Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11036
- Subject:
- NM_002673.5
- Aligned Length:
- 6406
- Identities:
- 248
- Gaps:
- 6155
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCTGCTCTGGGCCCAGCTCTTCTCCAGGCTCTCTGGGCCGGGTGGGTCCTCACCCTCCAGCCCCTTCCACC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACTGCATTCACTCCCAATGGCACGTATCTGCAGCACCTGGCAAGGGACCCCACCTCAGGCACCCTCTACCTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGCTACCAACTTCCTGTTCCAGCTGAGCCCTGGGCTGCAGCTGGAGGCCACAGTGTCCACCGGCCCTGTGCTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACAGCAGGGACTGCCTGCCACCTGTGATGCCTGATGAGTGCCCCCAGGCCCAGCCTACCAACAACCCGAATCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGCTCCTGGTGAGCCCAGGGGCCCTGGTGGTATGCGGGAGCGTGCACCAGGGGGTCTGTGAACAGCGGCGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGGGCAGCTCGAGCAGCTGCTGCTGCGGCCAGAGCGGCCTGGGGACACACAATATGTGGCTGCCAATGATCCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCGGTCAGCACGGTGGGGCTGGTAGCCCAGGGCTTGGCAGGGGAGCCCCTCCTGTTTGTGGGGCGAGGATACAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGCAGGGGTGTGGGGGGTGGCATTCCACCCATCACAACCCGGGCCCTGTGGCCGCCCGACCCCCAAGCTGCCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTCCTATGAGGAGACAGCCAAGCTGGCAGTGGGCCGCCTCTCCGAGTACAGCCACCACTTCGTGAGTGCCTTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCACGTGGGGCCAGCGCCTACTTCCTGTTCCTGCGGCGGGACCTGCAGGCTCAGTCTAGAGCTTTTCGTGCCTA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGTATCTCGAGTGTGTCTCCGGGACCAGCACTACTACTCCTATGTGGAGTTGCCTCTGGCCTGCGAAGGTGGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTACGGGCTGATCCAGGCTGCAGCTGTGGCCACGTCCAGGGAGGTGGCGCATGGGGAGGTGCTCTTTGCAGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCTCCTCGGCTGCACCCCCCACTGTGGGCCGGCCCCCATCGGCGGCTGCTGGGGCATCTGGAGCCTCTGCCCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTGTGCCTTCCCCCTGGATGAGGTGGACCGGCTTGCTAATCGCACGCGAGATGCCTGCTACACCCGGGAGGGTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTGCTGAGGATGGGACCGAGGTGGCCTACATCGAGTATGATGTCAATTCTGACTGTGCACAGCTGCCAGTGGAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACCCTGGATGCTTATCCCTGTGGCTCAGACCACACGCCCAGCCCCATGGCCAGCCGGGTCCCGCTGGAAGCCAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACCAATTCTGGAGTGGCCAGGGATTCAGCTAACAGCTGTGGCAGTCACCATGGAAGATGGACACACCATCGCTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCTGGGTGATAGTCAAGGGCAGCTGCACAGGGTCTACTTGGGCCCAGGGAGCGATGGCCACCCATACTCCACA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGAGCATCCAGCAGGGGTCTGCAGTGAGCAGAGACCTCACCTTTGATGGGACCTTTGAGCACCTGTATGTCAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GACCCAGAGCACACTTCTGAAGGTTCCTGTGGCTTCCTGTGCTCAGCACCTGGACTGTGCATCTTGCCTTGCTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACAGGGACCCATACTGTGGGTGGTGCGTGCTCCTTGGCAGGTGCAGTCGCCGTTCTGAGTGCTCGAGGGGCCAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGCCCAGAGCAGTGGCTATGGAGCTTCCAGCCTGAGCTGGGCTGTCTGCAAGTGGCAGCCATGAGTCCTGCCAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CATCAGCCGAGAGGAGACGAGGGAGGTTTTCCTATCAGTGCCAGACCTGCCACCCCTGTGGCCAGGGGAGTCAT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATTCCTGCCACTTTGGGGAACATCAGAGTCCTGCCCTGCTGACTGGTTCTGGTGTGATGTGCCCCTCCCCAGAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCTAGTGAGGCCCCAGTGCTGCCGAGAGGAGCCGACTACGTATCCGTGAGCGTGGAGCTCAGATTTGGCGCTGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGTGATCGCCAAAACTTCCCTCTCTTTCTATGACTGTGTGGCGGTCACTGAACTCCGCCCATCTGCGCAGTGCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGGCCTGTGTGAGCAGCCGCTGGGGGTGTAACTGGTGTGTCTGGCAGCACCTGTGCACCCACAAGGCCTCGTGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GATGCTGGGCCCATGGTTGCAAGCCATCAGAGCCCGCTTGTCTCCCCAGACCCTCCTGCAAGAGGTGGACCCAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCCCTCCCCACCCACAGCCCCCAAAGCCCTGGCCACCCCTGCTCCTGACACCCTTCCCGTGGAGCCTGGGGCTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCTCCACAGCCACAGCTTCGGACATCTCACCTGGGGCTAGTCCTTCCCTGCTCAGCCCCTGGGGGCCATGGGCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGTTCTGGCTCCATATCTTCCCCTGGCTCCACAGGGTCGCCTCTCCATGAGGAGCCCTCCCCTCCCAGCCCCCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AAATGGACCTGGAACCGCTGTCCCTGCCCCCACTGACTTCAGACCCTCAGCCACACCTGAGGACCTCTTGGCCT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CCCCGCTGTCACCCTCAGAGGTAGCAGCAGTGCCCCCTGCAGACCCTGGCCCCGAGGCTCTTCATCCCACAGTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCCCTGGACCTGCCCCCTGCCACTGTTCCTGCCACCACTTTCCCAGGGGCCATGGGCTCCGTGAAGCCCGCCCT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGACTGGCTCACGAGAGAAGGCGGCGAGCTGCCCGAGGCGGACGAGTGGACGGGGGGTGACGCACCCGCCTTCT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCACTTCCACCCTCCTCTCAGGTGATGGAGACTCAGCAGAGCTTGAGGGCCCTCCCGCCCCCCTCATCCTCCCG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TCCAGCCTCGACTACCAGTATGACACCCCCGGGCTCTGGGAGCTGGAAGAGGCGACCTTGGGGGCAAGCTCCTG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CCCCTGTGTGGAGAGCGTTCAGGGCTCCACGTTGATGCCGGTCCATGTGGAGCGGGAAATCCGGCTGCTAGGCA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GGAACCTGCACCTTTTCCAGGATGGCCCAGGAGACAATGAGTGTGTGATGGAGCTGGAGGGCCTCGAGGTGGTG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTTGAGGCCCGGGTCGAGTGTGAGCCACCTCCAGATACCCAGTGCCATGTCACCTGCCAGCAGCACCAGCTCAG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CTATGAGGCTCTGCAGCCGGAGCTCCGTGTGGGGCTGTTTCTGCGTCGGGCCGGCCGTCTGCGTGTGGACAGTG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTGAGGGGCTGCATGTGGTACTGTATGACTGTTCCGTGGGACATGGAGACTGCAGCCGCTGCCAAACTGCCATG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CCCCAGTATGGCTGTGTGTGGTGTGAGGGGGAGCGTCCACGTTGTGTGACCCGGGAGGCCTGTGGTGAGGCTGA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GGCTGTGGCCACCCAGTGCCCAGCGCCCCTCATCCACTCGGTGGAGCCACTGACTGGGCCTGTAGACGGAGGCA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CCCGTGTCACCATCAGGGGCTCCAACCTGGGCCAGCATGTGCAGGATGTGCTGGGCATGGTCACGGTGGCTGGA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GTGCCCTGTGCTGTGGATGCCCAGGAGTACGAGGTCTCCAGCAGCCTCGTGTGCATCACCGGGGCCAGTGGGGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GGAGGTGGCCGGCGCCACAGCGGTGGAGGTGCCGGGAAGAGGACGTGGTGTCTCAGAACACGACTTTGCCTACC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGGATCCGAAGGTCCATTCCATCTTCCCGGCCCGCGGCCCCAGAGCTGGGGGCACCCGTCTCACCCTGAATGGC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TCCAAGCTCCTGACTGGGCGGCTGGAGGACATCCGAGTGGTGGTTGGAGACCAGCCTTGTCACTTGCTGCCGGA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GCAGCAGTCAGAACAACTGCGGTGTGAGACCAGCCCACGCCCCACGCCTGCCACGCTCCCTGTGGCTGTGTGGT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TTGGGGCCACGGAGCGGAGGCTTCAACGCGGACAGTTCAAGTATACCTTGGACCCCAACATCACCTCTGCTGGC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CCCACCAAGAGCTTCCTCAGTGGAGGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 AAGAATCCGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CGGAGACGGCATGTTCCCTTGGACCCTCCTGCAGTAGCCAGCAATTTGAGGAGCCGTGCCATGTCAACTCCTCC 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CAGCTCATCACGTGCCGCACACCTGCCCTCCCAGGCCTGCCTGAGGACCCCTGGGTCCGGGTGGAATTTATCCT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 TGACAACCTGGTCTTTGACTTTGCAACACTGAACCCCACACCTTTCTCCTATGAGGCCGACCCCACCCTGCAGC 4144
Query 1 -----------------------ATGCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAAC 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145 CACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAAC 4218
Query 52 CTGGACCTTGCAATGTCCAAGGAGGAGGTGGTGGCTATGATAGGGGATGGCCCCTGTGTGGTGAAGACGCTGAC 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4219 CTGGACCTTGCAATGTCCAAGGAGGAGGTGGTGGCTATGATAGGGGATGGCCCCTGTGTGGTGAAGACGCTGAC 4292
Query 126 GCGGCACCACCTGTACTGCGAGCCCCCCGTGGAGCAGCCCCTGCCACGGCACCATGCCCTCCGAGAGGCACCTG 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4293 GCGGCACCACCTGTACTGCGAGCCCCCCGTGGAGCAGCCCCTGCCACGGCACCATGCCCTCCGAGAGGCACCTG 4366
Query 200 ACTCTTTGCCTGAGTTCACGGT-CAG-TGGGCA-----------------GGT--------------------- 233
|||||||||||||||||||||| ||| ||||.| |||
Sbjct 4367 ACTCTTTGCCTGAGTTCACGGTGCAGATGGGGAACTTGCGCTTCTCCCTGGGTCACGTGCAGTATGACGGCGAG 4440
Query 234 --CCCTGG------------------CCGGGCTGGGCAT----------------------------------- 252
|||||| ||.|| |||||.|
Sbjct 4441 AGCCCTGGGGCTTTTCCTGTGGCAGCCCAGG-TGGGCTTGGGGGTGGGCACCTCTCTTCTGGCTCTGGGTGTCA 4513
Query 253 -------------------------------------------------------------------------- 252
Sbjct 4514 TCATCATTGTCCTCATGTACAGGAGGAAGAGCAAGCAGGCCCTGAGGGACTATAAGAAGGTTCAGATCCAGCTG 4587
Query 253 -------------------------------------------------------------------------- 252
Sbjct 4588 GAGAATCTGGAGAGCAGTGTGCGGGACCGCTGCAAGAAGGAATTCACAGACCTCATGACTGAGATGACCGATCT 4661
Query 253 -------------------------------------------------------------------------- 252
Sbjct 4662 CACCAGTGACCTCCTGGGCAGCGGCATCCCCTTCCTCGACTACAAGGTGTATGCGGAGAGGATCTTCTTCCCTG 4735
Query 253 -------------------------------------------------------------------------- 252
Sbjct 4736 GGCACCGCGAGTCGCCCTTGCACCGGGACCTGGGTGTGCCTGAGAGCAGACGGCCCACTGTGGAGCAAGGGCTG 4809
Query 253 -------------------------------------------------------------------------- 252
Sbjct 4810 GGGCAGCTCTCTAACCTGCTCAACAGCAAGCTCTTCCTCACCAAGTTCATCCACACGCTGGAGAGCCAGCGCAC 4883
Query 253 -------------------------------------------------------------------------- 252
Sbjct 4884 CTTTTCAGCTCGGGACCGTGCCTACGTGGCATCTCTGCTCACCGTGGCACTGCATGGGAAGCTTGAGTATTTCA 4957
Query 253 -------------------------------------------------------------------------- 252
Sbjct 4958 CTGACATCCTCCGCACTCTGCTCAGTGACCTGGTTGCCCAGTATGTGGCCAAGAACCCCAAGCTGATGCTGCGC 5031
Query 253 -------------------------------------------------------------------------- 252
Sbjct 5032 AGGACAGAGACTGTGGTGGAGAAGCTGCTCACCAACTGGATGTCCATCTGTCTGTATACCTTCGTGAGGGACTC 5105
Query 253 -------------------------------------------------------------------------- 252
Sbjct 5106 CGTAGGGGAGCCTCTGTACATGCTCTTTCGAGGGATTAAGCACCAAGTGGATAAGGGGCCAGTGGACAGTGTGA 5179
Query 253 -------------------------------------------------------------------------- 252
Sbjct 5180 CAGGCAAGGCCAAATACACCTTGAACGACAACCGCCTGCTCAGAGAGGATGTGGAGTACCGTCCCCTGACCTTG 5253
Query 253 -------------------------------------------------------------------------- 252
Sbjct 5254 AATGCACTATTGGCTGTGGGGCCTGGGGCAGGAGAGGCCCAGGGCGTGCCCGTGAAGGTCCTAGACTGTGACAC 5327
Query 253 -------------------------------------------------------------------------- 252
Sbjct 5328 CATCTCCCAGGCAAAGGAGAAGATGCTGGACCAGCTTTATAAAGGAGTGCCTCTCACCCAGCGGCCAGACCCTC 5401
Query 253 -------------------------------------------------------------------------- 252
Sbjct 5402 GCACCCTTGATGTTGAGTGGCGGTCTGGGGTGGCCGGGCACCTCATTCTTTCTGACGAGGATGTCACTTCTGAG 5475
Query 253 -------------------------------------------------------------------------- 252
Sbjct 5476 GTCCAGGGTCTGTGGAGGCGCCTGAACACACTGCAGCATTACAAGGTCCCAGATGGAGCAACTGTGGCCCTCGT 5549
Query 253 -------------------------------------------------------------------------- 252
Sbjct 5550 CCCCTGCCTCACCAAGCATGTGCTCCGGGAAAACCAGGATTATGTCCCTGGAGAGCGGACCCCAATGCTGGAGG 5623
Query 253 -------------------------------------------------------------------------- 252
Sbjct 5624 ATGTAGATGAGGGGGGCATCCGGCCCTGGCACCTGGTGAAGCCAAGTGATGAGCCGGAGCCGCCCAGGCCTCGG 5697
Query 253 -------------------------------------------------------------------------- 252
Sbjct 5698 AGGGGCAGCCTTCGGGGCGGGGAGCGTGAGCGCGCCAAGGCCATCCCTGAGATCTACCTGACCCGCCTGCTGTC 5771
Query 253 -------------------------------------------------------------------------- 252
Sbjct 5772 CATGAAGGGCACCCTGCAGAAGTTCGTGGATGACCTGTTCCAGGTGATTCTCAGCACCAGCCGCCCCGTGCCGC 5845
Query 253 -------------------------------------------------------------------------- 252
Sbjct 5846 TCGCTGTGAAGTACTTCTTTGACCTGCTGGATGAGCAGGCCCAGCAGCATGGCATCTCCGACCAGGACACCATC 5919
Query 253 -------------------------------------------------------------------------- 252
Sbjct 5920 CACATCTGGAAGACCAACAGCTTGCCTCTGAGGTTCTGGATCAATATAATAAAAAACCCGCAGTTTGTGTTCGA 5993
Query 253 -------------------------------------------------------------------------- 252
Sbjct 5994 CGTGCAAACATCTGATAACATGGATGCGGTGCTCCTTGTCATTGCACAGACCTTCATGGACGCCTGCACCCTGG 6067
Query 253 -------------------------------------------------------------------------- 252
Sbjct 6068 CCGACCACAAGCTGGGCCGGGACTCCCCGATCAACAAACTTCTGTATGCACGGGACATTCCCCGGTACAAGCGG 6141
Query 253 -------------------------------------------------------------------------- 252
Sbjct 6142 ATGGTGGAAAGGTACTATGCAGACATCAGACAGACTGTCCCAGCCAGCGACCAAGAGATGAACTCTGTCCTGGC 6215
Query 253 -------------------------------------------------------------------------- 252
Sbjct 6216 TGAACTGTCCTGGAACTACTCCGGAGACCTCGGGGCGCGAGTGGCCCTGCATGAACTCTACAAGTACATCAACA 6289
Query 253 -------------------------------------------------------------------------- 252
Sbjct 6290 AGTACTATGACCAGATCATCACTGCCCTGGAGGAGGATGGCACGGCCCAGAAGATGCAGCTGGGCTATCGGCTC 6363
Query 253 ------------------------------------------ 252
Sbjct 6364 CAGCAGATTGCAGCTGCTGTGGAAAACAAGGTCACAGATCTA 6405
