Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11047
- Subject:
- XM_017026887.2
- Aligned Length:
- 2169
- Identities:
- 1164
- Gaps:
- 1005
Alignment
Query 1 ATGGTTCACTCCAGCATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAGGTCTGGA 74
||||||||||||||||||||||||||||||||||||||
Sbjct 1 ------------------------------------ATGTCTAAGCCCCTGGAGGCCGAGAAGCAAGGTCTGGA 38
Query 75 CTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAACCCCCAAAATAAGACCT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 39 CTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAACCCCCAAAATAAGACCT 112
Query 149 CCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAA-------------------------------------- 184
||||||||||||||||||||||||||||||||||||
Sbjct 113 CCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAAAGGTGGGCATTCTCTCTGGCCTCCACTTAACATTCTGG 186
Query 185 ----------------------------AGATCAAGGCTGAAGACCCCAGTGGCGATTCAGCCCCAGCAGCACC 230
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 187 GGTCCCGGACCCTGCCTCTCTCCCCCCCAGATCAAGGCTGAAGACCCCAGTGGCGATTCAGCCCCAGCAGCACC 260
Query 231 CCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGCAGCCAGCTAGCTGG-- 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 261 CCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGCAGCCAGCTAGCTGGGC 334
Query 303 -------------------------------------------------------------------------- 302
Sbjct 335 TCACGGCACTGATGCCAGCTCAGCAGCAGCTCCTCCTGCAGCAAGCCCAGGCCCAGCTCCTGGCCGCCGCCGTG 408
Query 303 -------------------------------------------------------------------------- 302
Sbjct 409 CAGCAGTCCAGTGCCGCCGCTGCCGCTAACGCCGCTGCCGCCGCCGCCGCCGCCTCCGCCTCCTCCTCTACTTC 482
Query 303 -------------------------------------------------------------------------- 302
Sbjct 483 CTCCTCCTCCTCCTCCTCTGCCTCCTCCTCGACCTCACAGCCCCCAGCCTCCTCTGGGGGGGGTGACCTGCCAC 556
Query 303 -------------------------------------------------------------------------G 303
|
Sbjct 557 CACCACAGCCTGCCAGCCAGCCCCCTGGGACCCCACAGCTCACCTTGTCCCAACCCATCCAGCTCACAGCACAG 630
Query 304 GACATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCAGCCACCTGCTCAGTT 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 631 GACATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCAGCCACCTGCTCAGTT 704
Query 378 CCTGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCCAGCTACCTCAGCAAA 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 705 CCTGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCCAGCTACCTCAGCAAA 778
Query 452 CCCAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACA--------------------------- 498
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 CCCAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACACAGGCCGTGACCCGCCCTACGCTGCCC 852
Query 499 ---------------------CAGCCCCCCAAATGCTTGGAGCCACCATCCCACCCCGAGGAGCCCAGTGATCT 551
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 853 GACCCGCACCTCTCGCACCCGCAGCCCCCCAAATGCTTGGAGCCACCATCCCACCCCGAGGAGCCCAGTGATCT 926
Query 552 GGAGGAGCTGGAGCAATTCGCCCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACGCAGGGTGATGTGG 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 927 GGAGGAGCTGGAGCAATTCGCCCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACGCAGGGTGATGTGG 1000
Query 626 GCCTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAGACGACCATTTCCCGCTTCGAGGCCCTCAACCTG 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1001 GCCTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAGACGACCATTTCCCGCTTCGAGGCCCTCAACCTG 1074
Query 700 AGCTTCAAGAACATGTGCAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGATGCAGAGACTATGTCTGTGGA 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1075 AGCTTCAAGAACATGTGCAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGATGCAGAGACTATGTCTGTGGA 1148
Query 774 CTCAAGCCTGCCCAGCCCCAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGCCTGCCCGGCCGGAGACGCA 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1149 CTCAAGCCTGCCCAGCCCCAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGCCTGCCCGGCCGGAGACGCA 1222
Query 848 AGAAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCGAACCAGAAGCCTACC 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1223 AGAAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCGAACCAGAAGCCTACC 1296
Query 922 TCAGAGGAGATCCTGCTGATCGCCGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTGCAACCG 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1297 TCAGAGGAGATCCTGCTGATCGCCGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTGCAACCG 1370
Query 996 GCGCCAGAAGGAGAAACGCATCAACCCCTGCAGTGCGGCCCCCATGCTGCCCAGCCCAGGGAAGCCGGCCAGCT 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1371 GCGCCAGAAGGAGAAACGCATCAACCCCTGCAGTGCGGCCCCCATGCTGCCCAGCCCAGGGAAGCCGGCCAGCT 1444
Query 1070 ACAGCCCCCATATGGTCACACCCCAAGGGGGCGCGGGGACCTTACCGTTGTCCCAAGCTTCCAGCAGTCTGAGC 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1445 ACAGCCCCCATATGGTCACACCCCAAGGGGGCGCGGGGACCTTACCGTTGTCCCAAGCTTCCAGCAGTCTGAGC 1518
Query 1144 A------------------------------------------------------------------------- 1144
|
Sbjct 1519 ACAACAGTTACTACCTTATCCTCAGCTGTGGGGACGCTCCACCCCAGCCGGACAGCTGGAGGGGGTGGGGGCGG 1592
Query 1145 ---------------------------------------------------------------CAACAGCACAA 1155
|||||||||||
Sbjct 1593 GGGCGGGGCTGCGCCCCCCCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCACCACCAACAGCACAA 1666
Query 1156 ACCCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCAGGCC----------------------------- 1200
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1667 ACCCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCAGGCCTGAACCCCAGCACGGGAAGCACAATGGTG 1740
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1741 GGGTTGAGCTCCGGGCTGAGTCCAGCCCTCATGAGCAACAACCCTTTGGCCACTATCCAAGCCCTGGCCTCTGG 1814
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1815 TGGAACCCTGCCCCTTACCAGCCTTGATGGCAGCGGGAATCTGGTGCTGGGGGCAGCCGGTGCAGCCCCGGGGA 1888
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1889 GCCCTGGCCTGGTGACCTCGCCGCTCTTCTTGAATCATGCTGGGCTGCCCCTGCTCAGCACCCCGCCTGGTGTG 1962
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1963 GGCCTGGTCTCAGCAGCGGCTGCGGCTGTGGCAGCCTCCATCTCCAGCAAGTCTCCTGGCCTCTCCTCCTCATC 2036
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 2037 CTCTTCATCCTCATCCTCCTCCTCCTCCACTTGCAGCGAGACGGCAGCACAGACCCCTGGAGGTCCAGGGGGGC 2110
Query 1201 ----------------------- 1200
Sbjct 2111 CCGAGGCAGGGTCCAAACCTGAG 2133
