Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11109
- Subject:
- XM_006534315.3
- Aligned Length:
- 1575
- Identities:
- 1043
- Gaps:
- 462
Alignment
Query 1 ATGAGGCGACGAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGC 74
||||||||||||.|||||||||||||||||||||.|||.||.|||||||||.||||||||||||||||||||||
Sbjct 1 ATGAGGCGACGACGGAGGCGGGACGGCTTTTACCTAGCGCCTGACTTCCGACACAGGGAAGCTGAGGACATGGC 74
Query 75 AGGAGTGTTTGACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGT 148
|||||||||||||||||||||||||||||||||.||.||.||||||||||||||||||||||||||
Sbjct 75 AGGAGTGTTTGACATAGACCTGGACCAGCCAGAAGATGCAGGCTCTGAGGATGAGCTGGAGGAGGG-------- 140
Query 149 TAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATC 222
Sbjct 141 -------------------------------------------------------------------------- 140
Query 223 TCAGAAACTAGTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAA 296
Sbjct 141 -------------------------------------------------------------------------- 140
Query 297 AGGGGGCTATGGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAAATATTTGCCATGAAGG 370
Sbjct 141 -------------------------------------------------------------------------- 140
Query 371 TGCTTAAAAAGGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGAG 444
||||||||||||.||.||||||||.||.||.||.||.||.||||||||.|||||.|||||||||
Sbjct 141 ----------GGCAATGATAGTGAGGAATGCTAAGGACACGGCCCACACGAAAGCAGAGCGGAACATTCTGGAG 204
Query 445 GAAGTAAAGCATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTGA 518
|||||.||.||.||.|||||.|||||..|.|||||||||||||||||.||.|||||.||||||||||||||.||
Sbjct 205 GAAGTGAAACACCCTTTCATTGTGGACCTGATTTATGCCTTTCAGACCGGAGGAAAGCTCTACCTCATCCTCGA 278
Query 519 GTATCTCAGTGGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCTGCTTTT 592
|||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||.|||||||
Sbjct 279 GTATCTCAGTGGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTCATGGAAGACACAGCGTGCTTTT 352
Query 593 ACTTGGCAGAAATCTCCATGGCTTTGGGGCATTTACATCAAAAGGGGATCATCTACAGAGACCTGAAGCCGGAG 666
|||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 353 ACTTGGCTGAAATCTCCATGGCTTTGGGGCATTTACATCAAAAAGGGATCATCTACAGAGACCTGAAGCCGGAG 426
Query 667 AATATCATGCTTAATCACCAAGGTCATGTGAAACTAACAGACTTTGGACTATGCAAAGAATCTATTCATGATGG 740
||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 427 AACATCATGCTTAATCACCAAGGTCACGTGAAACTAACAGACTTTGGACTATGCAAAGAATCTATTCATGATGG 500
Query 741 AACAGTCACACACACATTTTGTGGAACAATAGAATACATGGCCCCTGAAATCTTGATGAGAAGTGGCCACAATC 814
|||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||.|
Sbjct 501 AACAGTCACGCACACATTTTGTGGAACAATAGAATACATGGCCCCTGAAATCTTAATGAGAAGCGGCCACAACC 574
Query 815 GTGCTGTGGATTGGTGGAGTTTGGGAGCATTAATGTATGACATGCTGACTGGAGCACCCCCATTCACTGGGGAG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 575 GTGCTGTGGATTGGTGGAGTTTGGGAGCATTAATGTATGACATGCTGACTGGAGCACCTCCATTCACTGGGGAG 648
Query 889 AATAGAAAGAAAACAATTGACAAAATCCTCAAATGTAAACTCAATTTGCCTCCCTACCTCACACAAGAAGCCAG 962
|||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||..|
Sbjct 649 AATAGAAAGAAAACAATTGACAAAATCCTCAAATGTAAACTTAATTTGCCTCCCTACCTCACACAAGAAGCTCG 722
Query 963 AGATCTGCTTAAAAAGCTGCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTCCTGGGGACGCTGGAGAAG 1036
|||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||.||||||||||
Sbjct 723 AGATCTGCTTAAAAAGCTGCTGAAAAGAAATGCTGCTTCTCGTCTTGGAGCTGGCCCTGGGGATGCTGGAGAAG 796
Query 1037 TTCAAGCTCATCCATTCTTTAGACACATTAACTGGGAAGAACTTCTGGCTCGAAAGGTGGAGCCCCCCTTTAAA 1110
|.|||||||||||.||.||.||||||||||||||||||||||||||||||||.||||||||.||.||||||||.
Sbjct 797 TCCAAGCTCATCCTTTTTTCAGACACATTAACTGGGAAGAACTTCTGGCTCGGAAGGTGGAACCTCCCTTTAAG 870
Query 1111 CCTCTGTTGCAATCTGAAGAGGATGTAAGTCAGTTTGATTCCAAGTTTACACGTCAGACACCTGTCGACAGCCC 1184
||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||.||||||||
Sbjct 871 CCTCTGTTGCAATCTGAAGAGGATGTGAGTCAGTTTGATTCAAAGTTTACACGTCAGACACCTGTTGACAGCCC 944
Query 1185 AGATGACTCAACTCTCAGTGAAAGTGCCAATCAGGTCTTTCTGGGTTTTACATATGTGGCTCCATCTGTACTTG 1258
.||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 945 TGATGACTCCACTCTCAGTGAAAGTGCCAACCAGGTCTTTCTGGGTTTTACATATGTGGCTCCATCTGTACTTG 1018
Query 1259 AAAGTGTGAAAGAAAAGTTTTCCTTTGAACCAAAAATCCGATCACCTCGAAGATTTATTGGCAGCCCACGAACA 1332
||||||||||||||||||||||.||||||||||||||||||||.|||.|||||||||||||.||.|||||||||
Sbjct 1019 AAAGTGTGAAAGAAAAGTTTTCATTTGAACCAAAAATCCGATCTCCTAGAAGATTTATTGGTAGTCCACGAACA 1092
Query 1333 CCTGTCAG---------------TACTG--------------CTATGTGC------------------------ 1353
|||||||| |.||| |.|.||||
Sbjct 1093 CCTGTCAGCCCAGTCAAATTCTCTCCTGGGGATTTCTGGGGACGAGGTGCTTCAGCCAGCACGGCAAATCCTCA 1166
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1167 GACCCCTGTGGAATACCCAATGGAAACAAGTGGGATAGAGCAGATGGATGTGACAGTGAGCGGGGAAGCATCAG 1240
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1241 CGCCACTTCCAATCCGACAACCCAACTCCGGGCCGTACAAAAAACAAGCTTTTCCTATGATCTCCAAACGGCCA 1314
Query 1354 --------------------- 1353
Sbjct 1315 GAGCACCTGCGGATGAATCTA 1335