Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11047
- Subject:
- XM_011527040.3
- Aligned Length:
- 1872
- Identities:
- 1200
- Gaps:
- 672
Alignment
Query 1 ATGGTTCACTCCAGCATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAGGTCTGGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGTTCACTCCAGCATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAGGTCTGGA 74
Query 75 CTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAACCCCCAAAATAAGACCT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAACCCCCAAAATAAGACCT 148
Query 149 CCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAA-------------------------------------- 184
||||||||||||||||||||||||||||||||||||
Sbjct 149 CCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAAAGGTGGGCATTCTCTCTGGCCTCCACTTAACATTCTGG 222
Query 185 ----------------------------AGATCAAGGCTGAAGACCCCAGTGGCGATTCAGCCCCAGCAGCACC 230
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGTCCCGGACCCTGCCTCTCTCCCCCCCAGATCAAGGCTGAAGACCCCAGTGGCGATTCAGCCCCAGCAGCACC 296
Query 231 CCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGCAGCCAGCTAGCTGGGG 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGCAGCCAGCTAGCTGGGG 370
Query 305 ACATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCAGCCACCTGCTCAGTTC 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCAGCCACCTGCTCAGTTC 444
Query 379 CTGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCCAGCTACCTCAGCAAAC 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCCAGCTACCTCAGCAAAC 518
Query 453 CCAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACA---------------------------- 498
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACACAGGCCGTGACCCGCCCTACGCTGCCCG 592
Query 499 --------------------CAGCCCCCCAAATGCTTGGAGCCACCATCCCACCCCGAGGAGCCCAGTGATCTG 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACCCGCACCTCTCGCACCCGCAGCCCCCCAAATGCTTGGAGCCACCATCCCACCCCGAGGAGCCCAGTGATCTG 666
Query 553 GAGGAGCTGGAGCAATTCGCCCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACGCAGGGTGATGTGGG 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAGGAGCTGGAGCAATTCGCCCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACGCAGGGTGATGTGGG 740
Query 627 CCTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAGACGACCATTTCCCGCTTCGAGGCCCTCAACCTGA 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAGACGACCATTTCCCGCTTCGAGGCCCTCAACCTGA 814
Query 701 GCTTCAAGAACATGTGCAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGATGCAGAGACTATGTCTGTGGAC 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCTTCAAGAACATGTGCAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGATGCAGAGACTATGTCTGTGGAC 888
Query 775 TCAAGCCTGCCCAGCCCCAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGCCTGCCCGGCCGGAGACGCAA 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCAAGCCTGCCCAGCCCCAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGCCTGCCCGGCCGGAGACGCAA 962
Query 849 GAAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCGAACCAGAAGCCTACCT 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCGAACCAGAAGCCTACCT 1036
Query 923 CAGAGGAGATCCTGCTGATCGCCGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGG 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAGAGGAGATCCTGCTGATCGCCGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGG 1110
Query 997 CGCCAGAAGGAGAAACGCATCAACCCCTGCAGTGCGGCCCCCATGCTGCCCAGCCCAGGGAAGCCGGCCAGCTA 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CGCCAGAAGGAGAAACGCATCAACCCCTGCAGTGCGGCCCCCATGCTGCCCAGCCCAGGGAAGCCGGCCAGCTA 1184
Query 1071 CAGCCCCCATATGGTCACACCCCAAGGGGGCGCGGGGACCTTACCGTTGTCCCAAGCTTCCAGCAGTCTGAGCA 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CAGCCCCCATATGGTCACACCCCAAGGGGGCGCGGGGACCTTACCGTTGTCCCAAGCTTCCAGCAGTCTGAGCA 1258
Query 1145 -------------------------------------------------------------------------- 1144
Sbjct 1259 CAACAGTTACTACCTTATCCTCAGCTGTGGGGACGCTCCACCCCAGCCGGACAGCTGGAGGGGGTGGGGGCGGG 1332
Query 1145 --------------------------------------------------------------CAACAGCACAAA 1156
||||||||||||
Sbjct 1333 GGCGGGGCTGCGCCCCCCCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCACCACCAACAGCACAAA 1406
Query 1157 CCCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCAGGCC------------------------------ 1200
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CCCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCAGGCCTGAACCCCAGCACGGGAAGCACAATGGTGG 1480
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1481 GGTTGAGCTCCGGGCTGAGTCCAGCCCTCATGAGCAACAACCCTTTGGCCACTATCCAAGCCCTGGCCTCTGGT 1554
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1555 GGAACCCTGCCCCTTACCAGCCTTGATGGCAGCGGGAATCTGGTGCTGGGGGCAGCCGGTGCAGCCCCGGGGAG 1628
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1629 CCCTGGCCTGGTGACCTCGCCGCTCTTCTTGAATCATGCTGGGCTGCCCCTGCTCAGCACCCCGCCTGGTGTGG 1702
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1703 GCCTGGTCTCAGCAGCGGCTGCGGCTGTGGCAGCCTCCATCTCCAGCAAGTCTCCTGGCCTCTCCTCCTCATCC 1776
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1777 TCTTCATCCTCATCCTCCTCCTCCTCCACTTGCAGCGAGACGGCAGCACAGACCCCTGGAGGTCCAGGGGGGCC 1850
Query 1201 ---------------------- 1200
Sbjct 1851 CGAGGCAGGGTCCAAACCTGAG 1872
