Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11159
- Subject:
- XM_017004782.2
- Aligned Length:
- 3798
- Identities:
- 685
- Gaps:
- 3093
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGACCGGCCCCTGTCGTCGTCGGCGGAGGCGGAGGAGGAACTGGAGTGGCAAGTGGCGAGTCGCAGGAGGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCTGGGCCAAGTGCCGCAGCTCCTGGCAAGCGTCGGAGACGGAGGATCTGTCCACAGAAGCGACGACGCAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACGAGGAGGAGGACGAGGAGGAGGACCTCCCCGGCGCGCAGCTGCCGGCAGCGGGGGGAAGAGGAAACGTGCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACGAGAAGATCGCGATATGGCTCAAGGACTGCCGTACACCTTTGGGAGCCTCACTGGATGAACAAAGCAGTAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TACACTCAAGGGTGTGCTTGTGAGAAATGGAGGAAGTTTTGAAGATGATTTGTCATTGGGAGCTGAAGCCAACC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACCTCCATGAAAGTGATGCTCAAATTGAAAACTGCAATAATATCTTGGCCAAAGAGAGAAGATTACAGTTTCAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGAAAGGGAGAAGTATGAATTCCACTGGATCTGGGAAAAGTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGAACTTTATGAGGAAGATCCTGAAGAAATTCTTTATAATCTTGGATTTGGACGTGATGAACCAGATATTGCTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTAAAATTCCTTCCAGATTTTTTAATTCATCATCCTTTGCCAAAGGGATAGATATTAAAGTATTTTTGAGTGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGATGCAACGGATGGAAGTAGAAAACCCAAATTATGCTTTAACAAGCCGTTTTCGTCAAATTGAAGTGCTTAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TACTGTGGCCAATGCGTTTTCTTCTTTATATTCTCAAGTCTCCGGGACGCCCCTGCAGAGAATTGGAAGTATGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAAACACTCTCAAAACTGAATTTATGTGTTGATAAAACAGAGAAAGGAGAAAGTAGTAGTCCTTCTCCATCAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGAAAAAGGAAAGATTCTAAATGTTTCAGTGATTGAAGAAAGTGGCAATAAAAACGATCAAAAGTCTCAAAAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTATGAAGAAGAAAGAGTCATCTTCTATGTTGGCTACAGTTAAAGAAGAAGTCTCTGGTAGTTCAGCAGCTGTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACGGAGAATGCTGATAGTGATAGAATTTCTGATGAAGCAAATAGTAATTTTAACCAAGGAACTGAAAATGAACA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAGTAAAGAAACTCAAAGTCATGAGAGTAAACTGGGTGAGGAATCTGGTATTGTAGAATCCAAATTAGATAGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATTTCAACATATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATAATGACACAGCAGAAGGACTCCTTCGAAAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGAAGAGGTTCAAAGTACGGAGGGAGAAGCTCCTCATGTTCCAGCCACTTACCAGCTAGGTCTTACGAAGTCGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAAGAGATCATCTGTTACGTACTGCAAGTCAGCATTCCGATAGCAGTGGTTTTGCTGAAGATTCTACAGACTGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTATCCCTTAATCATCTTCAGGTTCAGGAGTCCTTGCAGGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GACAACAGTTACGTCACTTGGTGAAGACCTTGCCACACCAACAGCACAAGACCAGCCTTATTTTAATGAATCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGAGGAGTCTCTTGTCCCTCTTCAGAAGGGACTAGAGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGCCAGGATTTCCCTCAGTGCAACACCATTGAGAATACAGGAACTAAACAGTCCACCTGTAGTCCAGGGGATCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TATCATTGAAATTACTGAAGTGGAAGAGGATTTGTTTCCAGCAGAGACAGTAGAGCTACTGAGGGAAGCAAGTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTGAAAGTGATGTGGGTAAAAGCAGTGAAAGTGAATTTACTCAGTATACCACACACCATATTCTGAAATCATTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAATACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAGTCTGTCTAATCAAAGGATGGGGCGTAGCCTGCTAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AATCAAAAGATTTGTTAAAACAAAGGTACTTATTTGCAAAAGCTGGCTATCCTCTAAGAAGGTCTCAGTCTTTA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCAACCACCTTATTGAGCCCAGTAAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTCCAGGAAAAGAGACCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ATGCAGCCCACCTTCCTTCACCTATAAGTACACACCTGAAGAGGAGCAGGAATTGGAAAAGCGGGTGATGGAAC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATGATGGTCAGTCTTTAGTTAAATCGACCATTTTCATCTCTCCATCATCTGTGAAGAAAGAAGAAGCCCCCCAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGTGAGGCGCCGCGGGTGGAGGAATGCCATCATGGAAGGACTCCTACCTGTTCACGGCTTGCTCCACCACCAAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTCTCAGTCTACCTGTTCCCTTCATTCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTGTGAGCACACAAGAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CTCTGAGCACTCACAGTGTTCCCAACATATCAGGGGCTACTTGTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TACTCACATAGACATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAATGCAGTT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GCGAAGAGTATTACATGATATTAGAAACTCACTGCAGAATCTTTCACAGTACCCTATGATGAGAGGACCTGATC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTGCTGCTGCTCCATATAGTACTCAGAAATCATCTGTTCTACCTCTTTATGAAAATACTTTTCAGGAGCTCCAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTAATGAGGCGGAGCCTGAATTTGTTTAGAACACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAAC 2960
Query 1 ----------------ATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTCCAGGGTTTGAGAAATTCAGTCC 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 CATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTCCAGGGTTTGAGAAATTCAGTCC 3034
Query 59 GAATGGAACTTCAGGACCTGGAACTGCAGCTGGAGGAGCGCCTGCTGGGCCTGGAGGAGCAGCTTCGTGCTGTG 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 GAATGGAACTTCAGGACCTGGAACTGCAGCTGGAGGAGCGCCTGCTGGGCCTGGAGGAGCAGCTTCGTGCTGTG 3108
Query 133 CGCATGCCTTCACCCTTCCGCTCCTCCGCACTCATGGGAATGTGTGGCAGTAGAAGCGCTGATAACTTGTCATG 206
||||||||||||||||||||||||||||||||||||
Sbjct 3109 CGCATGCCTTCACCCTTCCGCTCCTCCGCACTCATG-------------------------------------- 3144
Query 207 CCCTTCTCCATTGAATGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTCTGAATTGG 280
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3145 ----------------------------GTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTCTGAATTGG 3190
Query 281 GCCTGGGACTTGGAGAAATGGGATTTGAAATTCCTCCTGGAGAAAGCTCAGAATCTGTTTTTTCCCAAGCAACA 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3191 GCCTGGGACTTGGAGAAATGGGATTTGAAATTCCTCCTGGAGAAAGCTCAGAATCTGTTTTTTCCCAAGCAACA 3264
Query 355 TCAGAATCATCTTCTGTATGTTCTGGTCCCTCTCATGCTAACAGAAGAACTGGAGTACCTTCTACTGCCTCAGT 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3265 TCAGAATCATCTTCTGTATGTTCTGGTCCCTCTCATGCTAACAGAAGAACTGGAGTACCTTCTACTGCCTCAGT 3338
Query 429 GGGCAAATCCAAAACCCCATTAGTGGCAAGGAAGAAAGTGTTCCGAGCATCGGTGGCTCTAACGCCAACAGCTC 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3339 GGGCAAATCCAAAACCCCATTAGTGGCAAGGAAGAAAGTGTTCCGAGCATCGGTGGCTCTAACGCCAACAGCTC 3412
Query 503 CTTCTAGAACAGGCTCTGTGCAGACACCTCCAGATTTGGAAAGTTCTGAGGAAGTTGATGCAGCTGAAGGAGCC 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3413 CTTCTAGAACAGGCTCTGTGCAGACACCTCCAGATTTGGAAAGTTCTGAGGAAGTTGATGCAGCTGAAGGAGCC 3486
Query 577 CCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGGGCATGGAAAACTCCCATCAATGCCAGCTGCTGAGGA 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3487 CCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGGGCATGGAAAACTCCCATCAATGCCAGCTGCTGAGGA 3560
Query 651 AATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGATT---AAAGAGTCTATT-GTTGGG 720
|||||||||||||||||||||||||||||||||||||||||||||||||.|| |..||..||||| |.||.|
Sbjct 3561 AATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGGTTGGCATGGATCCTATTAGCTGTG 3634
Query 721 GAAATCAGACGGGA------AATTGTAAGTGGACTTTTGGCAGCAGTATCTTCAAGTAAAGCGTCTAATTCTAA 788
|.|.||.||| |||..|| ||.|||..||| || ||.|.||| |..
Sbjct 3635 ----TAATACTGGAATTATCAATGATA--TGCACTGGTGG-AG-------------------GTGTTATT-TGT 3681
Query 789 GC-----AAGAT------TATCAT 801
|| ||||| |.|
Sbjct 3682 GCTTTAGAAGATACTTGCTGT--- 3702
