Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10887
- Subject:
- XR_868869.2
- Aligned Length:
- 3281
- Identities:
- 658
- Gaps:
- 2565
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCCTTCTGGGAGGGACCGAGTGAGAACCCCTTTGGGACGTGTAGAAATATTTGTGTGGTTCGAGAATATTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCGGACGGGCTTGGCAAAGGCGTAGCTGCAGAGAGCACGCTTGGGTGGAGAGGGCCGCACGCCCCAGCGCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTAAGCCCCTCCCGACGGCGTTATTTCAAACTGCGCGACCGTTTCTCCGCTCCCTACGCGGAGGTGGGGGCCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACCTAGTTCCGGACGTAGTAACACGCCGAGCGCGAGCCTTCCGCAATTCACGGAACACAGTTGCGCAAGTGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTAAAGCAGTCCCGCTGTACCTAAAGGGGGAGTGTCACGTACTTGGCGTAAGGAGAGTGTAGGCCCTTCCCGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTGGCGGCGGTTAGGGCGTTTACGTAACGGCGTGACGTAAGCGGAGACGCGTTAGTGGGGGGAAGGTTCTAGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAGCGGCGGTCTCGGCTCCAGCGGCAGTAGCAGCGGCGCCGGTCCCGTGTGCAGGAGCTCCTTTGCGGCCCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTCTTGGCCATCGCCTGCTCTCCCCACAGCGCCAGGACGAGTCCCGTGCGCGTCCGTCCGCGGAGGTCTTTCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CATCTCGCTCGGCTGCGGGAAATCGGGCTGAAGCGACTGAGTCCGCGATGGAGAAAACTTTAGAAACTGTTCCT 666
Query 1 ATGG---------AGAGAGAAAAGGAACAGTTCCGTAAGCTCTTTATTGGTGGCTTAAGCTTTGAAACCACAGA 65
.||| ||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTGGAGAGGAAAAAGAGAGAAAAGGAACAGTTCCGAAAGCTCTTTATTGGTGGCTTAAGCTTTGAAACCACAGA 740
Query 66 AGAAAGTTTGAGGAACTACTACGAACAATGGGGAAAGCTTACAGACTGTGTGGTAATGAGGGATCCTGCAAGCA 139
||||||||||||.||||||||.||.||||||||||||||.||||||||||||||.|||.|||||||||||||||
Sbjct 741 AGAAAGTTTGAGAAACTACTATGAGCAATGGGGAAAGCTCACAGACTGTGTGGTTATGCGGGATCCTGCAAGCA 814
Query 140 AAAGATCAAGAGGATTTGGTTTTGTAACTTTTTCATCCATGGCTGAGGTTGATGCTGCCATGGCTGCAAGACCT 213
|||||||||||||||||||.|||||||||||.|||||||||||.||||||||.|||||||||||||||||.||.
Sbjct 815 AAAGATCAAGAGGATTTGGCTTTGTAACTTTCTCATCCATGGCCGAGGTTGACGCTGCCATGGCTGCAAGGCCC 888
Query 214 CATTCAATTGATGGGAGAGTAGTTGAGCCAAAACGTGCTGTAGCAAGAGAGGAATCTGGAAAACCAGGGGCTCA 287
|||||.||||||||.||.|||||||||||||||||||||||||||||||||||.||||||||||||||.||.||
Sbjct 889 CATTCCATTGATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCAAGAGAGGAGTCTGGAAAACCAGGAGCCCA 962
Query 288 TGTAACTGTGAAGAAGCTGTTTGTTGGCGGAATTAAAGAAGATACTGAGGAACATCACCTTAGAGATTACTTTG 361
|||.|||||||||||||||||||||||.||||||||.|||||||||||||||||.|||||||||||||||||||
Sbjct 963 TGTGACTGTGAAGAAGCTGTTTGTTGGTGGAATTAAGGAAGATACTGAGGAACACCACCTTAGAGATTACTTTG 1036
Query 362 AGGAATATGGAAAAATTGATACCATTGAGATAATTACTGATAGGCAGTCTGGAAAGAAAAGAGGCTTTGGCTTT 435
|.||.|||||||||||||||||.|||||.||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1037 AAGAGTATGGAAAAATTGATACTATTGAAATAATTACCGATAGGCAGTCTGGAAAGAAAAGAGGCTTTGGCTTT 1110
Query 436 GTTACTTTTGATGACCATGATCCTGTGGATAAAATCGTATTGCAGAAATACCATACCATCAATGGTCATAATGC 509
|||||||||||||||||||||||||||||||||||.||.|||||.|||||.||.|||||.||||||||.|||||
Sbjct 1111 GTTACTTTTGATGACCATGATCCTGTGGATAAAATTGTCTTGCAAAAATATCACACCATAAATGGTCACAATGC 1184
Query 510 AGAAGTAAGAAAGGCTTTGTCTAGACAAGAAATGCAGGAGGACC------------------------------ 553
||||||.||||||||.|||||||||||||||||||||||.|.||
Sbjct 1185 AGAAGTTAGAAAGGCATTGTCTAGACAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGGAAGAGGAGGAAACT 1258
Query 554 ----------------------TGGAGGTGGCAATTTTGGAGGTAGCCCCGGTTATGGAGGAGGA--------- 596
|||.||||||||||||||| || .|||..||||
Sbjct 1259 TTGGTTTTGGGGATTCTCGTGGTGGCGGTGGCAATTTTGGA-----CC-------AGGACCAGGAAGCAACTTT 1320
Query 597 AGAGGAGGATATGGTGG---TGGA---GGACCTGGATATGGCAACCAGGGTGG-------GGGCTACGGAGGTG 657
||.||.||||.||.||| .||| ||||.|||||.||| ||.||| ||| ||.|||||.|
Sbjct 1321 AGGGGGGGATCTGATGGATACGGAAGTGGACGTGGATTTGG------GGATGGCTATAATGGG-TATGGAGGAG 1387
Query 658 GTTATGACAACTATGGAGGAGGAAATTATGGAAGTGGAAATTACAATGATTTTGGAAATTATAACCAGCAACCT 731
| |.|| ||||||||||||||||||||||.||||||||||||||||||||||||||||||.|||
Sbjct 1388 G-------ACCT-----GGAGGAAATTATGGAAGTGGAAGTTACAATGATTTTGGAAATTATAACCAGCAGCCT 1449
Query 732 TCTAACTACGGTCCAA---------------------------------------------------------- 747
||||||||.|||||||
Sbjct 1450 TCTAACTATGGTCCAATGAAGAGTGGAAACTTTGGGGGTAGCAGGAACATGGGAGGACCATATGGTGGAGGGAA 1523
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1524 CTATGGTCCTGGAGGAAGTGGAGGAAGTGGTGGCTATGGTGGAAGGAGCAGATATTAAGCTTCTTCCTACTTAC 1597
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1598 CATGGGCTTCACTGTATAAATAGGAGAGGATGAGAGCCCAGAGGTAACAGAACAGCTTCAGGTTATGGAAATAA 1671
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1672 CAATGTTAAGGAAACTCTTATCTCAGTCATGCATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGC 1745
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1746 AGACAGCCATTTTGTGAATGGATTGGATTATTTAATAACATTACCTTACTGTGGAGGAAGGATTGTAAAAAAAA 1819
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1820 ATGCCTTTGAGACAGTTTCTTAGCTTTTTAATTGTTGTTTCTTTCTAGTGGTCTTTGTAAGAGTGTAGAAGCAT 1893
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1894 TCCTTCTTTGATAATGTTAAATTTGTAAGTTTCAGGTGACATGTGAAACCTTTTTTAAGATTTTTCTCAAAAGT 1967
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1968 TTTGAAAAGCTATTAGCCAGGATCATGGTGTAATAAGACATAACGTTTTTCCTTTAAAAATTTTAAGTGCGTGT 2041
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2042 GTAGAGTTAAGAAGCTGTTGTACATTTATGATTTAATAAAATAATTCTAAAGGAAATTGTGTAATTATAGACTT 2115
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2116 TTTATTTTAAATAAGTTAAGGAGTGGGTAGTATAATTAAGGTCCATTGCAAAGCTGTTGTTGTATTTGTGTAAG 2189
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2190 ATAAAAATGCTGGTCAGATTTAAGTGTGTTGTCTGAAATTCATCAGGAATAAATTACCTAGTTAACTTAAGGGA 2263
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2264 TATCTCTGCAAAGAGAAACACCTTTTTAGATCTTTTAGATGCTGCTTCTTCAATGCAAGGAAAGGAAATAACCC 2337
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2338 CAGCGAGGTACTCTTCAGGGACACAGGTCTAGTACAAGAGAACTCTTGACGACTAATCGCAGCCAGTCTTAAAA 2411
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2412 AACTGTGCTGTATCTACAAAGCTTTAACTACAGTAGTTGATAAGGATGCCAACGAAAGCTGAGGGTGTAGAGCA 2485
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2486 AAGTAGTTCTAAGCTTCAGTTAAACTTCTTTAGGTAAGAACTTATTTACTTTTTCTTTCTTAATTTTCCTCCCT 2559
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2560 TAAAAGATAAACTAATAAACTCTTCAATGGTCTTTTCAGTATAGTTCTTATGTAGTTTAACATAGCTTATAAAT 2633
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2634 TGAGTTTAACAATAAACTCAAGATAATTTTATAAACCCTGTTTTCCAATCTGTCATTTACTTAAATTATTTTGG 2707
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2708 TTGTTTTCCCTTTTTTTCCTTCTTTCTCACCCCCTCCCTTTCCATGAAGATTCAGGTGCTTAACATATCATTTT 2781
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2782 TTTCCCTGCTGGAATTTTAGCATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACTGTAAAGTG 2855
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2856 CTTCATTTCAACAGCTGAGGCAAGCCAAGTGATCATTAATAAAGCTTTTCTTGCTTCCTTCAGTGGTGTTGGTA 2929
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2930 GTAAAATGGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAAGAA 3003
Query 748 -------------------------------------------------------------------------- 747
Sbjct 3004 ATTCTGTACCATCTGAAAGTAGTTCTTGTTGGTGCCTTCATTTAAGAAGCACTTTTAAGAAAAGGGAATGTTTT 3077
Query 748 -------------------------------------------------------------------------- 747
Sbjct 3078 CTGATTTAAAACTTCATTTAGTACAGGTTCTTAATAAAATTACAAAAATGCTGATTGTAAAGGGTAACATCAAA 3151
Query 748 -------------------------------------------------------------------------- 747
Sbjct 3152 TTAGCAAAGGATAATGTATTGTTTTAGGATTTGTGAGTAGACAGATAAGAGCTCTATTTTAAATACAAGTTTTA 3225
Query 748 ------------------------- 747
Sbjct 3226 TAAAATAAATACTTTTGTATCCAAA 3250
