Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_10852
• Subject: NM_001113384.1
• Aligned Length: 1072
• Identities: 783
• Gaps: 176

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGGATGTACGCTGAGCGCAGAGGAGAGAGCCGCCCTCGAGCGGAGCAAGGCGATTGAGAAAAACCTCAAAGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGATGGCATCAGCGCCGCCAAAGACGTGAAATTACTCCTGCTGGGGGCTGGAGAATCAGGAAAAAGCACCATTG  148

Query    1  --------ATGAAGATCATCCATGAAGATGGCTTCTCCGGAGAAGACGTGAAACAGTACAAGCCTGTTGTCTAC  66
                    |||||||||||||||||||||||||||||.||.|||||||||||.||||||||||||||.||||||
Sbjct  149  TGAAGCAGATGAAGATCATCCATGAAGATGGCTTCTCTGGGGAAGACGTGAAGCAGTACAAGCCTGTGGTCTAC  222

Query   67  AGCAACACTATCCAGTCCCTGGCAGCCATCGTCCGGGCCATGGACACTTTGGGCATCGAATATGGTGATAAGGA  140
            ||||||||.||||||||.|||||.|||||.||||||||||||||||||||||||.|.||.||||||||.|||||
Sbjct  223  AGCAACACCATCCAGTCTCTGGCGGCCATTGTCCGGGCCATGGACACTTTGGGCGTGGAGTATGGTGACAAGGA  296

Query  141  GAGAAAGGCTGACGCCAAGATGGTGTGTGATGTGGTGAGTCGGATGGAAGACACCGAGCCCTTCTCTGCAGAGC  214
            |||.|||.|.|||.||||||||||||||||.|||||||||||.|||||||||||.||.||.|||||||||||.|
Sbjct  297  GAGGAAGACGGACTCCAAGATGGTGTGTGACGTGGTGAGTCGTATGGAAGACACTGAACCGTTCTCTGCAGAAC  370

Query  215  TGCTTTCTGCCATGATGCGGCTCTGGGGCGACTCAGGAATCCAAGAGTGCTTCAACCGGTCCCGGGAGTATCAG  288
            |.|||||||||||||||||.||||||||||||||.||.|||||.||||||||||||||.||.||||||||||||
Sbjct  371  TTCTTTCTGCCATGATGCGACTCTGGGGCGACTCGGGGATCCAGGAGTGCTTCAACCGATCTCGGGAGTATCAG  444

Query  289  CTCAACGACTCTGCCAAATACTACCTGGACAGCCTGGATCGGATTGGGGCCGCCGACTACCAGCCCACCGAGCA  362
            |||||.|||||||||||||||||||||||||||||||||||||||||.||||..||||||||||||||.|||||
Sbjct  445  CTCAATGACTCTGCCAAATACTACCTGGACAGCCTGGATCGGATTGGAGCCGGTGACTACCAGCCCACTGAGCA  518

Query  363  GGACATCCTCCGAACCAGGGTCAAAACCACTGGCATCGTAGAAACCCACTTCACATTCAAGAACCTCCACTTCA  436
            ||||||||||||||||||.||||||||.||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct  519  GGACATCCTCCGAACCAGAGTCAAAACAACTGGCATCGTAGAAACCCACTTCACCTTCAAGAACCTCCACTTCA  592

Query  437  GGCTGTTTGACGTCGGAGGCCAGCGATCTGAACGCAAGAAGTGGATCCATTGCTTCGAGGACGTCACGGCCATC  510
            ||||||||||||||||.||||||||||||||||||||||||||||||||.|||||.|||||.||||||||||||
Sbjct  593  GGCTGTTTGACGTCGGGGGCCAGCGATCTGAACGCAAGAAGTGGATCCACTGCTTTGAGGATGTCACGGCCATC  666

Query  511  ATTTTCTGTGTCGCGCTCAGCGGCTATGACCAGGTGCTCCACGAAGACGAAACCACGAACCGCATGCACGAGTC  584
            ||.|||||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||
Sbjct  667  ATCTTCTGTGTCGCACTCAGCGGCTATGACCAGGTGCTCCACGAGGACGAAACCACGAACCGCATGCACGAATC  740

Query  585  TCTCATGCTCTTCGACTCCATCTGTAACAACAAGTTCTTCATCGATACCTCCATCATTCTCTTCCTCAACAAGA  658
            .||.|.||||||||||..||||||.||||||||||..||||..||.||.||.||.||.||.||.||||||||||
Sbjct  741  CCTGAAGCTCTTCGACAGCATCTGCAACAACAAGTGGTTCACAGACACATCTATTATCCTGTTTCTCAACAAGA  814

Query  659  AAGATCTCTTTGGCGAGAAGATCAAGAAGTCACCTTTGACCATCTGCTTTCCTGAATACACAGGCCCCAATACC  732
            |.||..|.||||..|||||||||||||||||.||..|.|||||||||||||||||||||||||||||||.|.||
Sbjct  815  AGGACATATTTGAGGAGAAGATCAAGAAGTCCCCACTCACCATCTGCTTTCCTGAATACACAGGCCCCAGTGCC  888

Query  733  TATGA-AGACGCAGCCGCCTACATCCAAGCACAATTTGAAAGCAAAAA-----CCGCTCACCCAACAAAGAAAT  800
            | |.| |||.||.|..||..|||||||||..||.|.|||.||.||.||     |.||||     ||||.|||.|
Sbjct  889  T-TCACAGAAGCTGTGGCTCACATCCAAGGGCAGTATGAGAGTAAGAATAAGTCAGCTC-----ACAAGGAAGT  956

Query  801  ATATTGTCA--CATG--ACTTGTGCCACAGACACGAATAACATCCAGGTGGTGTTCGACGCCGTCACCGACATC  870
            .||    ||  ||||  ||.||||||||.|||||.||.||||||||..|.||.||.||.|||||.||.||..||
Sbjct  957  CTA----CAGCCATGTCACCTGTGCCACGGACACCAACAACATCCAATTCGTCTTTGATGCCGTGACAGATGTC  1026

Query  871  ATCATTGCCAACAACCTCCGGGGCTGCGGCTTGTAC  906
            |||||.|||||.|||||.||||||||.||..|.|||
Sbjct 1027  ATCATCGCCAAAAACCTACGGGGCTGTGGACTCTAC  1062