Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11240
- Subject:
- NR_149005.2
- Aligned Length:
- 2298
- Identities:
- 746
- Gaps:
- 1536
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAAAGGGACGGGGCTGGCAAAGGCCTGGTCTACCTCACCGATCCGGGTCGCGGGGGCTCCTAGGGGGTTCCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCACAGCTGGTGCGCGTGCGCAAGAGTGCGTCGAGGTTGTTCCGCGGCAATTTATGAAACTCGGAGCCGGCAGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGTTGAGGGTTCGGCGAGGTCAGGGATTCCTAGTTGCAGCGTGATTACCAACGCCAGCTCCCTTCACTGTCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGACAGCGATTCCGCGGCTCCTCTGAGAACTGGCGCTTGTGAGTGACTGAACGGGCCACTGGAGAGGAGCGGTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCACGGGTATCGTTCTCGTCAGCGGGCGGTGGGGACGCGGGGTCTTGGAATTGGGAATCACGCTTGAGGGCGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCATGCGGAACGTGCAGCTTACCTCAGCTTGCTTGCAGTTACCCAGTTTCCACGCTGCCCTCCAAGTGTTCATC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTTGCCACTTAAGCTACTTGCAGTCACGTCACACCTTGGATCTCTATCATCAAAACTATTCCACCTCGGAAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTACCTAAATGCAGCATGCCATCCTGAACGTCTCTCCCTGTCCTAGCTCTGTAACTGTTTACATTGCTCAGGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACCTGAATATTGGCTTTGTGTCTAAAGTTTCTGGAACTTTCCTCCTTACCGTGAAATAACTTGGCTTAAATCAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACTGCATATAGTACACAGGTGCTTAGCTCAAGCCTGAGAATTACTGCAATCTAGTAAGGCGGATTTGAACTACT 740
Query 1 ---------------------ATGCAGCCTCTGAGCAAGTTGATGGCTATCTCAAAACCTCGAAACCTGTCTCT 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTGGGAGTTCTATTTAGGAAGATGCAGCCTCTGAGCAAGTTGATGGCTATCTCAAAACCTCGAAACCTGTCTCT 814
Query 54 ACGTGAACAAAGAGAGGTTCTGAGAGCAGATATGTCTTGGCAGCAGGAAACCAACCCCGTCGTGGAGACACATG 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACGTGAACAAAGAGAGGTTCTGAGAGCAGATATGTCTTGGCAGCAGGAAACCAACCCCGTCGTGGAGACACATG 888
Query 128 ACTCTGAGGCATCTCGTCAAAAGTTCAGACATTTCCAGTATTTGAAAGTGTCTGGGCCCCATGAAGCCCTGAGC 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACTCTGAGGCATCTCGTCAAAAGTTCAGACATTTCCAGTATTTGAAAGTGTCTGGGCCCCATGAAGCCCTGAGC 962
Query 202 CAACTCTGGGAGCTCTGTCTTCAATGGCTGAGACCAGAGATTCATACAAAGAAGCAGATTATAGAACTGTTGGT 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CAACTCTGGGAGCTCTGTCTTCAATGGCTGAGACCAGAGATTCATACAAAGAAGCAGATTATAGAACTGTTGGT 1036
Query 276 GCTGGAACAATTCCTGGCAATCCTGCCTGAAGAAGTCAGGACTTGGGTGAATTTACAACATCCAAACAACAGTA 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCTGGAACAATTCCTGGCAATCCTGCCTGAAGAAGTCAGGACTTGGGTGAATTTACAACATCCAAACAACAGTA 1110
Query 350 AAGATATGGTGACCCTCATAGAAGATGTGATTGAAATGCTTGAAGATGAAGATATGCCCTGCAAGGACTCTGCC 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AAGATATGGTGACCCTCATAGAAGATGTGATTGAAATGCTTGAAGATGAAGATATGCCCTGCAAGGACTCTGCC 1184
Query 424 CTGCAGATGGGGAGCATCAAGGAGAAAATGAAAGCTGGCTCACGAACAGGCAAACCACAGGAACCAGTGACATT 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTGCAGATGGGGAGCATCAAGGAGAAAATGAAAGCTGGCTCACGAACAGGCAAACCAC---------------- 1242
Query 498 CAAAGATGTGGTTGTGGAATTCAGCAAGGAAGAGTGGGGGCAACTGGACTCTGCTGTAAAGAACCTGTACAGGA 571
Sbjct 1243 -------------------------------------------------------------------------- 1242
Query 572 ATGTGATGCTGGAAAACTTTAGGAACCTGAATTCATTGCGTAAAGCACATCTACTTTCCAAACCATTTGAGAGC 645
|||||||||||||||||||||||||||||||
Sbjct 1243 -------------------------------------------AGCACATCTACTTTCCAAACCATTTGAGAGC 1273
Query 646 CTTAAGTTGGAGAGTAAGAAAAAAAGATGGATAATGGAGAAAGAAATACCAAGGAAGACTATTTTTGACATGAA 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1274 CTTAAGTTGGAGAGTAAGAAAAAAAGATGGATAATGGAGAAAGAAATACCAAGGAAGACTATTTTTGACATGAA 1347
Query 720 GAGTATTTCTGGAGAAGAATCATCCCATGGAGTGATTATGACAAGGCTTACCGAAAGTGGTCACCCTTCTTCAG 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1348 GAGTATTTCTGGAGAAGAATCATCCCATGGAGTGATTATGACAAGGCTTACCGAAAGTGGACACCCTTCTTCAG 1421
Query 794 ATGCCTGGAAAGATGGAGTTTCCCTCT-------------TGTTGCCCAGG-----------CTGGAGTATAAT 843
|||||||||||| |||| ..|.|.|| || ||| |||.||.|.||
Sbjct 1422 ATGCCTGGAAAG--GGAG-AACACACTGAAGGAAGCAGAATG------AGGGGCACTAAGCACTGCAGGAGAA- 1485
Query 844 GAT-------GCAGTCTCGGCTCACTGCAACC-------TC---CACCTCTGGGTTCAAGT------------- 887
||| ||||.|||.|| ||| ||| || |||.|||.|| |.||||
Sbjct 1486 GATGGGGATGGCAGACTCAGC---CTG--ACCAAAGAAATCAATCACATCTTGG-TAAAGTAAGCCACTCTCAT 1553
Query 888 ---------GATT--------------------------CTCCTG-CCTCAGCCTCCT----GAG--------- 912
|||| || ||| ..|||||||||| .||
Sbjct 1554 TTGTGTCTGGATTAGAGTAGGATGAACATCAGAAAAGGGCT-CTGTGATCAGCCTCCTTTACTAGGCTTTAATG 1626
Query 913 -------------------------------------------------------------------------- 912
Sbjct 1627 TAACTGATTTTCCCTTTATTATCTCCTAAACTCCTAATTTAGAACAGCATATAATAAAGCCTTTTTGTGCAGCT 1700
Query 913 -------------------------------------------------------------------------- 912
Sbjct 1701 TTCTATCCAGGCACCAAGAGGGGAAACCAGCTCTTATATGCAGAAGTGACATACAATGCCTTCCTCCAAAATGC 1774
Query 913 -------------------------------------------------------------------------- 912
Sbjct 1775 TAGCAACAACCATCTCTGTACCCTCAAAAGTGAACTTGTTGAGGGCAAGACTTAGGTGTCCTATCACACTGAAT 1848
Query 913 -------------------------------------------------------------------------- 912
Sbjct 1849 CCCAGAGAAAGCAAACAAGATAGAATTAAATTGGCCTGTGTTTGTTCTTCAGCCTCCCCATCAGAGCTGAACTA 1922
Query 913 -------------------------------------------------------------------------- 912
Sbjct 1923 GAGATGACTCAAACACAAAATCATTAGGCTTCCTGGGGTTTGTGGTAAAATGGAATATGAGATATGCTAAAGAT 1996
Query 913 -------------------------------------------------------------------------- 912
Sbjct 1997 GTTTTCACTACAAAACACTCAAAATAACCAAATAAATATAATACCTTGATAATTTTGAACTTTACCTGAGCTAT 2070
Query 913 -------------------------------------------------------------------------- 912
Sbjct 2071 GTGATCCTATAATCCTCTTAAGAATCTAGGGTGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGA 2144
Query 913 ---- 912
Sbjct 2145 GGCA 2148
