Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11102
- Subject:
- NR_159808.1
- Aligned Length:
- 3269
- Identities:
- 1275
- Gaps:
- 1987
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCGAGTAGCTGCGATTACAGGCATGCGCCACCACGCCCGGCTAATTTTATATTTTTAGTAGAGACGGGGTTCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCATGTTGGTCAGGCTGATCTCGAACTCCCGACCTCAGGTGATCAGCCCACCTCGGCCTCCCAAATTGCTGGGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTACAGTCGTGAGCCACCGCGCCCGGCCAGGGAGGGACACTTTCTGTAAACTCCCCAAAGTGCGGACTCCAGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGTGCACTTTGGAGGTCCTGAGCTCCCGGTTATGTATTGAATGCAGTAAAGATTTATGTGTGATCACCCACCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGGATTTCCCCAAAAGCTGGACCTGGCCTACTATTTGGTGTATGTGTGTGTTTAAATGGTTATTGGGAAATGG 370
Query 1 -------------------------ATGAGG--GAGCCGGAAGAG---------------CTGATGCCCGATTC 32
||||.| |.|||..||.|| |.||| |.|||||
Sbjct 371 TAGGGGTTTTTAGTCTTTCTTCAAAATGACGCTGTGCCACAACAGTTTGTGAATACTACTCAGAT--CAGATTC 442
Query 33 GGGTGCTGTGTTTACATTTGGGAAAAGTAAATTTGCTGAAAATAATCCCGGTAAATTCTGGTTTAAAAATGATG 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 443 GGGTGCTGTGTTTACATTTGGGAAAAGTAAATTTGCTGAAAATAATCCCGGTAAATTCTGGTTTAAAAATGATG 516
Query 107 TCCCTGTACATCTTTCATGTGGAGATGAACATTCTGCTGTTGTTACCGGAAATAATAAACTTTACATGTTTGGC 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 517 TCCCTGTACATCTTTCATGTGGAGATGAACATTCTGCTGTTGTTACCGGAAATAATAAACTTTACATGTTTGGC 590
Query 181 AGTAACAACTGGGGTCAGTTAGGATTAGGATCAAAGTCAGCCATCAGCAAGCCAACATGTGTCAAAGCTCTAAA 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 AGTAACAACTGGGGTCAGTTAGGATTAGGATCAAAGTCAGCCATCAGCAAGCCAACATGTGTCAAAGCTCTAAA 664
Query 255 ACCTGAAAAAGTGAAATTAGCTGCCTGTGGAAGGAACCACACCCTGGTGTCAACAGAAGGAGGCAATGTATATG 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 665 ACCTGAAAAAGTGAAATTAGCTGCCTGTGGAAGGAACCACACCCTGGTGTCAACAGAAGGAGGCAATGTATATG 738
Query 329 CAACTGGTGGAAATAATGAAGGACAGTTGGGGCTTGGTGACACCGAAGAAAGAAACACTTTTCATGTAATTAGC 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 739 CAACTGGTGGAAATAATGAAGGACAGTTGGGGCTTGGTGACACCGAAGAAAGAAACACTTTTCATGTAATTAGC 812
Query 403 TTTTTTACATCCGAGCATAAGATTAAGCAGCTGTCTGCTGGATCTAATACTTCAGCTGCCCTAACTGAGGATGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 813 TTTTTTACATCCGAGCATAAGATTAAGCAGCTGTCTGCTGGATCTAATACTTCAGCTGCCCTAACTGAGGATGG 886
Query 477 AAGACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAATTGGTTTAAAAAATGTAAGTAATGTCTGTGTCCCTC 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 AAGACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAATTGGTTTAAAAAATGTAAGTAATGTCTGTGTCCCTC 960
Query 551 AGCAAGTGACCATTGGGAAACCTGTCTCCTGGATCTCTTGTGGATATTACCATTCAGCTTTTGTAACAACAGAT 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 AGCAAGTGACCATTGGGAAACCTGTCTCCTGGATCTCTTGTGGATATTACCATTCAGCTTTTGTAACAACAGAT 1034
Query 625 GGTGAGCTATATGTGTTTGGAGAACCTGAGAATGGGAAGTTAGGTCTTCCCAATCAGCTCCTGGGCAATCACAG 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 GGTGAGCTATATGTGTTTGGAGAACCTGAGAATGGGAAGTTAGGTCTTCCCAATCAGCTCCTGGGCAATCACAG 1108
Query 699 AACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGAGAGCATACTGTGGTTC 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109 AACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGAGAGCATACTGTGGTTC 1182
Query 773 TCACGGAGAATGCTGTGTATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAA 846
|||||
Sbjct 1183 TCACG--------------------------------------------------------------------- 1187
Query 847 ACTTCAGAACCCAAAGTCATTGAGAATATTAGGGATCAAACAATAAGTTATATTTCTTGTGGAGAAAATCACAC 920
Sbjct 1188 -------------------------------------------------------------------------- 1187
Query 921 AGCTTTGATAACAGATATCGGCCTTATGTATACTTTTGGAGATGGTCGCCACGGAAAATTAGGACTTGGACTGG 994
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1188 -------------GATATCGGCCTTATGTATACTTTTGGAGATGGTCGCCACGGAAAATTAGGACTTGGACTGG 1248
Query 995 AGAATTTTACCAATCACTTCATTCCTACTTTGTGCTCTAATTTTTTGAGGTTTATAGTTAAATTGGTTGCTTGT 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1249 AGAATTTTACCAATCACTTCATTCCTACTTTGTGCTCTAATTTTTTGAGGTTTATAGTTAAATTGGTTGCTTGT 1322
Query 1069 GGTGGATGTCACATGGTAGTTTTTGCTGCTCCTCATCGTGGTGTGGCAAAAGAAATTGAATTCGATGAAATAAA 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1323 GGTGGATGTCACATGGTAGTTTTTGCTGCTCCTCATCGTGGTGTGGCAAAAGAAATTGAATTCGATGAAATAAA 1396
Query 1143 TGATACTTGCTTATCTGTGGCGACTTTTCTGCCGTATAGCAGTTTAACCTCAGGAAATGTACTGCAGAGGACTC 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1397 TGATACTTGCTTATCTGTGGCGACTTTTCTGCCGTATAGCAGTTTAACCTCAGGAAATGTACTGCAGAGGACTC 1470
Query 1217 TATCAGCACGTATGCGGCGAAGAGAGAGGGAGAGGTCTCCAGATTCTTTTTCAATGAGGAGAACACTACCTCCA 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1471 TATCAGCACGTATGCGGCGAAGAGAGAGGGAGAGGTCTCCAGATTCTTTTTCAATGAGGAGAACACTACCTCCA 1544
Query 1291 ATAGAAGGGACTCTTGGCCTTTCTGCTTGTTTTCTCCCCAATTCAGTCTTTCCACGATGTTCTGAGAGAAACCT 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1545 ATAGAAGGGACTCTTGGCCTTTCTGCTTGTTTTCTCCCCAATTCAGTCTTTCCACGATGTTCTGAGAGAAACCT 1618
Query 1365 CCAAGAGAGTGTCTTATCTGAACAGGACCTCATGCAGCCAGAGGAACCA------------------------- 1413
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1619 CCAAGAGAGTGTCTTATCTGAACAGGACCTCATGCAGCCAGAGGAACCAGATTATTTGCTAGATGAAATGACCA 1692
Query 1414 -------------------------------------------------------------------GACACAC 1420
|||||||
Sbjct 1693 AAGAAGCAGAGATAGATAATTCTTCAACTGTAGAAAGCCTTGGAGAAACTACTGATATCTTAAACATGACACAC 1766
Query 1421 ATCATGAGCCTGAATTCCAA------------------------------------------------------ 1440
||||||||||||||||||||
Sbjct 1767 ATCATGAGCCTGAATTCCAATGAAAAGTCATTAAAATTATCACCAGTTCAGAAACAAAAGGATCATGAATTTTC 1840
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 1841 TAAAACTGAGGAACTAAAACTAGAAGATGTGGATGAGGAAATTAATGCTGAAAATGTGGAAAGCAAGAAGAAAA 1914
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 1915 CTGTGGGAGATGATGAAAGTGTTCCTACAGGTTATCACAGTAAAACAGAAGGAGCAGAAAGAACCAATGATGAT 1988
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 1989 AGCTCAGCTGAAACTATTGAAAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAA 2062
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2063 CCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAGTGAAACAACACCAA 2136
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2137 GCAAAGACATGAAAAAAACAAAGAAGATGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCGCGATCT 2210
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2211 TGGCTCACCACAATCCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGAGATTACAG 2284
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2285 GCATGTGCCACCATGCCTGGCTGATTTTGTACTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTC 2358
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2359 TCAAACTCCTGACCTCAGGTGATCCGCCTGTCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCAT 2432
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2433 GCCCAGCAGATTTTTCTGTTCAAAAGAGTCCCCTCAATAAATCAAAAGATTGTCAAGAATAACAATGAGCCGCT 2506
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2507 CCCAGAGATAAAATCCATAGGAGACCAGATCATTTTAAAAAGTGATAATAAAGATGCCGACCAGAACCACATGA 2580
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2581 GTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGATCAAAATCCTGTACAATACTATAAATATAT 2654
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2655 ATTTATGTTTTCACAGTCACCAAGTGTATTGTAATGTATACTTGAAAAATGTTATAACTTATGAAGTAAAGTTT 2728
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2729 CTGATAGTAGTCTTTAAAAGATATAAGACTTAATATGTTTTATTCAGCTTCTATAAGTGTGACCAGTTTTGATA 2802
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2803 TTTATTTATGCTAATATTTTTAACAAGTCATTTCAAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGC 2876
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2877 CTTAACTGTTCAGTATTGCAATAAAAAATATATTTTTATATGTGGAAAATTGAAATAAGATATTTCCTAGTTTT 2950
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2951 TACTAAACAATTTTACTTCTTTATAATTTTATAAGGCAATATTTGCAATCTTACGACACTGTAACAGTTTTTGA 3024
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 3025 TGTATTTACAATTTTTACAAAACTGAGGTAAAATTGTTTATAATGAACATATTTTAATAAACTATATCTGGTCA 3098
Query 1441 ------------- 1440
Sbjct 3099 GTTCCACTGTTAA 3111
