Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11047
- Subject:
- XM_017026884.2
- Aligned Length:
- 2169
- Identities:
- 1200
- Gaps:
- 969
Alignment
Query 1 ATGGTTCACTCCAGCATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAGGTCTGGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGTTCACTCCAGCATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAGGTCTGGA 74
Query 75 CTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAACCCCCAAAATAAGACCT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAACCCCCAAAATAAGACCT 148
Query 149 CCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAA-------------------------------------- 184
||||||||||||||||||||||||||||||||||||
Sbjct 149 CCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAAAGGTGGGCATTCTCTCTGGCCTCCACTTAACATTCTGG 222
Query 185 ----------------------------AGATCAAGGCTGAAGACCCCAGTGGCGATTCAGCCCCAGCAGCACC 230
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGTCCCGGACCCTGCCTCTCTCCCCCCCAGATCAAGGCTGAAGACCCCAGTGGCGATTCAGCCCCAGCAGCACC 296
Query 231 CCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGCAGCCAGCTAGCTGG-- 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGCAGCCAGCTAGCTGGGC 370
Query 303 -------------------------------------------------------------------------- 302
Sbjct 371 TCACGGCACTGATGCCAGCTCAGCAGCAGCTCCTCCTGCAGCAAGCCCAGGCCCAGCTCCTGGCCGCCGCCGTG 444
Query 303 -------------------------------------------------------------------------- 302
Sbjct 445 CAGCAGTCCAGTGCCGCCGCTGCCGCTAACGCCGCTGCCGCCGCCGCCGCCGCCTCCGCCTCCTCCTCTACTTC 518
Query 303 -------------------------------------------------------------------------- 302
Sbjct 519 CTCCTCCTCCTCCTCCTCTGCCTCCTCCTCGACCTCACAGCCCCCAGCCTCCTCTGGGGGGGGTGACCTGCCAC 592
Query 303 -------------------------------------------------------------------------G 303
|
Sbjct 593 CACCACAGCCTGCCAGCCAGCCCCCTGGGACCCCACAGCTCACCTTGTCCCAACCCATCCAGCTCACAGCACAG 666
Query 304 GACATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCAGCCACCTGCTCAGTT 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GACATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCAGCCACCTGCTCAGTT 740
Query 378 CCTGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCCAGCTACCTCAGCAAA 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCTGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCCAGCTACCTCAGCAAA 814
Query 452 CCCAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACA--------------------------- 498
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCCAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACACAGGCCGTGACCCGCCCTACGCTGCCC 888
Query 499 ---------------------CAGCCCCCCAAATGCTTGGAGCCACCATCCCACCCCGAGGAGCCCAGTGATCT 551
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GACCCGCACCTCTCGCACCCGCAGCCCCCCAAATGCTTGGAGCCACCATCCCACCCCGAGGAGCCCAGTGATCT 962
Query 552 GGAGGAGCTGGAGCAATTCGCCCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACGCAGGGTGATGTGG 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGAGGAGCTGGAGCAATTCGCCCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACGCAGGGTGATGTGG 1036
Query 626 GCCTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAGACGACCATTTCCCGCTTCGAGGCCCTCAACCTG 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCCTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAGACGACCATTTCCCGCTTCGAGGCCCTCAACCTG 1110
Query 700 AGCTTCAAGAACATGTGCAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGATGCAGAGACTATGTCTGTGGA 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGCTTCAAGAACATGTGCAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGATGCAGAGACTATGTCTGTGGA 1184
Query 774 CTCAAGCCTGCCCAGCCCCAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGCCTGCCCGGCCGGAGACGCA 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTCAAGCCTGCCCAGCCCCAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGCCTGCCCGGCCGGAGACGCA 1258
Query 848 AGAAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCGAACCAGAAGCCTACC 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGAAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCGAACCAGAAGCCTACC 1332
Query 922 TCAGAGGAGATCCTGCTGATCGCCGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTGCAACCG 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TCAGAGGAGATCCTGCTGATCGCCGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTGCAACCG 1406
Query 996 GCGCCAGAAGGAGAAACGCATCAACCCCTGCAGTGCGGCCCCCATGCTGCCCAGCCCAGGGAAGCCGGCCAGCT 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCGCCAGAAGGAGAAACGCATCAACCCCTGCAGTGCGGCCCCCATGCTGCCCAGCCCAGGGAAGCCGGCCAGCT 1480
Query 1070 ACAGCCCCCATATGGTCACACCCCAAGGGGGCGCGGGGACCTTACCGTTGTCCCAAGCTTCCAGCAGTCTGAGC 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACAGCCCCCATATGGTCACACCCCAAGGGGGCGCGGGGACCTTACCGTTGTCCCAAGCTTCCAGCAGTCTGAGC 1554
Query 1144 A------------------------------------------------------------------------- 1144
|
Sbjct 1555 ACAACAGTTACTACCTTATCCTCAGCTGTGGGGACGCTCCACCCCAGCCGGACAGCTGGAGGGGGTGGGGGCGG 1628
Query 1145 ---------------------------------------------------------------CAACAGCACAA 1155
|||||||||||
Sbjct 1629 GGGCGGGGCTGCGCCCCCCCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCACCACCAACAGCACAA 1702
Query 1156 ACCCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCAGGCC----------------------------- 1200
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ACCCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCAGGCCTGAACCCCAGCACGGGAAGCACAATGGTG 1776
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1777 GGGTTGAGCTCCGGGCTGAGTCCAGCCCTCATGAGCAACAACCCTTTGGCCACTATCCAAGCCCTGGCCTCTGG 1850
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1851 TGGAACCCTGCCCCTTACCAGCCTTGATGGCAGCGGGAATCTGGTGCTGGGGGCAGCCGGTGCAGCCCCGGGGA 1924
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1925 GCCCTGGCCTGGTGACCTCGCCGCTCTTCTTGAATCATGCTGGGCTGCCCCTGCTCAGCACCCCGCCTGGTGTG 1998
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1999 GGCCTGGTCTCAGCAGCGGCTGCGGCTGTGGCAGCCTCCATCTCCAGCAAGTCTCCTGGCCTCTCCTCCTCATC 2072
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 2073 CTCTTCATCCTCATCCTCCTCCTCCTCCACTTGCAGCGAGACGGCAGCACAGACCCCTGGAGGTCCAGGGGGGC 2146
Query 1201 ----------------------- 1200
Sbjct 2147 CCGAGGCAGGGTCCAAACCTGAG 2169
