Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11286
- Subject:
- XM_017316034.1
- Aligned Length:
- 3975
- Identities:
- 2128
- Gaps:
- 1647
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGGACCCTTCGTCCAGCGAAGAGGAGTCAGATGAGATCCTGGAAGAGGAGAGGGGCAAGGATGTGCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCGGCCGCGTCTGGAGCGCGCCTGTCTCCCAGCCGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGATGGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGTGGCGCCGGGGCCGGGGTGGGCGCCGGCGGCGGTGGGGGTAGCGGCGCGAGCAGCGGCGGCGGGGCCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCTGCAGCCCAGCAGCCGCGCCGGCGGCGGCCGGCCTTCCAGCCCTAGCCCGTCGGTGGTGAGCGAGAAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGGAAGAGTTGGAGAGGCTGCAGAAGGAGGAGGAAGAGAGGAAGAAGAGGCTGCAGCTGTACGTGTTCGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCGCTGCATCGCCTACCCCTTCAACGCCAAGCAGCCCACCGACATGGCTCGGCGGCAGCAGAAGATCAGCAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGCAGCTACAGACTGTCAAAGACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAATCGTAGCTGATGAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTTATGAATGCTGTCCAGAGCTACTATGAGGTGTTTCTCAAGAGTGACCGTGTGGCCCGCATGGTGCAGAGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGCTGCTCAGCCAATGACTCTCGGGAGGTCTTCAAGAAACACATCGAGAAGAGGGTGCGCAGCCTACCTGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGACGGCCTCAGCAAGGAGACAGTGCTAAGCTCTTGGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACCCCAGGAAGCAGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGTTGATTCTGAGCAAGGAACAGCTCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGAGATGTTTCAGAACATTCTTGGGATCAAGAAGTTTGAACATCAACTCCTGTATAATGCCTGTCAGCTGGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCCAGATGAGCAGGCAGCCCAGATCAGACGAGAGCTGGATGGACGTCTCCAAATGGCAGATCAAATAGCCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAACGCAAATTTCCTAAGTTCGTATCCAAAGAAATGGAAAACATGTACATTGAGGAGCTGAAGTCCTCCGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTGCTCATGGCCAACTTGGAGAGCATGCCGGTGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGAAACGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTCACAATGCTTCCATCATTGACATGGGTGAGGAGAGTGAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTCTCCTTGGAGGTGGTGATCATGGAAGTCCAAGGCCTTAAGTCCTTGGCTCCAAATCGAATTGTATACTGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAATGGAGGTGGAGGGTGGAGAGAAACTTCAGACAGATCAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCGACTTCTCCACAACCCATGCGCTGCCAGCTGTTAAAGTAAAACTATTCACAGAGAGCACTGGTGTCCTGGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTGGAAGACAAGGAACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAATGACAGTCTCCAAAAACTGCCCCGATCAAGACCTCAAAATCAAACTTGCTGTCCGAATGGATAAGCCTCAA 1554
Query 1 ---ATGAAGCATTCTGGGTATTTATGGGCCATCGGTAAGAATGTCTGGAAGAGATGGAAGAAAAGGTTTTTTGT 71
||||||||.||||||||.||||||.||||.|||||||||||.||||||||.||||||||.|||||.|||||
Sbjct 1555 AACATGAAGCACTCTGGGTACTTATGGACCATTGGTAAGAATGTGTGGAAGAGGTGGAAGAAGAGGTTCTTTGT 1628
Query 72 ATTGGTGCAGGTCAGTCAGTACACGTTTGCCATGTGCAGTTATCGGGAGAAGAAAGCGGAGCCTCAGGAACTTC 145
.||||||||||||||.||||||||.||||||||||||||.|||||.||.|||||.||.||||||||||||||.|
Sbjct 1629 GTTGGTGCAGGTCAGCCAGTACACTTTTGCCATGTGCAGCTATCGAGAAAAGAAGGCAGAGCCTCAGGAACTCC 1702
Query 146 TACAATTGGATGGCTACACTGTGGATTACACCGACCCCCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT 219
||||..||||.||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1703 TACAGCTGGACGGCTACACCGTGGATTACACCGACCCTCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT 1776
Query 220 GCTGTCAAGGAGGGAGACACCGTGATATTTGCCAGTGACGATGAACAAGACCGCATCCTGTGGGTCCAGGCCAT 293
||.|||||.||.||||||||.|||||||||||.|||||.|||||||||||.||.||..||||||||||.||.||
Sbjct 1777 GCAGTCAAAGAAGGAGACACGGTGATATTTGCAAGTGATGATGAACAAGATCGAATTTTGTGGGTCCAAGCTAT 1850
Query 294 GTATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAACGCCAAGGGAGGAA 367
|||..|||||||.||.|||||.|||||.|||||.|||||.|||||.||.|||||.||||||||||||||.||||
Sbjct 1851 GTACAGGGCCACTGGCCAGTCGCACAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAA 1924
Query 368 ATGTACCTCAGCTGGATGCCCCTATCTCTCAATTTTACGCAGATAGAGCTCAAAAACATGGCATGGATGAATTT 441
||||.|||||||||||||||||.|||||.|||||||||||||||||||||||.||.||||||||||||||||||
Sbjct 1925 ATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTACGCAGATAGAGCTCAGAAGCATGGCATGGATGAATTT 1998
Query 442 ATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTACAACGCCTTACTTTGGATCACAG 515
||||||||||||||||||||||||||||||||||||||||||||||||||.||.||.||.||||||||||||||
Sbjct 1999 ATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTGCAGCGGCTGACTTTGGATCACAG 2072
Query 516 ACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTACTAGACGAGTATTGCGCCC 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||.||||||||||||.
Sbjct 2073 ACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTGTTAGATGAGTATTGCGCCA 2146
Query 590 GAAATGGAGTCCGGGGGTGTCACCGACATCTCTGCTACCTCAGAGACTTGCTTGAACGGGCAGAAAATGGCGCC 663
|||||||||||||.||.||||||||.||||||||||||||.|||||||||||.|||||.||||||||||||||.
Sbjct 2147 GAAATGGAGTCCGAGGATGTCACCGGCATCTCTGCTACCTTAGAGACTTGCTGGAACGAGCAGAAAATGGCGCG 2220
Query 664 ATGATCGACCCCACCCTTCTTCACTACAGCTTTGCCTTCTGTGCATCCCATGTCCATGGGAACAGGCCTGATGG 737
|||||.||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||
Sbjct 2221 ATGATTGACCCCACGCTTCTTCACTACAGCTTTGCCTTCTGCGCGTCCCATGTCCATGGTAACAGGCCTGATGG 2294
Query 738 AATTGGAACTGTGACTGTTGAAGAAAAGGAACGTTTTGAAGAAATCAAAGAGAGGCTCCGAGTTCTGCTAGAAA 811
|||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.||||||||||||||.||||
Sbjct 2295 AATCGGAACTGTGACTGTTGAAGAAAAAGAACGCTTTGAAGAAATCAAAGAGAGACTCCGAGTTCTGCTGGAAA 2368
Query 812 ATCAGATTACACATTTTAGGTATTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCTACTCTCTCACTC 885
||||.|||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ATCAAATTACACATTTCAGGTACTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCTACTCTCTCACTC 2442
Query 886 TTGGAAAGGGTTTTGATGAAAGATATTGTTACCCCAGTGCCACAAGAGGAGGTAAAAACAGTTATCCGTAAATG 959
||||||.||||||||||||||||||||||.||.|||||.||||||||.|||||.|||||.||.|||||||||||
Sbjct 2443 TTGGAACGGGTTTTGATGAAAGATATTGTCACTCCAGTACCACAAGAAGAGGTCAAAACTGTCATCCGTAAATG 2516
Query 960 TCTGGAACAGGCTGCGTTAGTCAACTATTCTCGGCTCTCAGAGTATGCCAAAATCGAAG--------------- 1018
.||.||.||||||||..||||||||||.||.||.||.||.||||||||||||||.||||
Sbjct 2517 CCTAGAGCAGGCTGCTCTAGTCAACTACTCACGCCTATCTGAGTATGCCAAAATTGAAGGGAAAAAGAGAGAAA 2590
Query 1019 ------------------------------------------------------AGAATCAAAAGGATGCAGAA 1038
||||||||||||||||||||
Sbjct 2591 TGTATGAGCATCCTGTCTTCTGCTTGGCCTCCCAAGTGATGGATTTAACCATTCAGAATCAAAAGGATGCAGAA 2664
Query 1039 AATGTAGGCCGGTTAATCACTCCTGCCAAAAAGCTTGAAGATACAATACGTCTTGCTGAACTAGTCATTGAAGT 1112
|||||||||||.|||||||||||.|||||||||||.|||||.|||||.||||||||||||||||||||.|||||
Sbjct 2665 AATGTAGGCCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAACTAGTCATCGAAGT 2738
Query 1113 TCTTCAGCAAAATGAGGAGCACCACGC---------------------AGAGGCCTTTGCGTGGTGGTCAGATT 1165
.||.||.|||||.|||||||||||||| |||.||||||||||||||||||||.|
Sbjct 2739 ACTGCAACAAAACGAGGAGCACCACGCCGAGCCACATGTTGATAAAGGAGAAGCCTTTGCGTGGTGGTCAGACT 2812
Query 1166 TAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTAGACATGGATGCAGCCTTAGAGGTGCAACCT 1239
|||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.
Sbjct 2813 TAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACATGGATGCAGCCTTAGAGGTGCAACCC 2886
Query 1240 CCAGACACATGGGACAGTTTTCCACTATTTCAGCTGCTGAATGATTTTCTCCGTACTGACTATAATTTGTGCAA 1313
||||||||.|||||||||||.|||||.||.||||||||||||||.|||||||||||.|||||||||||||||||
Sbjct 2887 CCAGACACGTGGGACAGTTTCCCACTCTTCCAGCTGCTGAATGACTTTCTCCGTACAGACTATAATTTGTGCAA 2960
Query 1314 TGGAAAATTTCACAAACACCTGCAAGACCTGTTTGCCCCACTTGTTGTTAGATATGTGGATCTGATGGAGTCCT 1387
||||||.|||||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 TGGAAAGTTTCACAAACACCTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGTGGATCTGATGGAGTCCT 3034
Query 1388 CAATTGCACAATCCATTCACAGGGGCTTTGAGCGGGAGTCATGGGAACCAGTCAATAATGGGTCAGGCACCTCA 1461
|.|||||||||||.||.|||||||||||||||||||||||||||||.||||||||||||||.|||||.||.|||
Sbjct 3035 CCATTGCACAATCTATCCACAGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAATAATGGATCAGGTACATCA 3108
Query 1462 GAAGATCTGTTTTGGAAACTTGACGCCCTTCAGACCTTCATTCGGGACCTGCACTGGCCTGAAGAAGAGTTTGG 1535
||||||.||||.|||||||||||.|||||||||||.|||||.||.|||||.|||||||||||.|||||||||||
Sbjct 3109 GAAGATTTGTTCTGGAAACTTGATGCCCTTCAGACTTTCATCCGTGACCTACACTGGCCTGAGGAAGAGTTTGG 3182
Query 1536 AAAGCACCTGGAACAACGGCTGAAGTTGATGGCAAGTGACATGATCGAATCTTGTGTCAAAAGAACCAGGATTG 1609
|||.|||.|.||.||.|||||.||..|||||||||||||||||||.||.||.||.|||||||||||||||||||
Sbjct 3183 AAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAGTGACATGATTGAGTCCTGCGTCAAAAGAACCAGGATTG 3256
Query 1610 CATTTGAAGTTAAGCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCACCATGTTT 1683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 CATTTGAAGTTAAGCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCACCATGTTT 3330
Query 1684 AATGTTATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGCATCAATACCA 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 AATGTTATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGCATCAATACCA 3404
Query 1758 TTCAAAAATAGACGAACTAATTGAAGAAACTGTTAAAGAAATGATAACACTCTTGGTTGCAAAGTTCGTTACTA 1831
||||||||||||.|||||||||||||||||.||||||||||||||.|||||.|||||.||||||||.||.||||
Sbjct 3405 TTCAAAAATAGATGAACTAATTGAAGAAACCGTTAAAGAAATGATCACACTTTTGGTGGCAAAGTTTGTAACTA 3478
Query 1832 TCTTGGAAGGAGTGCTGGCAAAATTATCCAGATATGACGAAGGGACTTTGTTTTCTTCTTTTCTGTCATTTACC 1905
|.||||||||.||.||||||||.|||||||||||||||||.|||||||||||||||||.|||||||||||.||.
Sbjct 3479 TATTGGAAGGCGTACTGGCAAAGTTATCCAGATATGACGAGGGGACTTTGTTTTCTTCGTTTCTGTCATTCACG 3552
Query 1906 GTGAAGGCAGCTTCCAAATATGTGGATGTACCTAAACCCGGGATGGACGTGGCCGACGCCTACGTGACTTTCGT 1979
|||||||||||||||||.||||||||.||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 GTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCCGACGCCTACGTGACTTTCGT 3626
Query 1980 CCGCCATTCTCAGGATGTCCTGCGTGATAAGGTCAATGGGGAGATGTACATAGAAAGGTTATTTGATCAATGGT 2053
|||||||||||||||||||||.||||||||||||||||.|||||||||.|||||||||||||||||||||||||
Sbjct 3627 CCGCCATTCTCAGGATGTCCTTCGTGATAAGGTCAATGAGGAGATGTATATAGAAAGGTTATTTGATCAATGGT 3700
Query 2054 ACAACAGCTCCATGAACGTGATCTGCACCTGGTTGACGGACCGGATGGACTTACAGCTTCATATTTATCAGTTG 2127
|||||||||||||||||.|.||||||||.|||.||||.|||.||||||||.|.|||||.||.|||||.|||.||
Sbjct 3701 ACAACAGCTCCATGAACATCATCTGCACGTGGCTGACCGACAGGATGGACCTGCAGCTCCACATTTACCAGCTG 3774
Query 2128 AAAACACTAATTAGGATGGTAAAGAAAACCTACAGAGATTTCCGATTGCAAGGGGTCCTGGACTCCACCTTAAA 2201
|||||.||.||.||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||
Sbjct 3775 AAAACCCTGATCAGGATGGTAAAGAAAACCTATAGAGATTTCCGATTGCAAGGGGTCCTGGATTCCACCTTAAA 3848
Query 2202 CAGCAAGACCTATGAAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGGGG 2275
|||||||||||||||.||.|||||.|||||||||||||||||||||||.|||||.|||||||||||.|||||||
Sbjct 3849 CAGCAAGACCTATGAGACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGGTGGGG 3922
Query 2276 GACTGCAGGGCATCAGCATGAAGGACAGCGATGAGGAAGACGAAGAAGACGAT 2328
|..|.||.||.|||||||||||||||||.|||||||||||.||||||||.|||
Sbjct 3923 GCTTACAAGGTATCAGCATGAAGGACAGTGATGAGGAAGATGAAGAAGATGAT 3975
