Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_10875
• Subject: XM_017010811.1
• Aligned Length: 1329
• Identities: 954
• Gaps: 249

Alignment

Query    1  ATGCGGGTGATGGCGCCCCGAACCCTCATCCTGCTGCTCTCGGGAGCCCTGGCCCTGACCGAGACCTGGGCCGG  74
                     |||||||||||||.||||.|||||||||||||.||.|||||||||||||||||.||.|||||.||
Sbjct    1  ---------ATGGCGCCCCGAAGCCTCCTCCTGCTGCTCTCAGGGGCCCTGGCCCTGACCGATACTTGGGCGGG  65

Query   75  CTCCCACTCCATGAGGTATTTCTACACCGCTGTGTCCCGGCCCGGCCGCGGGGAGCCCCACTTCATCGCAGTGG  148
            ||||||||||.|||||||||||..||||||||||||.||||||||||||||||||||||.||.||||||.||||
Sbjct   66  CTCCCACTCCTTGAGGTATTTCAGCACCGCTGTGTCGCGGCCCGGCCGCGGGGAGCCCCGCTACATCGCCGTGG  139

Query  149  GCTACGTGGACGACACGCAGTTCGTGCGGTTCGACAGCGACGCCGCGAGTCCGAGAGGGGAGCCGCGGGCGCCG  222
            ..|||||.|||||||||||.|||.||||||||||||||||||||||||.||||||...|||||||||||.||||
Sbjct  140  AGTACGTAGACGACACGCAATTCCTGCGGTTCGACAGCGACGCCGCGATTCCGAGGATGGAGCCGCGGGAGCCG  213

Query  223  TGGGTGGAGCAGGAGGGGCCGGAGTATTGGGACCGGGAGA-CACAGAAGTA---CAAGCGCC-AGGCACAGACT  291
            |||||||||||.|||||||||.||||||||||   |..|| ||||| .|||   |||| ||| |.|||||||||
Sbjct  214  TGGGTGGAGCAAGAGGGGCCGCAGTATTGGGA---GTGGACCACAG-GGTACGCCAAG-GCCAACGCACAGACT  282

Query  292  GACCGAGTGAGCCTGCGGAACCTGCGCGGCTACTACAACCAGAGCGAGGCCAGGTCTCACATCATCCAGAGGAT  365
            |||||||||..||||.|||||||||.|.||..||||||||||||||||||..|||||||||.|.|||||.|.||
Sbjct  283  GACCGAGTGGCCCTGAGGAACCTGCTCCGCCGCTACAACCAGAGCGAGGCTGGGTCTCACACCCTCCAGGGAAT  356

Query  366  GTATGGCTGCGACGTGGGGCCCGACGGGCGCCTCCTCCGCGGGTATGACCAGTACGCCTACGACGGCAAGGATT  439
            |.|||||||||||.|||||||||||||.||||||||||||||||||.|||||.||||.||||||||||||||||
Sbjct  357  GAATGGCTGCGACATGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCGTACGACGGCAAGGATT  430

Query  440  ACATCGCCCTGAACGAGGATCTGCGCTCCTGGACCGCCGCGGACACGGCGGCTCAGATCACCCAGCGCAAGTGG  513
            |||||.|||||||||||||.|||||||||||||||||.||||||||.|.|||||||||||||||||||...|..
Sbjct  431  ACATCTCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTGGCTCAGATCACCCAGCGCTTCTAT  504

Query  514  GAGGCGGCCCGTGAG------GCGGAGCAGCTGAGAGCCTACCTGGAGGGCCTGTGCGTGGAGTGGCTCCGCAG  581
            |||||      .|||      ||.|||.||.|.||..||||||||||||||..||||.||||||.|||||||||
Sbjct  505  GAGGC------AGAGGAATATGCAGAGGAGTTCAGGACCTACCTGGAGGGCGAGTGCCTGGAGTTGCTCCGCAG  572

Query  582  ATACCTGAAGAATGGGAAGGAGACGCTGCAGCGCGCGGAACACCCAAAGACACACGTGACCCACCATCCCGTCT  655
            ||||.||.|||||||||||||||||||.||||||||.||.|..||||||.|||||||..|||||||.|||.|||
Sbjct  573  ATACTTGGAGAATGGGAAGGAGACGCTACAGCGCGCAGATCCTCCAAAGGCACACGTTGCCCACCACCCCATCT  646

Query  656  CTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACCTGGCAGTGG  729
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||.||
Sbjct  647  CTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACGCTGACCTGGCAGCGG  720

Query  730  GATGGGGAGGACCAAACTCAGGACACTGAGCTTGTGGAGACCAGGCCAGCAGGAGATGGAACCTTCCAGAAGTG  803
            |||||||||||.||.||.||||||||.||||||||||||||||||||.|||||.||||||||||||||||||||
Sbjct  721  GATGGGGAGGAACAGACCCAGGACACAGAGCTTGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTG  794

Query  804  GGCAGCTGTGGTGGTGCCTTCTGGAGAAGAGCAGAGATACACGTGCCATGTGCAGCACGAGGGGCTGCCGGAGC  877
            |||.|||||||||||||||.|||||||.||.|||||||||||.||||||||||||||||||||||||||..|||
Sbjct  795  GGCCGCTGTGGTGGTGCCTCCTGGAGAGGAACAGAGATACACATGCCATGTGCAGCACGAGGGGCTGCCCCAGC  868

Query  878  CCCTCACCCTGAGATGGGAGCCGTCTTCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTGGCTGTC  951
            ||||||.||||||||||||||.||||.||||||||||||||||||||||||||||||||||||||||.|.||||
Sbjct  869  CCCTCATCCTGAGATGGGAGCAGTCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTTGTTGTC  942

Query  952  C-TGGCTGTCCTAGCTGT----CCTAGGAGCTGTGGTGGCTGTTGTGATGTGTAGGAGGAAGAGCTCAGGGCAT  1020
            | |||       ||||||    .|| |||||||||||.||||.|||||||||.||||.|||||||||||     
Sbjct  943  CTTGG-------AGCTGTGGTCACT-GGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAGAGCTCAG-----  1003

Query 1021  TTTCTTCCCACAGGT----GGAAA----AGGA----------------------------GGGAGCTGCTCT--  1056
              .||.|.||..|||    |||||    |.||                            ||| |.||||||  
Sbjct 1004  --CCTACTCAGTGGTCAGCGGAAACTTGATGATAACATGGTGGTCAAGCTTATTTCTCCTGGG-GGTGCTCTTC  1074

Query 1057  CA----------GGCTGCGTCC--AGCAACAGTGCCCAGGGC-------------------------TCT----  1089
            ||          ||||||.|||  ||..||||||.|..||||                         |||    
Sbjct 1075  CAAGGATATTTGGGCTGCCTCCGGAGTCACAGTGTCTTGGGCCGCCGGAAGGTGGGTGACATGTGGATCTTGTT  1148

Query 1090  ---------GATGAG----TCTCTCATC-------------GCTTGTAAAGCC---------------------  1116
                     |.||.|    |||.|||.|             .||||.||||||                     
Sbjct 1149  TTTTTTGTGGCTGTGGACATCTTTCAACACTGCCTTCTTGGCCTTGCAAAGCCTTCGCTTTGGCTTCGGCTTTA  1222

Query 1117  -----------------------------------------------------------------------  1116
                                                                                   
Sbjct 1223  GGAGGGGCAGGAGCTTCCTTCTTCGTTCTTGGCACCATCTTATGAAAAGGGTCCAGATTAAGATTTTTGAC  1293