  1311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1106  TGAGTGGTGAAGCCAACGCTGCCAGAAAGAAGGGGCTTCTGAAGGGCCAGACGGGTTTTCGTATCTTCCAGAAT  1179

Query 1312  ACCCATGCCATTGACAAATACTCTAGGTTGATATTCCCTGCCTCCTACATATTTTTCAACTTAATTTATTGGTC  1385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1180  ACCCATGCCATTGACAAATACTCTAGGTTGATATTCCCTGCCTCCTACATATTTTTCAACTTAATTTATTGGTC  1253

Query 1386  AGTGTTTTCC  1395
            ||||||||||
Sbjct 1254  AGTGTTTTCC  1263

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