Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11214
- Subject:
- XM_011531447.3
- Aligned Length:
- 4646
- Identities:
- 397
- Gaps:
- 4210
Alignment
Query 1 ATGAAATCGTGCGCAGTGTCGCTCACTACCGCCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGG 74
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAATCCTGCGCAGTGTCGCTCACTACCGCCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGG 74
Query 75 AAAAGCGAGCCGCGAGAGTGAAGAGGAGTCTGTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAAAGCGAGCCGCGAGAGTGAAGAGGAGTCTGTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGG 148
Query 149 ACAGCCGTCTCTTCGGGTTCGTGAGGCTTCATGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAGG----- 217
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACAGCCGTCTCTTCGGGTTCGTGAGGCTTCATGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAGGCTGTT 222
Query 218 ----------------------TAAAAGC--AACCAGACGCAAAG------------TCTTT---------GGT 246
||||||| | |.|.|||| ||||| |||
Sbjct 223 CGCTGCTACGAATCTTTAATCTTAAAAGCTGA-----AGGAAAAGTGGAGTCTGACTTCTTTTGCCAATTAGGT 291
Query 247 CCGCACTT------------------------------------TGC------------------TCTACCAAG 266
||||| ||| |.||| ||
Sbjct 292 ---CACTTCAACCTCTTGTTGGAAGATTATTCAAAAGCATTATCTGCATATCAGAGATATTACAGTTTAC--AG 360
Query 267 GC----------------CCCGCGTTCCT-TACCGCC----------------------CA------------- 288
|| .|.|||||..| ||..||| ||
Sbjct 361 GCTGACTACTGGAAGAATGCTGCGTTTTTATATGGCCTTGGTTTGGTCTACTTCTACTACAATGCATTTCATTG 434
Query 289 -GCCAGTA------------------TTTATTTTG------GCTCTGCTCCATGGCCAAGG------------- 324
||.|.|| |||||.||| |||.|..||.| |||||||
Sbjct 435 GGCAATTAAAGCATTTCAAGATGTCCTTTATGTTGACCCCAGCTTTTGTCGA--GCCAAGGAAATTCATTTACG 506
Query 325 ----GGTCGGA-----AAAGTG------------------------------TTTC---TTGCCT---TTG-CT 352
||.|..| |||||| |||| |.|||| ||| ||
Sbjct 507 ACTTGGGCTCATGTTCAAAGTGAACACAGACTACAAGTCTAGTTTAAAGCATTTTCAGTTAGCCTTGATTGACT 580
Query 353 G---TCCCCGTACT----------CTGGAAT---ACTTC-----GCCCCTTGCT-------CCAGA------CT 392
| |||..||||| |||.||| |.||| ||||.||..| ||||| .|
Sbjct 581 GTAATCCATGTACTTTGTCCAATGCTGAAATTCAATTTCATATTGCCCATTTGTATGAAACCCAGAGGAAGTAT 654
Query 393 CCCTTCTACTCTG---AGGA--------AAAAAAAAATCGGACGCTTTGG--GACCGGGCTAAACCGGGT--CT 451
| |.|||| |||| ||.|| ||||.| |||.| .||||| | ||
Sbjct 655 C------ATTCTGCAAAGGAGGCATATGAACAA-----------CTTTTGCAGACAG---AAAACC---TTCCT 705
Query 452 ACACCA-------CA-------TGC--CTGTTACTT-------------------------------------- 471
.|||.| || ||| |.||||..|
Sbjct 706 GCACAAGTAAAAGCAACTGTATTGCAACAGTTAGGTTGGATGCATCATAATATGGATCTAGTAGGAGACAAAGC 779
Query 472 -------------------------------------------------------------------------- 471
Sbjct 780 CACAAAGGAAAGCTATGCTATTCAGTATCTCCAAAAGTCTTTGGAGGCAGATCCTAATTCTGGCCAATCGTGGT 853
Query 472 -------------------------------------------------------------------------- 471
Sbjct 854 ATTTTCTTGGAAGGTGTTATTCAAGTATTGGGAAAGTTCAGGATGCCTTTATATCTTACAGGCAATCTATTGAT 927
Query 472 -------------------------------------------------------------------------- 471
Sbjct 928 AAATCAGAAGCAAGTGCAGATACATGGTGTTCAATAGGTGTGTTGTATCAGCAGCAAAATCAGCCTATGGATGC 1001
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1002 TTTACAGGCATATATTTGTGCTGTACAATTGGACCATGGGCATGCCGCAGCCTGGATGGACCTAGGTACTCTCT 1075
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1076 ATGAATCCTGCAATCAACCTCAAGATGCCATTAAATGCTACCTAAATGCAGCTAGAAGCAAACGTTGTAGTAAT 1149
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1150 ACCTCTACGCTTGCTGCAAGAATTAAATTTCTACAGGCTTATAGAGCTCATGATCCAAATACTGAACATGTATT 1223
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1224 AAACCACAGTCAAACACCAATTTTACAGCAATCCTTGTCACTACACATGATTACTTCTAGCCAAGTAGAAGGCC 1297
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1298 TGTCCAGTCCTGCCAAGAAGAAAAGAACATCTAGTCCAACAAAGAATGGTTCTGATAACTGGAATGGTGGCCAG 1371
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1372 AGTCTTTCACATCATCCAGTACAGCAAGTTTATTCGTTGTGTTTGACACCACAGAAATTACAGCACTTGGAACA 1445
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1446 ACTGCGAGCAAATAGAGATAATTTAAATCCAGCACAGAAGCATCAGCTGGAACAGTTAGAAAGTCAGTTTGTCT 1519
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1520 TAATGCAGCAAATGAGACACAAAGAAGTTGCTCAGGTACGAACTACTGGAATTCATAACGGGGCCATAACTGAT 1593
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1594 TCATCACTGCCTACAAACTCTGTCTCTAATCGACAACCACATGGTGCTCTGACCAGAGTATCTAGCGTCTCTCA 1667
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1668 GCCTGGAGTTCGCCCTGCTTGTGTTGAAAAACTTTTGTCCAGTGGAGCTTTTTCTGCAGGCTGTATTCCTTGTG 1741
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1742 GCACATCAAAAATTCTAGGAAGTACAGACACTATCTTGCTAGGCAGTAATTGTATAGCAGGAAGTGAAAGTAAT 1815
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1816 GGAAATGTGCCTTACCTGCAGCAAAATACACACACTCTACCTCATAATCATACAGACCTGAACAGCAGCACAGA 1889
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1890 AGAGCCATGGAGAAAACAGCTATCTAACTCCGCTCAGGGGCTTCATAAAAGTCAGAGTTCATGTTTGTCAGGAC 1963
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1964 CTAATGAAGAACAACCTCTGTTTTCCACTGGGTCAGCCCAGTATCACCAGGCAACTAGCACTGGTATTAAGAAG 2037
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2038 GCGAATGAACATCTCACTCTGCCTAGTAATTCAGTACCACAGGGGGATGCTGACAGTCACCTCTCCTGTCATAC 2111
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2112 TGCTACCTCAGGTGGACAACAAGGCATTATGTTTACCAAAGAGAGCAAGCCTTCAAAAAATAGATCCTTGGTGC 2185
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2186 CTGAAACAAGCAGGCATACTGGAGACACATCTAATGGCTGTGCTGATGTCAAGGGACTTTCTAATCATGTTCAT 2259
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2260 CAGTTGATAGCAGATGCTGTTTCCAGTCCTAACCATGGAGATTCACCAAATTTATTAATTGCAGACAATCCTCA 2333
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2334 GCTCTCTGCTTTGTTGATTGGAAAAGCCAATGGCAATGTGGGTACTGGAACCTGTGACAAAGTGAATAATATTC 2407
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2408 ACCCAGCTGTTCATACAAAGACTGATCATTCTGTTGCCTCTTCACCCTCTTCAGCCATTTCCACAGCAACACCT 2481
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2482 TCTCCTAAATCCACTGAGCAGAGAAGCATAAACAGTGTTACCAGCCTTAACAGTCCTCACAGTGGATTACACAC 2555
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2556 AGTCAATGGAGAGGGGCTGGGGAAGTCACAGAGCTCTACAAAAGTAGACCTGCCTTTAGCTAGCCACAGATCTA 2629
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2630 CTTCTCAGATCTTACCATCAATGTCAGTGTCTATATGCCCCAGTTCAACAGAAGTTCTGAAAGCATGCAGGAAT 2703
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2704 CCAGGTAAAAATGGCTTGTCTAATAGCTGCATTTTGTTAGATAAATGTCCACCTCCAAGACCACCAACTTCACC 2777
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2778 ATACCCACCCTTGCCAAAGGACAAGTTGAATCCACCCACACCTAGTATTTACTTGGAAAATAAACGTGATGCTT 2851
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2852 TCTTTCCTCCATTACATCAATTTTGTACAAATCCAAAAAACCCTGTTACAGTAATACGTGGCCTTGCTGGAGCT 2925
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2926 CTTAAATTAGATCTTGGACTTTTCTCTACCAAAACTTTGGTAGAAGCTAACAATGAACATATGGTAGAAGTGAG 2999
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3000 GACACAGTTGCTGCAACCAGCAGATGAAAACTGGGATCCCACTGGAACAAAGAAAATCTGGCGTTGTGAAAGCA 3073
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3074 ATAGATCTCATACTACAATTGCCAAATACGCACAATACCAGGCTTCCTCCTTCCAGGAATCATTGAGAGAAGAA 3147
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3148 AATGAGAAAAGAACACAACACAAAGATCATTCAGATAACGAATCCACATCTTCAGAGAATTCTGGAAGGAGAAG 3221
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3222 GAAAGGACCTTTTAAAACCATAAAATTTGGGACCAACATTGACCTCTCTGATAACAAAAAGTGGAAGTTGCAGT 3295
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3296 TACATGAACTGACTAAACTTCCTGCTTTTGCGCGTGTGGTGTCAGCAGGAAATCTTCTAACCCATGTTGGGCAT 3369
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3370 ACCATTCTGGGCATGAATACAGTACAACTGTATATGAAAGTTCCAGGGAGTCGGACACCAGGTCACCAAGAAAA 3443
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3444 TAACAACTTCTGCTCTGTTAACATAAATATTGGTCCAGGAGATTGTGAATGGTTTGTTGTACCTGAAGATTATT 3517
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3518 GGGGTGTTCTGAATGACTTCTGTGAAAAAAATAATTTGAATTTTTTAATGAGTTCTTGGTGGCCCAACCTTGAA 3591
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3592 GATCTTTATGAAGCAAATGTCCCTGTGTATAGATTTATTCAGCGACCTGGAGATTTGGTCTGGATAAATGCAGG 3665
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3666 CACTGTGCATTGGGTTCAAGCTGTTGGCTGGTGCAATAACATTGCCTGGAATGTTGGTCCACTTACAGCCTGCC 3739
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3740 AGTATAAATTGGCAGTGGAACGGTATGAATGGAACAAATTGAAAAGTGTGAAGTCACCAGTACCCATGGTGCAT 3813
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3814 CTTTCCTGGAATATGGCACGAAATATCAAAGTCTCAGATCCAAAGCTTTTTGAAATGATTAAGTATTGTCTTTT 3887
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3888 GAAAATTCTGAAGCAATATCAGACATTGAGAGAAGCTCTTGTTGCAGCAGGAAAAGAGGTTATATGGCATGGGC 3961
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3962 GGACAAATGATGAACCAGCTCATTACTGTAGCATTTGTGAGGTGGAGGTTTTTAATCTGCTTTTTGTCACTAAT 4035
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4036 GAAAGCAATACTCAAAAAACCTACATAGTACATTGCCATGATTGTGCACGAAAAACAAGCAAAAGTTTGGAAAA 4109
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4110 TTTTGTGGTGCTCGAACAGTACAAAATGGAGGACCTAATCCAAGTTTATGATCAATTTACACTAGCCTCCCCAT 4183
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4184 GGCCACCCATGGACCAGTCGGCATTCACTTCCTCCCTTCTGCGGCCCATAAAAGCCCTGGGTTCAGGCAGAGCT 4257
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4258 GAGCAGACATCAGGTGACCAGCTGCAGAAAGGAGCTACCCACTCCAGGGCCTCATCTCTGCTGAGAGCTGCAGA 4331
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4332 GATGACCAGAAGACCTGCATCCAGAGAGGAGCTTCCTGATCCAGGGCTATTCTGTCACTCAATAAAGCTTCTCT 4405
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4406 TTGTCTTGTTCTCCTTCCATTTGTCCACGTTCCTCATTCTTCCCTGCCAAAGGAGAAGAACTTGGGAGCTGCTG 4479
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4480 GATGGTGGGGCTGAAAGCTGTAAAACAAACAGGGCTAACACGCCCATTGCTCACTACCTTGTGAGTGAAGAGGA 4553
Query 472 ---------------------------------------------------------- 471
Sbjct 4554 GAGAAGAGCTGTAGCCCTTCAGAGAGTCCAGACCTGGGAGCTCCTTGAGCCAGGGTTG 4611
