Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11311
- Subject:
- XR_923055.3
- Aligned Length:
- 5654
- Identities:
- 278
- Gaps:
- 5372
Alignment
Query 1 ------------------------------------------------ATGGATATGTTTCCTCTCACCTGGGT 26
||||||||||||||||||||||||||
Sbjct 1 AACAAGAAACCTACGAACCCAGCTCTGGAAAGAGCCACCTTCTCCAAAATGGATATGTTTCCTCTCACCTGGGT 74
Query 27 TTTCTTAGCCCTCTACTTTTCAAGACACCAAGTGAGAGGCCAACCAGACCCACCGTGCGGAGGTCGTTTGAATT 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TTTCTTAGCCCTCTACTTTTCAAGACACCAAGTGAGAGGCCAACCAGACCCACCGTGCGGAGGTCGTTTGAATT 148
Query 101 CCAAAGATGCTGGCTATATCACCTCTCCCGGTTACCCCCAGGACTACCCCTCCCACCAGAACTGCGAGTGGATT 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCAAAGATGCTGGCTATATCACCTCTCCCGGTTACCCCCAGGACTACCCCTCCCACCAGAACTGCGAGTGGATT 222
Query 175 GTTTACGCCCCCGAACCCAACCAGAAGATTGTCCTCAACTTCAACCCTCACTTTGAAATCGAGAAGCACGACTG 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTTTACGCCCCCGAACCCAACCAGAAGATTGTCCTCAACTTCAACCCTCACTTTGAAATCGAGAAGCACGACTG 296
Query 249 CAACTTGCTGTCTG-CTTGGAAAATTTC---ACTC---------AC----AAGCCGCAG--CTTTGCC------ 297
||| ||.|| ||| |.|| |.|| || ||.|||||| || ||
Sbjct 297 CAA------GTATGACTT------TATCGAGATTCGGGATGGGGACAGTGAATCCGCAGACCT---CCTGGGCA 355
Query 298 -------------------------------------------------------------------------- 297
Sbjct 356 AACACTGTGGGAACATCGCCCCGCCCACCATCATCTCCTCGGGCTCCATGCTCTACATCAAGTTCACCTCCGAC 429
Query 298 -------------------------------------------------------------------------- 297
Sbjct 430 TACGCCCGGCAGGGGGCAGGCTTCTCTCTGCGCTACGAGATCTTCAAGACAGGCTCTGAAGATTGCTCAAAAAA 503
Query 298 -------------------------------------------------------------------------- 297
Sbjct 504 CTTCACAAGCCCCAACGGGACCATCGAATCTCCTGGGTTTCCTGAGAAGTATCCACACAACTTGGACTGCACCT 577
Query 298 -------------------------------------------------------------------------- 297
Sbjct 578 TTACCATCCTGGCCAAACCCAAGATGGAGATCATCCTGCAGTTCCTGATCTTTGACCTGGAGCATGACCCTTTG 651
Query 298 -------------------------------------------------------------------------- 297
Sbjct 652 CAGGTGGGAGAGGGGGACTGCAAGTACGATTGGCTGGACATCTGGGATGGCATTCCACATGTTGGCCCCCTGAT 725
Query 298 -------------------------------------------------------------------------- 297
Sbjct 726 TGGCAAGTACTGTGGGACCAAAACACCCTCTGAACTTCGTTCATCGACGGGGATCCTCTCCCTGACCTTTCACA 799
Query 298 -------------------------------------------------------------------------- 297
Sbjct 800 CGGACATGGCGGTGGCCAAGGATGGCTTCTCTGCGCGTTACTACCTGGTCCACCAAGAGCCACTAGAGAACTTT 873
Query 298 -------------------------------------------------------------------------- 297
Sbjct 874 CAGTGCAATGTTCCTCTGGGCATGGAGTCTGGCCGGATTGCTAATGAACAGATCAGTGCCTCATCTACCTACTC 947
Query 298 -------------------------------------------------------------------------- 297
Sbjct 948 TGATGGGAGGTGGACCCCTCAACAAAGCCGGCTCCATGGTGATGACAATGGCTGGACCCCCAACTTGGATTCCA 1021
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1022 ACAAGGAGTATCTCCAGGTGGACCTGCGCTTTTTAACCATGCTCACGGCCATCGCAACACAGGGAGCGATTTCC 1095
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1096 AGGGAAACACAGAATGGCTACTATGTCAAATCCTACAAGCTGGAAGTCAGCACTAATGGAGAGGACTGGATGGT 1169
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1170 GTACCGGCATGGCAAAAACCACAAGGTATTTCAAGCCAACAACGATGCAACTGAGGTGGTTCTGAACAAGCTCC 1243
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1244 ACGCTCCACTGCTGACAAGGTTTGTTAGAATCCGCCCTCAGACCTGGCACTCAGGTATCGCCCTCCGGCTGGAG 1317
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1318 CTCTTCGGCTGCCGGGTCACAGATGCTCCCTGCTCCAACATGCTGGGGATGCTCTCAGGCCTCATTGCAGACTC 1391
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1392 CCAGATCTCCGCCTCTTCCACCCAGGAATACCTCTGGAGCCCCAGTGCAGCCCGCCTGGTTAGCAGCCGCTCGG 1465
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1466 GCTGGTTCCCTCGAATCCCTCAGGCCCAGCCCGGTGAGGAGTGGCTTCAGGTAGATCTGGGAACACCCAAGACA 1539
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1540 GTGAAAGGTGTCATCATCCAGGGAGCCCGCGGAGGAGACAGTATCACTGCTGTGGAAGCCAGAGCATTTGTGCG 1613
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1614 CAAGTTCAAAGTCTCCTACAGCCTAAACGGCAAGGACTGGGAATACATTCAGGACCCCAGGACCCAGCAGCCAA 1687
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1688 AGCTGTTCGAAGGGAACATGCACTATGACACCCCTGACATCCGAAGGTTTGACCCCATTCCGGCACAGTATGTG 1761
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1762 CGGGTATACCCGGAGAGGTGGTCGCCGGCGGGGATTGGGATGCGGCTGGAGGTGCTGGGCTGTGACTGGACAGA 1835
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1836 CTCCAAGCCCACGGTAGAGACGCTGGGACCCACTGTGAAGAGCGAAGAGACAACCACCCCCTACCCCACCGAAG 1909
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1910 AGGAGGCCACAGAGTGTGGGGAGAACTGCAGCTTTGAGGATGACAAAGATTTGCAGCTCCCTTCGGGATTCAAT 1983
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1984 TGCAACTTCGATTTCCTCGAGGAGCCCTGTGGTTGGATGTATGACCATGCCAAGTGGCTCCGGACCACCTGGGC 2057
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2058 CAGCAGCTCCAGCCCAAACGACCGGACGTTTCCAGATTGTGTTCGAGGGAGTGATAGGGAAAGGACGTTCCGGA 2131
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2132 GAGATTGCCATTGATGACATTCGGATAAGCACTGATGTCCCACTGGAGAACTGCATGGAACCCATCTCGGCTTT 2205
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2206 TGCAGTGGACATCCCAGAAATACATGAGAGAGAAGGATATGAAGATGAAATTGATGATGAATACGAGGTGGACT 2279
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2280 GGAGCAATTCTTCTTCTGCAACCTCAGGGTCTGGCGCCCCCTCGACCGACAAAGAAAAGAGCTGGCTGTACACC 2353
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2354 CTGGATCCCATCCTCATCACCATCATCGCCATGAGCTCACTGGGCGTCCTCCTGGGGGCCACCTGTGCAGGCCT 2427
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2428 CCTGCTCTACTGCACCTGTTCCTACTCGGGCCTGAGCTCCCGAAGCTGCACCACACTGGAGAACTACAACTTCG 2501
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2502 AGCTCTACGATGGCCTTAAGCACAAGGTCAAGATGAACCACCAAAAGTGCTGCTCCGAGGCATGACGGATTGCA 2575
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2576 CCTGAATCCTATCTGACGTTTCATTCCAGCAAGAGGGGCTGGGGAAGATTACATTTTTTTTTCCTTTGGAAACT 2649
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2650 GAATGCCATAATCTCGATCAAACCGATCCAGAATACCGAAGGTATGGACAGGACAGAAAAGCGAGTCGCAGGAG 2723
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2724 GAAGGGAGATGCAGCCGCACAGGGGATGATTACCCTCCTAGGACCGCGGTGGCTAAGTCATTGCAGGAACGGGG 2797
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2798 CTGTGTTCTCTGCTGGGACAAAACAGGAGCTCATCTCTTTGGGGTCACAGTTCTATTTTGTTTGTGAGTTTGTA 2871
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2872 TTATTATTATTATTATTATTATTATTATATTTTATTTCTTTGGTCTGTGAGCAACTCAAAGAGGCAGAAGAGGA 2945
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2946 GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTCTTTCTAATCAACACTTGAAA 3019
Query 298 -------------------------------------------------------------------------- 297
Sbjct 3020 AGCAAAGTGTCTTTTCAGCCTTTCCATCTTTACAAATAAAACTCAAAAAAGCCGTCCAGCTTATCCCATCCTCT 3093
Query 298 -------------------------------------------------------------------------- 297
Sbjct 3094 GATTGTCTTCTGACTTAAGGGATTTACTGTGGTGTAGGTTCTGCCAGCCAACCCTACAAGCTGCCATTTCCAGT 3167
Query 298 -------------------------------------------------------------------------- 297
Sbjct 3168 CCTAGCATTTAAGTAGGATGTTGTTGCCTTTAACTTTTCTTATCCAGGGGAAAATTGCCATTTTAGGGTCAGCA 3241
Query 298 -------------------------------------------------------------------------- 297
Sbjct 3242 TGAACAGCTCTTTCTTGTATGCGATTTAAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCG 3315
Query 298 -------------------------------------------------------------------------- 297
Sbjct 3316 CCTGGACGAGGCTTAAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG 3389
Query 298 -------------------------------------------------------------------------- 297
Sbjct 3390 TGGGGCTTCCCTTGTGGGGCTTCTGGTGGTGGTTTTGCCTTTTCTTTTCCCTCCTCCATGTTCTTCTAAAACAT 3463
Query 298 -------------------------------------------------------------------------- 297
Sbjct 3464 ATACATATATACATACACACATACACATATTCTTCAGGTCTCTAAGCCCCTGGAAGCAGCATTGTGTGATATTC 3537
Query 298 -------------------------------------------------------------------------- 297
Sbjct 3538 TCAGAGGCAGGGGAAAATAGAGGGAAAAATAGAGACTATTGGTATGTTCTCCCCATCAGCGAGTTATTGTAACT 3611
Query 298 -------------------------------------------------------------------------- 297
Sbjct 3612 GGTCACCACTGGACGGGAAGGAGAACAGAGGAGAGGGAAAGAGAAGCCCAACCTCTGTGATCATATGAGGGCCA 3685
Query 298 -------------------------------------------------------------------------- 297
Sbjct 3686 AGGCTGAGCAGTGTAGACAGAGACCCTTTGAAATGCATTTGTCTCTCAAATAGACTAGTAAACACCGACTTCTC 3759
Query 298 -------------------------------------------------------------------------- 297
Sbjct 3760 CTTTGGGTTACAAACACCATTTCAACCTTTCGGGAGAGTCAGAGCTAGGATGTACAAGAACTGATTCTAACCAG 3833
Query 298 -------------------------------------------------------------------------- 297
Sbjct 3834 AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAGAGACCTAGGTTCTTACACAT 3907
Query 298 -------------------------------------------------------------------------- 297
Sbjct 3908 ATGCACACACGCATACACACATGCACGCACACACACATACACACATGCACGCACGCACGCATGCACACCAATTT 3981
Query 298 -------------------------------------------------------------------------- 297
Sbjct 3982 ATGTTTTTATTAAGTGCCTTGAAAAAATGAAGAAAAATGTATTTTCCCTTTATGTAAAAATTAGTGAATATCTT 4055
Query 298 -------------------------------------------------------------------------- 297
Sbjct 4056 ATGAATTAAGGCATTCCTCTTTCCCTAACCCCGATGGCTCCATTCCCAAGTACCCCAACTCACTGCTGATCCTA 4129
Query 298 -------------------------------------------------------------------------- 297
Sbjct 4130 TTAAAGGAATGAGTCCTGCTACCCGAGTGGTAGTCATAGCCCTAGATGACTCTCAACTACTCTTCAAAGGGAGG 4203
Query 298 -------------------------------------------------------------------------- 297
Sbjct 4204 CATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCAAATCTTGATTTCATATTAA 4277
Query 298 -------------------------------------------------------------------------- 297
Sbjct 4278 CGCCTAAGGATTGCCTGTGTGCTGGAAATATATTTGAAACTCAACCAGTATGCCCAGCCTATTGCATATCATTG 4351
Query 298 -------------------------------------------------------------------------- 297
Sbjct 4352 TCAGACCATTTTTGCTGCTGTGGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAAT 4425
Query 298 -------------------------------------------------------------------------- 297
Sbjct 4426 GGGACTGGCTGGTTCCTTTAAATGTTAACTTATGGAAATGCTAGTTCAAATGGTAATGTCACAGTGTTTTGTAT 4499
Query 298 -------------------------------------------------------------------------- 297
Sbjct 4500 GCAGAGAGCAAGAGTTCAACCAACAGCTGTTTATTCATGTGTGTGTGTCTTTGCTGCTTTGAGTTCTCTGTATC 4573
Query 298 -------------------------------------------------------------------------- 297
Sbjct 4574 TACTGTGTATGTGAATGGTCATGTGGGACTCAGTGGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAG 4647
Query 298 -------------------------------------------------------------------------- 297
Sbjct 4648 CTGATCTTGGCACTCGGCACTCATTGGCACAGTGGTAGTTAGAGGTGAAAAGTAGAGCTGTCAAGCCCAAGGGC 4721
Query 298 -------------------------------------------------------------------------- 297
Sbjct 4722 TTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAGAAGCAAGATTTTAACTAGCCCCTTTTCCTCTTCACC 4795
Query 298 -------------------------------------------------------------------------- 297
Sbjct 4796 CTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAA 4869
Query 298 -------------------------------------------------------------------------- 297
Sbjct 4870 GTTTGAAAGCCACTCCAGGGGTCCTGATGCTGTCATGCTCAGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCC 4943
Query 298 -------------------------------------------------------------------------- 297
Sbjct 4944 CTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAACTCAACCTGCATCCCTCTAAAAGTCCTATATCCAT 5017
Query 298 -------------------------------------------------------------------------- 297
Sbjct 5018 ATTCACCATTGGCTAATTTGAGGCCCTGAGTGGGCCTTGAATGCTAAAAAGAAGCAGGGTACGCAGGGCTACAT 5091
Query 298 -------------------------------------------------------------------------- 297
Sbjct 5092 GTAGATACCACACCAAGGCTGGAGGCTGGTCTGTCATAAGACAGAAAGAAAGACGCTGGGCCCAATTTTGACTT 5165
Query 298 -------------------------------------------------------------------------- 297
Sbjct 5166 GGCCAGGGGACACCTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTGAGTCATT 5239
Query 298 -------------------------------------------------------------------------- 297
Sbjct 5240 CCCTTTGGGAAACCCCACTGCCAGTATTGATCTCCTTTTTGCCTTGTACTGAATGACACATTACCTCCACACTC 5313
Query 298 -------------------------------------------------------------------------- 297
Sbjct 5314 TCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCTGTCTTTGGTGGGGCAGGGGAGTTGACAGGGATG 5387
Query 298 -------------------------------------------------------------------------- 297
Sbjct 5388 AGGGTCCAAGGAATAAGCATGAATGACAAGAAAACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTT 5461
Query 298 -------------------------------------------------------------------------- 297
Sbjct 5462 TTCAGGGTTTGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGAGAGCTTTTACT 5535
Query 298 -------------------------------------------------------------------------- 297
Sbjct 5536 GTGATTCTTCAATGTAAAAAATAAACAACAATGTCAAACTGTGTTTATATGATTTGTATAAAGCCTTTTTAAGA 5609
Query 298 ------------------------------ 297
Sbjct 5610 TTACTATTTAAATAAACATTATACCAGAGA 5639
