Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_11240
• Subject: XR_002957191.1
• Aligned Length: 1550
• Identities: 873
• Gaps: 659

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACCGATCCGGGTCGCGGGGGCTCCTAGGGGGTTCCTTCCACAGCTGGTGCGCGTGCGCAAGAGTGCGTCGAGGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGTTCCGCGGCAATTTATGAAACTCGGAGCCGGCAGTGAGTTGAGGGTTCGGCGAGGTCAGGGATTCCTAGTTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGCGTGATTACCAACGCCAGCTCCCTTCACTGTCCAAGACAGCGATTCCGCGGCTCCTCTGAGAACTGGCGCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTGTTCATCATTTGCCACTTAAGCTACTTGCAGTCACGTCACACCTTGGATCTCTATCATCAAAACTATTCCAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTCGGAAATCTTACCTAAATGCAGCATGCCATCCTGAACGTCTCTCCCTGTCCTAGCTCTGTAACTGTTTACAT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGCTCAGGTACCTGAATATTGGCTTTGTGTCTAAAGTTTCTGGAACTTTCCTCCTTACCGTGAAATAACTTGGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTAAATCACACTGCATATAGTACACAGGTGCTTAGCTCAAGCCTGAGAATTACTGCAATCTAGTAAGGCGGATT  518

Query    1  ------------------------------ATGCAGCCTCTGAGCAAGTTGATGGCTATCTCAAAACCTCGAAA  44
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGAACTACTGTGGGAGTTCTATTTAGGAAGATGCAGCCTCTGAGCAAGTTGATGGCTATCTCAAAACCTCGAAA  592

Query   45  CCTGTCTCTACGTGAACAAAGAGAGGTTCTGAGAGCAGATATGTCTTGGCAGCAGGAAACCAACCCCGTCGTGG  118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCTGTCTCTACGTGAACAAAGAGAGGTTCTGAGAGCAGATATGTCTTGGCAGCAGGAAACCAACCCCGTCGTGG  666

Query  119  AGACACATGACTCTGAGGCATCTCGTCAAAAGTTCAGACATTTCCAGTATTTGAAAGTGTCTGGGCCCCATGAA  192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGACACATGACTCTGAGGCATCTCGTCAAAAGTTCAGACATTTCCAGTATTTGAAAGTGTCTGGGCCCCATGAA  740

Query  193  GCCCTGAGCCAACTCTGGGAGCTCTGTCTTCAATGGCTGAGACCAGAGATTCATACAAAGAAGCAGATTATAGA  266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GCCCTGAGCCAACTCTGGGAGCTCTGTCTTCAATGGCTGAGACCAGAGATTCATACAAAGAAGCAGATTATAGA  814

Query  267  ACTGTTGGTGCTGGAACAATTCCTGGCAATCCTGCCTGAAGAAGTCAGGACTTGGGTGAATTTACAACATCCAA  340
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ACTGTTGGTGCTGGAACAATTCCTGGCAATCCTGCCTGAAGAAGTCAGGACTTGGGTGAATTTACAACATCCAA  888

Query  341  ACAACAGTAAAGATATGGTGACCCTCATAGAAGATGTGATTGAAATGCTTGAAGATGAAGATATGCCCTGCAAG  414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ACAACAGTAAAGATATGGTGACCCTCATAGAAGATGTGATTGAAATGCTTGAAGATGAAGATATGCCCTGCAAG  962

Query  415  GACTCTGCCCTGCAGATGGGGAGCATCAAGGAGAAAATGAAAGCTGGCTCACGAACAGGCAAACCACAGGAACC  488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GACTCTGCCCTGCAGATGGGGAGCATCAAGGAGAAAATGAAAGCTGGCTCACGAACAGGCAAACCACAGGAACC  1036

Query  489  AGTGACATTCAAAGATGTGGTTGTGGAATTCAGCAAGGAAGAGTGGGGGCAACTGGACTCTGCTGTAAAGAACC  562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGTGACATTCAAAGATGTGGTTGTGGAATTCAGCAAGGAAGAGTGGGGGCAACTGGACTCTGCTGTAAAGAACC  1110

Query  563  TGTACAGGAATGTGATGCTGGAAAACTTTAGGAACCTGAATTCATTGCGTAAAGCACATCTACTTTCCAAACCA  636
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TGTACAGGAATGTGATGCTGGAAAACTTTAGGAACCTGAATTCATTGCGTAAAGCACATCTACTTTCCAAACCA  1184

Query  637  TTTGAGAGCCTTAAGTTGGAGAGTAAGAAAAAAAGATGGATAATGGAGAAAGAAATACCAAGGAAGACTATTTT  710
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TTTGAGAGCCTTAAGTTGGAGAGTAAGAAAAAAAGATGGATAATGGAGAAAGAAATACCAAGGAAGACTATTTT  1258

Query  711  TGACATGAAGAGTATTTCTGGAGAAGAATCATCCCATGGAGTGATTATGACAAGGCTTACCGAAAGTGGTCACC  784
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 1259  TGACATGAAGAGTATTTCTGGAGAAGAATCATCCCATGGAGTGATTATGACAAGGCTTACCGAAAGTGGACACC  1332

Query  785  CTTCTTCAGATGCCTGGAAAGATGGAGTTTCCCTCT-------------TGTTGCCCAGG-----------CTG  834
            |||||||||||||||||||||  |||| ..|.|.||             ||      |||           |||
Sbjct 1333  CTTCTTCAGATGCCTGGAAAG--GGAG-AACACACTGAAGGAAGCAGAATG------AGGGGCACTAAGCACTG  1397

Query  835  GAGTATAATGAT-------GCAGTCTCGGCTCACTGCAACC-------TC---CACCTCTGGGTTCAAGTGATT  891
            .||.|.|| |||       ||||.|||.||   |||  |||       ||   |||.|||.|||  ||   |.|
Sbjct 1398  CAGGAGAA-GATGGGGATGGCAGACTCAGC---CTG--ACCAAAGAAATCAATCACATCTTGGT--AA---ACT  1460

Query  892  CTCCTGCCTCAGCCTCCTGAG-------------------------------------------------  912
            .|||.||||||.|.| .||||                                                 
Sbjct 1461  TTCCAGCCTCATCAT-GTGAGAAAAGTGTTTTCATCAACACCCTGACTTTAATCCTGGACAAGCTGCCTG  1529