Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11275
Subject:
XM_017002555.2
Aligned Length:
3515
Identities:
1978
Gaps:
1516

Alignment

Query    1  ATGGAAGAAGTTAGGTGTCCAGAGCACGGGACTTTCTGCTTTCTTAAGACCGGCGTCCGCGATGGCCCGAATAA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGAAGAAGTTAGGTGTCCAGAGCACGGGACTTTCTGCTTTCTTAAGACCGGCGTCCGCGATGGCCCGAATAA  74

Query   75  AGGAAAGAGCTTCTACGTGTGCCGGGCAGACACGTGCAGCTTCGTGCGGGCCACCGACATTCCTGTTTCCCATT  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AGGAAAGAGCTTCTACGTGTGCCGGGCAGACACGTGCAGCTTCGTGCGGGCCACCGACATTCCTGTTTCCCATT  148

Query  149  GCTTATTGCATGAGGACTTTGTGGTAGAGCTTCAGGGTTTGCTTCTGCCACAGGACAAGAAAGAATACAGATTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCTTATTGCATGAGGACTTTGTGGTAGAGCTTCAGGGTTTGCTTCTGCCACAGGACAAGAAAGAATACAGATTG  222

Query  223  TTCTTCCGATGCATTAGAAGTAAGGCAGAGGGGAAACGCTGGTGTGGAAGTATTCCATGGCAGGATCCTGATTC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTCTTCCGATGCATTAGAAGTAAGGCAGAGGGGAAACGCTGGTGTGGAAGTATTCCATGGCAGGATCCTGATTC  296

Query  297  CAAAGAACATTCTGTATCCAATAAGTCTCAGCATGCATCTGAGACATTTCATCATTCTTCCAACTGGCTGAGAA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAAAGAACATTCTGTATCCAATAAGTCTCAGCATGCATCTGAGACATTTCATCATTCTTCCAACTGGCTGAGAA  370

Query  371  ATCCATTCAAGGTACTTGACAAGAATCAAGAACCAGCTCTCTGGAAACAGCTCATCAAAGGTGAAGGTGAGGAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATCCATTCAAGGTACTTGACAAGAATCAAGAACCAGCTCTCTGGAAACAGCTCATCAAAGGTGAAGGTGAGGAA  444

Query  445  AAGAAGGCTGATAAGAAGCAAAGAGAAAAGGGAGATCAGCTTTTCGATCAAAAGAAAGAACAGAAGCCTGAAAT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAGAAGGCTGATAAGAAGCAAAGAGAAAAGGGAGATCAGCTTTTCGATCAAAAGAAAGAACAGAAGCCTGAAAT  518

Query  519  GATGGAGAAAGACCTCTCATCTGGCCTGGTACCAAAGAAAAAACAATCTGTAGTTCAAGAGAAGAAGCAAGAAG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GATGGAGAAAGACCTCTCATCTGGCCTGGTACCAAAGAAAAAACAATCTGTAGTTCAAGAGAAGAAGCAAGAAG  592

Query  593  AGGGAGCAGAGATTCAGTGTGAGGCAGAGACTGGAGGCACACACAAAAGAGACTTTTCTGAAATTAAATCTCAA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGGGAGCAGAGATTCAGTGTGAGGCAGAGACTGGAGGCACACACAAAAGAGACTTTTCTGAAATTAAATCTCAA  666

Query  667  CAGTGCCAAGGTAATGAGCTTACAAGACCATCTGCATCTTCTCAGGAGAAATCAAGTGGTAAGAGTCAAGATGT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CAGTGCCAAGGTAATGAGCTTACAAGACCATCTGCATCTTCTCAGGAGAAATCAAGTGGTAAGAGTCAAGATGT  740

Query  741  CCAAAGAGAATCAGAACCTCTGAGAGAAAAGGTTACCCAGCTTTTGCCTCAAAATGTTCACAGTCACAACTCAA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCAAAGAGAATCAGAACCTCTGAGAGAAAAGGTTACCCAGCTTTTGCCTCAAAATGTTCACAGTCACAACTCAA  814

Query  815  TAAGCAAGCCCCAGAAAGGGGGACCCCTCAACAAGGAGTACACGAACTGGGAGGCTAAAGAAACAAAGGCAAAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TAAGCAAGCCCCAGAAAGGGGGACCCCTCAACAAGGAGTACACGAACTGGGAGGCTAAAGAAACAAAGGCAAAG  888

Query  889  GATGGCCCTAGCATACAGGCCACCCAGAAAAGCCTGCCTCAGGGGCATTTCCAAGAGCGGCCGGAGACCCACAG  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GATGGCCCTAGCATACAGGCCACCCAGAAAAGCCTGCCTCAGGGGCATTTCCAAGAGCGGCCGGAGACCCACAG  962

Query  963  TGTGCCTGCTCCTGGAGGACCAGCGGCTCAGGCTGCACCAGCAGCACCAGGGCTTTCCCTGGGTGAGGGCCGTG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGTGCCTGCTCCTGGAGGACCAGCGGCTCAGGCTGCACCAGCAGCACCAGGGCTTTCCCTGGGTGAGGGCCGTG  1036

Query 1037  AAGCTGCCACAAGCAGTGACGACGAGGAGGAAGATGATGTTGTTTTTGTTTCCTCTAAGCCTGGGAGCCCCCTA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AAGCTGCCACAAGCAGTGACGACGAGGAGGAAGATGATGTTGTTTTTGTTTCCTCTAAGCCTGGGAGCCCCCTA  1110

Query 1111  CTCTTTGACTCGACTCTGGACTTAGAGACGAAGGAAAACCTCCAATTCCCTGATCGAAGTGTGCAAAGAAAGGT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CTCTTTGACTCGACTCTGGACTTAGAGACGAAGGAAAACCTCCAATTCCCTGATCGAAGTGTGCAAAGAAAGGT  1184

Query 1185  GTCTCCTGCCTCAGGTGTTTCCAAGAAGGTAGAACCCTCAGACCCAGTAGCCCGGCGTGTCTACCTTACAACAC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GTCTCCTGCCTCAGGTGTTTCCAAGAAGGTAGAACCCTCAGACCCAGTAGCCCGGCGTGTCTACCTTACAACAC  1258

Query 1259  AACTGAAACAAAAGAAGAGCACACTGGCATCAGTGAACATCCAGGCTCTTCCAGACAAGGGTCAGAAGTTGATC  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AACTGAAACAAAAGAAGAGCACACTGGCATCAGTGAACATCCAGGCTCTTCCAGACAAGGGTCAGAAGTTGATC  1332

Query 1333  AAACAAATCCAGGAGCTGGAGGAAGTACTCAGTGGTCTTACCCTTTCCCCAGAGCAAGGAACTAATGAGAAGAG  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AAACAAATCCAGGAGCTGGAGGAAGTACTCAGTGGTCTTACCCTTTCCCCAGAGCAAGGAACTAATGAGAAGAG  1406

Query 1407  TAACAGTCAAGTACCACAGCAGAGTCACTTCACCAAAACTACCACTGGCCCTCCCCACCTGGTGCCTCCCCAAC  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TAACAGTCAAGTACCACAGCAGAGTCACTTCACCAAAACTACCACTGGCCCTCCCCACCTGGTGCCTCCCCAAC  1480

Query 1481  CCCTTCCTCGTCGTGGTACCCAACCTGTGGGTTCTCTAGAACTAAAGTCTGCCTGCCAGGTGACTGCTGGAGGA  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CCCTTCCTCGTCGTGGTACCCAACCTGTGGGTTCTCTAGAACTAAAGTCTGCCTGCCAGGTGACTGCTGGAGGA  1554

Query 1555  TCCAGTCAGTGCTATCGAGGCCATACAAACCAAGATCACGTTCATGCAGTGTGGAAAATCACAAGTGAAGCCAT  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TCCAGTCAGTGCTATCGAGGCCATACAAACCAAGATCACGTTCATGCAGTGTGGAAAATCACAAGTGAAGCCAT  1628

Query 1629  CGGTCAACTGCATCGCTCACTTGAGTCATGTCCTGGTGAGACGGTTGTGGCAGAAGATCCCGCCGGGCTGAAGG  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CGGTCAACTGCATCGCTCACTTGAGTCATGTCCTGGTGAGACGGTTGTGGCAGAAGATCCCGCCGGGCTGAAGG  1702

Query 1703  TCCCTTTGCTACTACACCAGAAGCAGGCATTGGCTTGGTTACTATGGCGAGAAAGTCAGAAGCCACAAGGAGGA  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TCCCTTTGCTACTACACCAGAAGCAGGCATTGGCTTGGTTACTATGGCGAGAAAGTCAGAAGCCACAAGGAGGA  1776

Query 1777  ATTCTGGCAGATGATATGGGCTTAGGAAAAACCCTGACAATGATTGCGCTCATCCTGACCCAGAAGAATCAAGA  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  ATTCTGGCAGATGATATGGGCTTAGGAAAAACCCTGACAATGATTGCGCTCATCCTGACCCAGAAGAATCAAGA  1850

Query 1851  GAAAAAGGAAGAAAAGGAGAAAAGCACAGCTTTGACGTGGCTCTCCAAAGATGGTAGACAGAAGTGCCTTAA--  1922
            ||||||||||||||||||||||||||||||||||||||||||||||||||||    |||....|||.|||.|  
Sbjct 1851  GAAAAAGGAAGAAAAGGAGAAAAGCACAGCTTTGACGTGGCTCTCCAAAGAT----GACTCTTGTGACTTTACT  1920

Query 1923  ---------------------TAGCCTGCCATTCCC---TACGTCATTTGAGCCACCCAA---GAGG----GGA  1965
                                 |..||||||  ||||   |.|.|||||.||       ||   ||||    |.|
Sbjct 1921  TCCCATGGAACACTAATCATCTGTCCTGCC--TCCCTGATCCATCATTGGA-------AAAATGAGGTGGAGAA  1985

Query 1966  AC--GTCTTCAGCTAAAAA--AGGACACCTTTGGTCATATTTAATTACTCTAC--TGG--AAAACCAGTAT---  2028
            ||  ||...||||.|.|||  |.||        ||| |||       ||||||  |||  .|||||.|.||   
Sbjct 1986  ACGGGTGAACAGCAACAAACTAAGA--------GTC-TAT-------CTCTACCATGGGCCAAACCGGGATTCA  2043

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 2044  CGTGCCAGAGTCCTCTCTACATATGACATCGTGATCACTACCTATAGCCTCGTGGCCAAGGAGATTCCCACAAA  2117

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 2118  CAAGCAAGAGGCAGAGATCCCAGGTGCAAACCTCAATGTGGAGGGCACCTCAACACCTTTGCTTCGAATAGCCT  2191

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 2192  GGGCTCGAATCATATTGGATGAAGCTCACAATGTTAAGAATCCCCGAGTGCAGACTTCCATAGCTGTGTGTAAG  2265

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 2266  CTACAAGCCTGTGCCCGTTGGGCTGTCACTGGAACCCCCATTCAAAACAACTTATTGGATATGTATTCGCTGCT  2339

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 2340  GAAGTTTCTCCGTTGCTCTCCATTTGATGAGTTCAATCTGTGGAGGAGTCAGGTTGACAATGGCTCAAAGAAAG  2413

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 2414  GAGGAGAACGGTTAAGTATTTTAACCAAGAGCCTTTTGCTGAGGAGAACAAAAGACCAGCTGGACTCTACTGGC  2487

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 2488  AGACCTTTGGTGATACTGCCCCAGCGTAAATTTCAGTTGCACCATTTAAAGCTTTCTGAAGATGAAGAGACTGT  2561

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 2562  TTACAATGTGTTTTTTGCAAGATCAAGGTCAGCTCTGCAATCCTATCTAAAAAGACATGAAAGTAGAGGCAACC  2635

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 2636  AATCTGGAAGAAGCCCTAATAATCCATTCAGTAGAGTGGCACTGGAGTTTGGGTCTGAGGAGCCTAGACACTCG  2709

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 2710  GAGGCAGCAGACTCACCGAGATCCAGCACCGTCCACATACTGTCCCAGTTGCTGAGACTCCGCCAGTGTTGCTG  2783

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 2784  TCATCTTTCTTTACTGAAGTCGGCCCTGGATCCAATGGAACTGAAGGGTGAAGGTCTTGTCCTTTCCCTGGAAG  2857

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 2858  AACAGCTCAGTGCTTTGACCTTGTCAGAACTCCGTGACTCAGAGCCATCTTCCACTGTTTCCCTTAACGGCACC  2931

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 2932  TTCTTCAAGATGGAGCTTTTTGAAGGCATGCGAGAGAGCACCAAGATTTCATCTCTGTTGGCAGAATTGGAGGC  3005

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 3006  AATTCAAAGAAATTCAGCATCCCAAAAGAGTGTCATTGTCTCTCAGTGGACCAACATGCTGAAAGTTGTAGCAT  3079

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 3080  TGCACCTGAAGAAGCATGGACTGACTTATGCCACCATCGATGGCTCTGTCAATCCCAAGCAGAGAATGGACTTG  3153

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 3154  GTAGAGGCATTTAACCACTCCAGAGGCCCTCAGGTAATGCTAATCTCTCTCTTGGCCGGAGGTGTTGGTCTAAA  3227

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 3228  CCTGACTGGAGGAAATCACCTCTTTCTTTTGGACATGCACTGGAATCCATCACTTGAAGATCAAGCTTGTGACC  3301

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 3302  GAATTTACCGAGTAGGGCAGCAGAAAGATGTTGTCATACACAGATTTGTTTGTGAGGGAACAGTAGAAGAAAAG  3375

Query 2029  --------------------------------------------------------------------------  2028
                                                                                      
Sbjct 3376  ATCTTACAGCTCCAAGAAAAAAAGAAAGATTTGGCCAAACAAGTTCTATCAGGGTCTGGAGAATCTGTCACCAA  3449

Query 2029  -------------------------------------  2028
                                                 
Sbjct 3450  GCTCACCTTGGCTGACCTCAGAGTCCTTTTTGGCATC  3486

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