Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11047
- Subject:
- XM_006539652.3
- Aligned Length:
- 2092
- Identities:
- 1124
- Gaps:
- 899
Alignment
Query 1 ATGGTTCACTC-----CAGC-----------ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCG 58
|||| | |||| |||||.||..| |||||||||||||||||||||||||||||||
Sbjct 1 ATGG------CGAAGACAGCGGCGCCTACCGATGGGAGCAGC-GAAATAAGAATGTCTAAGCCCCTGGAGGCCG 67
Query 59 AGAAGCAAGGTCTGGACTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAAC 132
||||||||.|||||||||||||.||||||||||||||||||||||||||||||||.||||.|||.|||||||||
Sbjct 68 AGAAGCAAAGTCTGGACTCCCCGTCAGAGCACACAGACACCGAAAGAAATGGACCCGACATTAACCATCAGAAC 141
Query 133 CCCCAAAATAAGACCTCCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAAAGATCAAGGCTGAAGACCCCAG 206
|||||.|||||..|.|||||||||||.||||||||||||||||||||.||.|||||||||||||||||||||||
Sbjct 142 CCCCAGAATAAAGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGATCAAGGCTGAAGACCCCAG 215
Query 207 TGGCGATTCAGCCCCAGCAGCACCCCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGT 280
||||||||||||||||||||||||||.||||||.||||||||.||||||||||||||||||||||||||||||.
Sbjct 216 TGGCGATTCAGCCCCAGCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGCCCAACTCATGC 289
Query 281 TGACGGGCAGCCAGCTAGCTGG---------------------------------------------------- 302
||||||||||||||||||||||
Sbjct 290 TGACGGGCAGCCAGCTAGCTGGGCTCTCAGCACTGATACCTGCTCAGCAGCAACTCCTCCTTCAGCAAGCTCAG 363
Query 303 -------------------------------------------------------------------------- 302
Sbjct 364 GCCCAGCTGCTGGCCGCTGCCGTCCAGCAGTCCAGCGCCGCTGCCGCCAACGCTGCTGCTGCCGCCGCTGCCGC 437
Query 303 -------------------------------------------------------------------------- 302
Sbjct 438 CTCCACCTCCTCCTCCACCTCTTCCGCCTCCTCCTCCACCTCGCAGACCCCAGCCTCCTCTGGGGGAGGCGACC 511
Query 303 -------------------------------------------------------------------------- 302
Sbjct 512 TGCCACCATCACAGCCTACCAGCCAGCCCCCAGGGACCCCACAGCTCACCTTGTCCCAACCCATCCAGCTCACA 585
Query 303 -----GGACATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCAGCCACCTGC 371
||||||||||||.|||||||||||||||||||||||||||||.||.|||||||||||||||||||||||
Sbjct 586 GCACAGGACATACAGCAACTCCTCCAGCTCCAGCAGCTGGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGC 659
Query 372 TCAGTTCCTGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCCAGCTACCTC 445
||||||||||||.||.|||||.||||||||.|||||||||||||||||.||.||||||||||||||||||||||
Sbjct 660 TCAGTTCCTGCTGCCACAGGCACAGCAGAGTCAGCCAGGCCTGCTACCAACGCCAAATCTATTCCAGCTACCTC 733
Query 446 AGCAAACCCAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACA--------------------- 498
|.|||||||||||||||||.||||||||||||||||||||.||||||||.|||
Sbjct 734 AACAAACCCAGGGAGCTCTCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGGCTATGACTCGCCCCACG 807
Query 499 ---------------------------CAGCCCCCCAAATGCTTGGAGCCACCATCCCACCCCGAGGAGCCCAG 545
||||||||.||||||||||||||.||.||||||||.|||||||||||
Sbjct 808 CTGCCCGACCCACACCTCTCACACCCGCAGCCCCCGAAATGCTTGGAGCCGCCCTCCCACCCGGAGGAGCCCAG 881
Query 546 TGATCTGGAGGAGCTGGAGCAATTCGCCCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACGCAGGGTG 619
.|||||||||||||||||.||.||.||.||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 882 CGATCTGGAGGAGCTGGAACAGTTTGCTCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACACAGGGTG 955
Query 620 ATGTGGGCCTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAGACGACCATTTCCCGCTTCGAGGCCCTC 693
||||||||||||||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 956 ATGTGGGCCTGGCCATGGGCAAGCTCTATGGCAACGACTTCAGCCAAACGACCATTTCCCGCTTCGAGGCCCTC 1029
Query 694 AACCTGAGCTTCAAGAACATGTGCAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGATGCAGAGACTATGTC 767
|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1030 AACCTGAGCTTCAAGAACATGTGTAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGACGCAGAGACTATGTC 1103
Query 768 TGTGGACTCAAGCCTGCCCAGCCCCAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGCCTGCCCGGCCGGA 841
||||||.||||||||.||||||||.|||||||||||||||||||||||||||||||||||.|||||.||.||||
Sbjct 1104 TGTGGATTCAAGCCTACCCAGCCCAAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGGCTGCCGGGGCGGA 1177
Query 842 GACGCAAGAAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCGAACCAGAAG 915
||||||||||||||||||||||||||||.||.||||||||||||||||||||||||||.|||||||||||||||
Sbjct 1178 GACGCAAGAAGAGGACCAGCATCGAGACGAATGTCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCGAACCAGAAG 1251
Query 916 CCTACCTCAGAGGAGATCCTGCTGATCGCCGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTG 989
|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252 CCTACCTCAGAGGAGATCCTGCTGATCGCAGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTG 1325
Query 990 CAACCGGCGCCAGAAGGAGAAACGCATCAACCCCTGCAGTGCGGCCCCCATGCTGCCCAGCCCAGGGAAGCCGG 1063
|||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||.||||||.
Sbjct 1326 CAACCGGCGCCAGAAGGAGAAACGCATCAACCCTTGCAGTGCGGCCCCCATGCTGCCCAGCCCGGGAAAGCCGA 1399
Query 1064 CCAGCTACAGCCCCCATATGGTCACACCCCAAGGGGGCGCGGGGACCTTACCGTTGTCCCAAGCTTCCAGCAGT 1137
|||||||||||||.||..||||||||||||||||||||||.|||||||||||.||||||||||||||.||||||
Sbjct 1400 CCAGCTACAGCCCTCACCTGGTCACACCCCAAGGGGGCGCAGGGACCTTACCATTGTCCCAAGCTTCTAGCAGT 1473
Query 1138 CTGAGCA------------------------------------------------------------------- 1144
|||||||
Sbjct 1474 CTGAGCACAACAGTTACTACCTTATCCTCAGCTGTGGGGACGCTCCATCCCAGCCGGACAGCAGGAGGGGGTGG 1547
Query 1145 ---------------------------------------------------------------------CAACA 1149
|||||
Sbjct 1548 GGGTGGGGGCGGAGCTGCGCCCCCCCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCACCACCAACA 1621
Query 1150 GCACAAACCCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCAGGCC----------------------- 1200
||||||||||.||||||||||||||||||||||||||.||||||||.||||
Sbjct 1622 GCACAAACCCGAGCCCTCAAGGCAGCCACTCGGCTATTGGCTTGTCGGGCCTGAACCCCAGCGCGGGAAGCACA 1695
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1696 ATGGTGGGGTTGAGCTCTGGGCTGAGTCCAGCCCTCATGAGCAACAACCCTTTGGCCACTATCCAAGCCCTGGC 1769
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1770 CTCTGGTGGAACCCTGCCCCTTACCAGCCTTGATGGCAGCGGGAACCTGGTGCTGGGGGCAGCCGGTGCGGCCC 1843
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1844 CAGGGAGTCCCAGCTTAGTAACCTCGCCTCTCTTCTTGAACCACACCGGTCTGCCGCTGCTCAGTGCCCCACCA 1917
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1918 GGCGTGGGCCTGGTCTCAGCGGCGGCTGCAGCCGTAGCAGCATCCATCTCCAGCAAGTCTCCTGGCCTCTCCTC 1991
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1992 GTCTTCTTCATCCTCATCATCCTCCACGTGCAGTGATGTGGCAGCACAGACCCCTGGAGGCCCCGGAGGACCCG 2065
Query 1201 -------------------- 1200
Sbjct 2066 AGGCGGGGTCCAAGGCTGAG 2085
