Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11038
- Subject:
- NM_001128144.2
- Aligned Length:
- 2312
- Identities:
- 478
- Gaps:
- 1816
Alignment
Query 1 ATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTTTCAAGTTCTCAGATCATCACTTCGGTGGTCAGTGTTGT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTTTCAAGTTCTCAGATCATCACTTCGGTGGTCAGTGTTGT 74
Query 75 AAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGCCACAAGCGTAGATGTTAAACTGGAGAACTATGGATTTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGCCACAAGCGTAGATGTTAAACTGGAGAACTATGGATTTG 148
Query 149 ATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCAAGGCTGTTGATGCACCTGTAATGGCAATGAAGTACTAC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCAAGGCTGTTGATGCACCTGTAATGGCAATGAAGTACTAC 222
Query 223 ACCTCAAAAATAAATAGTCATGAAGATCTTGAAAATTTGACAACTTACGGTTTTCGTGGAGAAGCCTTGGGGTC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACCTCAAAAATAAATAGTCATGAAGATCTTGAAAATTTGACAACTTACGGTTTTCGTGGAGAAGCCTTGGGGTC 296
Query 297 AATTTGTTGTATAGCTGAGGTTTTAATTACAACAAGAACGGCTGCTGATAATTTTAGCACCCAGTATGTTTTAG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AATTTGTTGTATAGCTGAGGTTTTAATTACAACAAGAACGGCTGCTGATAATTTTAGCACCCAGTATGTTTTAG 370
Query 371 ATGGCAGTGGCCACATACTTTCTCAGAAACCTTCACATCTTGGTCAAG-------------------------- 418
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGGCAGTGGCCACATACTTTCTCAGAAACCTTCACATCTTGGTCAAGGTACAACTGTAACTGCTTTAAGATTA 444
Query 419 ---------------GTAAGAAAGTAGCTT------------------TGTA----------TACAAACAT--- 446
|||||||||.||.|| |||| .|.|||.||
Sbjct 445 TTTAAGAATCTACCTGTAAGAAAGCAGTTTTACTCAACTGCAAAAAAATGTAAAGATGAAATAAAAAAGATCCA 518
Query 447 --------TCTTTACCTTT------------TCTGTCTTA---ATTGTTGGTTTAAAAAAAAAAA---AGTTAC 494
||.|.|.|||| .|||.|||| ||||| .|||..|.|.||.|| |||||.
Sbjct 519 AGATCTCCTCATGAGCTTTGGTATCCTTAAACCTGACTTAAGGATTGT--CTTTGTACATAACAAGGCAGTTAT 590
Query 495 TCGG---------------------------------------------------------------------- 498
|.||
Sbjct 591 TTGGCAGAAAAGCAGAGTATCAGATCACAAGATGGCTCTCATGTCAGTTCTGGGGACTGCTGTTATGAACAATA 664
Query 499 -------------------------------------------------------------------------- 498
Sbjct 665 TGGAATCCTTTCAGTACCACTCTGAAGAATCTCAGATTTATCTCAGTGGATTTCTTCCAAAGTGTGATGCAGAC 738
Query 499 -------------------------------------------------------------------------- 498
Sbjct 739 CACTCTTTCACTAGTCTTTCAACACCAGAAAGAAGTTTCATCTTCATAAACAGTCGACCAGTACATCAAAAAGA 812
Query 499 -------------------------------------------------------------------------- 498
Sbjct 813 TATCTTAAAGTTAATCCGACATCATTACAATCTGAAATGCCTAAAGGAATCTACTCGTTTGTATCCTGTTTTCT 886
Query 499 -------------------------------------------------------------------------- 498
Sbjct 887 TTCTGAAAATCGATGTTCCTACAGCTGATGTTGATGTAAATTTAACACCAGATAAAAGCCAAGTATTATTACAA 960
Query 499 -------------------------------------------------------------------------- 498
Sbjct 961 AATAAGGAATCTGTTTTAATTGCTCTTGAAAATCTGATGACGACTTGTTATGGACCATTACCTAGTACAAATTC 1034
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1035 TTATGAAAATAATAAAACAGATGTTTCCGCAGCTGACATCGTTCTTAGTAAAACAGCAGAAACAGATGTGCTTT 1108
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1109 TTAATAAAGTGGAATCATCTGGAAAGAATTATTCAAATGTTGATACTTCAGTCATTCCATTCCAAAATGATATG 1182
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1183 CATAATGATGAATCTGGAAAAAACACTGATGATTGTTTAAATCACCAGATAAGTATTGGTGACTTTGGTTATGG 1256
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1257 TCATTGTAGTAGTGAAATTTCTAACATTGATAAAAACACTAAGAATGCATTTCAGGACATTTCAATGAGTAATG 1330
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1331 TATCATGGGAGAACTCTCAGACGGAATATAGTAAAACTTGTTTTATAAGTTCCGTTAAGCACACCCAGTCAGAA 1404
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1405 AATGGCAATAAAGACCATATAGATGAGAGTGGGGAAAATGAGGAAGAAGCAGGTCTTGAAAACTCTTCGGAAAT 1478
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1479 TTCTGCAGATGAGTGGAGCAGGGGAAATATACTTAAAAATTCAGTGGGAGAGAATATTGAACCTGTGAAAATTT 1552
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1553 TAGTGCCTGAAAAAAGTTTACCATGTAAAGTAAGTAATAATAATTATCCAATCCCTGAACAAATGAATCTTAAT 1626
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1627 GAAGATTCATGTAACAAAAAATCAAATGTAATAGATAATAAATCTGGAAAAGTTACAGCTTATGATTTACTTAG 1700
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1701 CAATCGAGTAATCAAGAAACCCATGTCAGCAAGTGCTCTTTTTGTTCAAGATCATCGTCCTCAGTTTCTCATAG 1774
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1775 AAAATCCTAAGACTAGTTTAGAGGATGCAACACTACAAATTGAAGAACTGTGGAAGACATTGAGTGAAGAGGAA 1848
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1849 AAACTGAATCTTTTTAATGGATCTCATTATTTAGACGTTTTATATAAAATGACAGCAGATGACCAAAGATACAG 1922
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1923 TGGATCAACTTACCTGTCTGATCCTCGTCTTACAGCGAATGGTTTCAAGATAAAATTGATACCAGGAGTTTCAA 1996
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1997 TTACTGAAAATTACTTGGAAATAGAAGGAATGGCTAATTGTCTCCCATTCTATGGAGTAGCAGATTTAAAAGAA 2070
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2071 ATTCTTAATGCTATATTAAACAGAAATGCAAAGGAAGTTTATGAATGTAGACCTCGCAAAGTGATAAGTTATTT 2144
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2145 AGAGGGAGAAGCAGTGCGTCTATCCAGACAATTACCCATGTACTTATCAAAAGAGGACATCCAAGACATTATCT 2218
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2219 ACAGAATGAAGCACCAGTTTGGAAATGAAATTAAAGAGTGTGTTCATGGTCGCCCATTTTTTCATCATTTAACC 2292
Query 499 ------------------ 498
Sbjct 2293 TATCTTCCAGAAACTACA 2310
