Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_10957
• Subject: XM_011535834.3
• Aligned Length: 1350
• Identities: 1032
• Gaps: 318

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAAAATTTGACCAACTTCTATGAGGGGCTGCAGCCAGCGGTCTGTCGCGCGTGCCTGTGTGCCCGAGGAGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGCCCCGGGGAGAAGACCCGGCGCGGAGTTGTTCCCCCAGGGAGGATCCGCAGCCCAGCCGAGGGGGTCGGGCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCTGGCTACGCAGGACCCAGCCCCGCAGCCGCGGACTCCCAGCGGCGGCGAAGTTTGGCTGCTGAGCGGCGCG  222

Query    1  ---------------------------ATGCCCGTGGGGGGCCTGTTGCCGCTCTTCAGCAGCCCCGCGGGCGG  47
                                       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCGCCGGACCACTGGACAGCGGGAGCGATGCCCGTGGGGGGCCTGTTGCCGCTCTTCAGCAGCCCCGCGGGCGG  296

Query   48  CGTCCTGGGCGGGGGGCTCGGCGGCGGCGGTGGCAGGAAGGGGTCGGGCCCCGCCGCCCTCCGCCTGACGGAGA  121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CGTCCTGGGCGGGGGGCTCGGCGGCGGCGGTGGCAGGAAGGGGTCGGGCCCCGCCGCCCTCCGCCTGACGGAGA  370

Query  122  AGTTCGTGCTGCTGCTGGTATTCAGCGCCTTCATCACGCTCTGCTTCGGGGCGATCTTCTTCCTGCCAGACTCC  195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGTTCGTGCTGCTGCTGGTATTCAGCGCCTTCATCACGCTCTGCTTCGGGGCGATCTTCTTCCTGCCAGACTCC  444

Query  196  TCCAAGCTGCTCAGCGGGGTCCTGTTCCACTCCAGCCCCGCCTTGCAGCCGGCCGCCGACCACAAGCCCGGGCC  269
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TCCAAGCTGCTCAGCGGGGTCCTGTTCCACTCCAGCCCCGCCTTGCAGCCGGCCGCCGACCACAAGCCCGGGCC  518

Query  270  CGGGGCGCGCGCCGAGGACGCGGCCGAGGGGCGAGCCCGGCGCCGCGAGGAGGGGGCACCCGGGGACCCGGAGG  343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CGGGGCGCGCGCCGAGGACGCGGCCGAGGGGCGAGCCCGGCGCCGCGAGGAGGGGGCACCCGGGGACCCGGAGG  592

Query  344  CCGCCCTGGAGGACAACTTGGCCAGGATCCGCGAAAACCACGAGCGGGCTCTCAGGGAAGCCAAGGAGACCCTG  417
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCGCCCTGGAGGACAACTTGGCCAGGATCCGCGAAAACCACGAGCGGGCTCTCAGGGAAGCCAAGGAGACCCTG  666

Query  418  CAGAAGCTGCCCGAGGAGATCCAAAGAGACATCCTACTGGAGAAGAAGAAGGTGGCCCAGGACCAGCTGCGTGA  491
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CAGAAGCTGCCCGAGGAGATCCAAAGAGACATCCTACTGGAGAAGAAGAAGGTGGCCCAGGACCAGCTGCGTGA  740

Query  492  CAAGGCGCCGTTCAGAGGCCTGCCCCCGGTGGACTTCGTGCCCCCAATCGGGGTGGAGAGCCGGGAGCCCGCCG  565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CAAGGCGCCGTTCAGAGGCCTGCCCCCGGTGGACTTCGTGCCCCCAATCGGGGTGGAGAGCCGGGAGCCCGCCG  814

Query  566  ACGCCGCCATCCGCGAGAAAAGGGCAAAGATCAAAGAGGAAATTGAAGCCAGGAAGGGGCAAGCAAATTGCCCA  639
            ||||||||||||||||||||||||||||||||||||                                      
Sbjct  815  ACGCCGCCATCCGCGAGAAAAGGGCAAAGATCAAAG--------------------------------------  850

Query  640  GGGTCGAGCAGCTCCTGCGAGGTTGAAATCCAGATGATGAAACATGCTTGGAATAATTATAAAGGTTATGCCTG  713
                                           |||||||||||||||||||||||||||||||||||||||||||
Sbjct  851  -------------------------------AGATGATGAAACATGCTTGGAATAATTATAAAGGTTATGCCTG  893

Query  714  GGGATTAAATGAACTCAAACCTATATCAAAAGGAGGCCATTCAAGCAGTTTGTTTGGTAACATCAAAGGAGCAA  787
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  894  GGGATTAAATGAACTCAAACCTATATCAAAAGGAGGCCATTCAAGCAGTTTGTTTGGTAACATCAAAGGAGCAA  967

Query  788  CTATAGTAGATGCCCTGGATACACTTTTTATTATGGAAATGAAACATGAATTTGAAGAAGCAAAATCATGGGTT  861
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  968  CTATAGTAGATGCCCTGGATACACTTTTTATTATGGAAATGAAACATGAATTTGAAGAAGCAAAATCATGGGTT  1041

Query  862  GAAGAAAATTTAGATTTTAATGTGAATGCTGAAATTTCTGTCTTTGAAGTAAATATACGCTTTGTTGGTGGACT  935
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1042  GAAGAAAATTTAGATTTTAATGTGAATGCTGAAATTTCTGTCTTTGAAGTAAATATACGCTTTGTTGGTGGACT  1115

Query  936  ACTCTCAGCCTACTATCTGTCTGGAGAAGAGATTTTTCGAAAGAAAGCAGTGGAACTTGGGGTAAAATTGCTAC  1009
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1116  ACTCTCAGCCTACTATCTGTCTGGAGAAGAGATTTTTCGAAAGAAAGCAGTGGAACTTGGGGTAAAATTGCTAC  1189

Query 1010  CTGCATTTCATACTCCCTCTGGAATACCTTGGGCATTGCTGAATATGAAAAGGTGGATGTGCAATATCCCAAGG  1083
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1190  CTGCATTTCATACTCCCTCTGGAATACCTTGGGCATTGCTGAATATGAAAAGGTGGATGTGCAATATCCCAAGG  1263

Query 1084  GCTATGGAGGCTACCATA  1101
            ||||||||||||||||||
Sbjct 1264  GCTATGGAGGCTACCATA  1281