Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11039
- Subject:
- NM_001321049.2
- Aligned Length:
- 2030
- Identities:
- 497
- Gaps:
- 1510
Alignment
Query 1 ATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTTTCAAGTTCTCAGATCATCACTTCGGTGGTCAGTGTTGT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTTTCAAGTTCTCAGATCATCACTTCGGTGGTCAGTGTTGT 74
Query 75 AAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGCCACAAGCGTAGATGTTAAACTGGAGAACTATGGATTTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGCCACAAGCGTAGATGTTAAACTGGAGAACTATGGATTTG 148
Query 149 ATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCAAGGCTGTTGATGCACCTGTAATGGCAATGAAGTACTAC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCAAGGCTGTTGATGCACCTGTAATGGCAATGAAGTACTAC 222
Query 223 ACCTCAAAAATAAATAGTCATGAAGATCTTGAAAATTTGACAACTTACGGTTTTCGTGGAGAAGCCTTGGGGTC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACCTCAAAAATAAATAGTCATGAAGATCTTGAAAATTTGACAACTTACGGTTTTCGTGGAGAAGCCTTGGGGTC 296
Query 297 AATTTGTTGTATAGCTGAGGTTTTAATTACAACAAGAACGGCTGCTGATAATTTTAGCACCCAGTATGTTTTAG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AATTTGTTGTATAGCTGAGGTTTTAATTACAACAAGAACGGCTGCTGATAATTTTAGCACCCAGTATGTTTTAG 370
Query 371 ATGGCAGTGGCCACATACTTTCTCAGAAACCTTCACATCTTGGTCAAGGTACAACTGTAACTGCTTT------- 437
|||||||||||||||||||||||||||||||||||||||||||||||||||..|..||| |||||
Sbjct 371 ATGGCAGTGGCCACATACTTTCTCAGAAACCTTCACATCTTGGTCAAGGTAAGAAAGTA---GCTTTGTATACA 441
Query 438 AAGATTATTTAAGAATCTACCTGTAAGAAAGCAGTTTTACTCAACTGCAAAAAAATGTAAAGATG-----AAAT 506
||.|||.|| |||||.| .|.||.|| ||.||| || |||.
Sbjct 442 AACATTCTT--------TACCTTT------TCTGTCTT--------------AATTGT-----TGGTTTAAAAA 482
Query 507 AAAAAAG-----------ATCCAAGATCTCCTCATGAGCTTTGGTATCCTTAAACCTGACTTAAGGATTGTCTT 569
||||||| ||.||| ||.|..| ||||||| .|||...||||| |.||||.|.||
Sbjct 483 AAAAAAGTTACTCGGTGAATACAA-ATATATT-----GCTTTGG---GCTTGGTCCTGA-TAAAGGCTAGT--- 543
Query 570 TGTACATAACAAGGCAGTTATTTGGCAGAAAAGCAGAGTATCAGATCACAAGATGGCTCTCATGTCAGTTCTGG 643
Sbjct 544 -------------------------------------------------------------------------- 543
Query 644 GGACTGCTGTTATGAACAATATGGAATCCTTTCAGTACCACTCTGAAGAATCTCAGATTTATCTCAGTGGATTT 717
Sbjct 544 -------------------------------------------------------------------------- 543
Query 718 CTTCCAAAGTGTGATGCAGACCACTCTTTCACTAGTCTTTCAACACCAGAAAGAAGTTTCATCTTCATAAACAG 791
Sbjct 544 -------------------------------------------------------------------------- 543
Query 792 TCGACCAGTACATCAAAAAGATATCTTAAAGTTAATCCGACATCATTACAATCTGAAATGCCTAAAGGAATCTA 865
Sbjct 544 -------------------------------------------------------------------------- 543
Query 866 CTCGTTTGTATCCTGTTTTCTTTCTGAAAATCGATGTTCCTACAGCTGATGTTGATGTAAATTTAACACCAGAT 939
Sbjct 544 -------------------------------------------------------------------------- 543
Query 940 AAAAGCCAAGTATTATTACAAAATAAGGAATCTGTTTTAATTGCTCTTGAAAATCTGATGACGACTTGTTATGG 1013
Sbjct 544 -------------------------------------------------------------------------- 543
Query 1014 ACCATTACCTAGTACAAATTCTTATGAAAATAATAAAACAGATGTTTCCGCAGCTGACATCGTTCTTAGTAAAA 1087
Sbjct 544 -------------------------------------------------------------------------- 543
Query 1088 CAGCAGAAACAGATGTGCTTTTTAATAAAGTGGAATCATCTGGAAAGAATTATTCAAATGTTGATACTTCAGTC 1161
Sbjct 544 -------------------------------------------------------------------------- 543
Query 1162 ATTCCATTCCAAAATGATATGCATAATGATGAATCTGGAAAAAACACTGATGATTGTTTAAATCACCAGATAAG 1235
Sbjct 544 -------------------------------------------------------------------------- 543
Query 1236 TATTGGTGACTTTGGTTATGGTCATTGTAGTAGTGAAATTTCTAACATTGATAAAAACACTAAGAATGCATTTC 1309
Sbjct 544 -------------------------------------------------------------------------- 543
Query 1310 AGGACATTTCAATGAGTAATGTATCATGGGAGAACTCTCAGACGGAATATAGTAAAACTTGTTTTATAAGTTCC 1383
Sbjct 544 -------------------------------------------------------------------------- 543
Query 1384 GTTAAGCACACCCAGTCAGAAAATGGCAATAAAGACCATATAGATGAGAGTGGGGAAAATGAGGAAGAAGCAGG 1457
Sbjct 544 -------------------------------------------------------------------------- 543
Query 1458 TCTTGAAAACTCTTCGGAAATTTCTGCAGATGAGTGGAGCAGGGGAAATATACTTAAAAATTCAGTGGGAGAGA 1531
Sbjct 544 -------------------------------------------------------------------------- 543
Query 1532 ATATTGAACCTGTGAAAATTTTAGTGCCTGAAAAAAGTTTACCATGTAAAGTAAGTAATAATAATTATCCAATC 1605
Sbjct 544 -------------------------------------------------------------------------- 543
Query 1606 CCTGAACAAATGAATCTTAATGAAGATTCATGTAACAAAAAATCAAATGTAATAGATAATAAATCTGGAAAAGT 1679
Sbjct 544 -------------------------------------------------------------------------- 543
Query 1680 TACAGCTTATGATTTACTTAGCAATCGAGTAATCAAGAAACCCATGTCAGCAAGTGCTCTTTTTGTTCAAGATC 1753
Sbjct 544 -------------------------------------------------------------------------- 543
Query 1754 ATCGTCCTCAGTTTCTCATAGAAAATCCTAAGACTAGTTTAGAGGATGCAACACTACAAATTGAAGAACTGTGG 1827
Sbjct 544 -------------------------------------------------------------------------- 543
Query 1828 AAGACATTGAGTGAAGAGGAAAAACTGAATCTTTTTAATGGATCTCATTATTTAGACGTTTTATATAAAATGAC 1901
Sbjct 544 -------------------------------------------------------------------------- 543
Query 1902 AGCAGATGACCAAAGATACAGTGGATCAACTTACCTGTCTGATCCTCGTCTTACAGCGAATGGTTTCAAGATAA 1975
Sbjct 544 -------------------------------------------------------------------------- 543
Query 1976 AATTGATACCAGGAGTTTCAATTACTGAAAAT 2007
Sbjct 544 -------------------------------- 543